{"id":"https://openalex.org/W2499728294","doi":"https://doi.org/10.1007/978-3-319-43681-4_3","title":"An Efficient Branch and Cut Algorithm to Find Frequently Mutated Subnetworks in Cancer","display_name":"An Efficient Branch and Cut Algorithm to Find Frequently Mutated Subnetworks in Cancer","publication_year":2016,"publication_date":"2016-01-01","ids":{"openalex":"https://openalex.org/W2499728294","doi":"https://doi.org/10.1007/978-3-319-43681-4_3","mag":"2499728294"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-319-43681-4_3","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-43681-4_3","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5082664968","display_name":"Anna Bomersbach","orcid":null},"institutions":[{"id":"https://openalex.org/I177969490","display_name":"University of Southern Denmark","ror":"https://ror.org/03yrrjy16","country_code":"DK","type":"education","lineage":["https://openalex.org/I177969490"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Anna Bomersbach","raw_affiliation_strings":["Department of Mathematics and Computer Science, University of Southern Denmark, Odense, Denmark"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Mathematics and Computer Science, University of Southern Denmark, Odense, Denmark","institution_ids":["https://openalex.org/I177969490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016923663","display_name":"Marco Chiarandini","orcid":"https://orcid.org/0000-0002-6136-8496"},"institutions":[{"id":"https://openalex.org/I177969490","display_name":"University of Southern Denmark","ror":"https://ror.org/03yrrjy16","country_code":"DK","type":"education","lineage":["https://openalex.org/I177969490"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Marco Chiarandini","raw_affiliation_strings":["Department of Mathematics and Computer Science, University of Southern Denmark, Odense, Denmark"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Mathematics and Computer Science, University of Southern Denmark, Odense, Denmark","institution_ids":["https://openalex.org/I177969490"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5060279781","display_name":"Fabio Vandin","orcid":"https://orcid.org/0000-0003-2244-2320"},"institutions":[{"id":"https://openalex.org/I138689650","display_name":"University of Padua","ror":"https://ror.org/00240q980","country_code":"IT","type":"education","lineage":["https://openalex.org/I138689650"]},{"id":"https://openalex.org/I177969490","display_name":"University of Southern Denmark","ror":"https://ror.org/03yrrjy16","country_code":"DK","type":"education","lineage":["https://openalex.org/I177969490"]},{"id":"https://openalex.org/I27804330","display_name":"Brown University","ror":"https://ror.org/05gq02987","country_code":"US","type":"education","lineage":["https://openalex.org/I27804330"]}],"countries":["DK","IT","US"],"is_corresponding":false,"raw_author_name":"Fabio Vandin","raw_affiliation_strings":["Department of Computer Science, Brown University, Providence, USA","Department of Information Engineering, University of Padova, Padova, Italy","Department of Mathematics and Computer Science, University of Southern Denmark, Odense, Denmark"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Brown University, Providence, USA","institution_ids":["https://openalex.org/I27804330"]},{"raw_affiliation_string":"Department of Information Engineering, University of Padova, Padova, Italy","institution_ids":["https://openalex.org/I138689650"]},{"raw_affiliation_string":"Department of Mathematics and Computer Science, University of Southern Denmark, Odense, Denmark","institution_ids":["https://openalex.org/I177969490"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":2.4494,"has_fulltext":false,"cited_by_count":9,"citation_normalized_percentile":{"value":0.88831437,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"27","last_page":"39"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.996399998664856,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10583","display_name":"Cancer-related Molecular Pathways","score":0.9890999794006348,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7824040651321411},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5125417709350586},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.34963685274124146}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7824040651321411},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5125417709350586},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.34963685274124146}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/978-3-319-43681-4_3","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-43681-4_3","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:sdu.dk:openaire_cris_publications/fd6f4c44-0bb5-4161-90e6-dad51a3194a7","is_oa":false,"landing_page_url":"https://portal.findresearcher.sdu.dk/da/publications/fd6f4c44-0bb5-4161-90e6-dad51a3194a7","pdf_url":null,"source":{"id":"https://openalex.org/S4306400423","display_name":"University of Southern Denmark Research Portal (University of Southern Denmark)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I177969490","host_organization_name":"University of Southern Denmark","host_organization_lineage":["https://openalex.org/I177969490"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bomersbach, A, Chiarandini, M & Vandin, F 2016, An Efficient Branch and Cut Algorithm to Find Frequently Mutated Subnetworks in Cancer. in M Frith & C N\u00f8rgaard Storm Pedersen (eds), Algorithms in Bioinformatics : Proceedings of the16th International Workshop, WABI. Springer, Lecture Notes in Computer Science, vol. 9838, pp. 27-39, 16th Workshop on Algorithms in Bioinformatics, Aarhus, Denmark, 22/08/2016. https://doi.org/10.1007/978-3-319-43681-4_3","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:www.research.unipd.it:11577/3222109","is_oa":false,"landing_page_url":"http://hdl.handle.net/11577/3222109","pdf_url":null,"source":{"id":"https://openalex.org/S4377196283","display_name":"Research Padua  Archive (University of Padua)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I138689650","host_organization_name":"University of Padua","host_organization_lineage":["https://openalex.org/I138689650"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/conferenceObject"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.4399999976158142,"id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":28,"referenced_works":["https://openalex.org/W13830013","https://openalex.org/W201760388","https://openalex.org/W570450981","https://openalex.org/W953912505","https://openalex.org/W1535333477","https://openalex.org/W1668075440","https://openalex.org/W1967940883","https://openalex.org/W1981336429","https://openalex.org/W1990313671","https://openalex.org/W2009720434","https://openalex.org/W2011340259","https://openalex.org/W2011912935","https://openalex.org/W2037775158","https://openalex.org/W2044433401","https://openalex.org/W2074613642","https://openalex.org/W2078542889","https://openalex.org/W2088891952","https://openalex.org/W2095319945","https://openalex.org/W2096283457","https://openalex.org/W2109883726","https://openalex.org/W2117692326","https://openalex.org/W2121906867","https://openalex.org/W2134508297","https://openalex.org/W2141545130","https://openalex.org/W2158485828","https://openalex.org/W2168303063","https://openalex.org/W2522051431","https://openalex.org/W2586469794"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2051487156","https://openalex.org/W2073681303","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109"],"abstract_inverted_index":null,"counts_by_year":[{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
