{"id":"https://openalex.org/W2490463412","doi":"https://doi.org/10.1007/978-3-319-38782-6_8","title":"Genome-Wide Structural Modeling of Protein-Protein Interactions","display_name":"Genome-Wide Structural Modeling of Protein-Protein Interactions","publication_year":2016,"publication_date":"2016-01-01","ids":{"openalex":"https://openalex.org/W2490463412","doi":"https://doi.org/10.1007/978-3-319-38782-6_8","mag":"2490463412"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-319-38782-6_8","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-38782-6_8","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5075173135","display_name":"Ivan Anishchenko","orcid":"https://orcid.org/0000-0003-3645-2044"},"institutions":[{"id":"https://openalex.org/I146416000","display_name":"University of Kansas","ror":"https://ror.org/001tmjg57","country_code":"US","type":"education","lineage":["https://openalex.org/I146416000"]},{"id":"https://openalex.org/I151823869","display_name":"National Academy of Sciences of Belarus","ror":"https://ror.org/02j8pe645","country_code":"BY","type":"government","lineage":["https://openalex.org/I151823869"]}],"countries":["BY","US"],"is_corresponding":false,"raw_author_name":"Ivan Anishchenko","raw_affiliation_strings":["Department of Molecular Biosciences, Center for Computational Biology, University of Kansas, Lawrence, KS, 66047, USA","United Institute of Informatics Problems, National Academy of Sciences, 220012, Minsk, Belarus"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular Biosciences, Center for Computational Biology, University of Kansas, Lawrence, KS, 66047, USA","institution_ids":["https://openalex.org/I146416000"]},{"raw_affiliation_string":"United Institute of Informatics Problems, National Academy of Sciences, 220012, Minsk, Belarus","institution_ids":["https://openalex.org/I151823869"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037324499","display_name":"Varsha D. Badal","orcid":"https://orcid.org/0000-0001-7281-9136"},"institutions":[{"id":"https://openalex.org/I146416000","display_name":"University of Kansas","ror":"https://ror.org/001tmjg57","country_code":"US","type":"education","lineage":["https://openalex.org/I146416000"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Varsha Badal","raw_affiliation_strings":["Department of Molecular Biosciences, Center for Computational Biology, University of Kansas, Lawrence, KS, 66047, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular Biosciences, Center for Computational Biology, University of Kansas, Lawrence, KS, 66047, USA","institution_ids":["https://openalex.org/I146416000"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033844469","display_name":"Taras Dauzhenka","orcid":"https://orcid.org/0000-0003-0771-7074"},"institutions":[{"id":"https://openalex.org/I146416000","display_name":"University of Kansas","ror":"https://ror.org/001tmjg57","country_code":"US","type":"education","lineage":["https://openalex.org/I146416000"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Taras Dauzhenka","raw_affiliation_strings":["Department of Molecular Biosciences, Center for Computational Biology, University of Kansas, Lawrence, KS, 66047, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular Biosciences, Center for Computational Biology, University of Kansas, Lawrence, KS, 66047, USA","institution_ids":["https://openalex.org/I146416000"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019986939","display_name":"Madhurima Das","orcid":"https://orcid.org/0000-0001-7515-3632"},"institutions":[{"id":"https://openalex.org/I146416000","display_name":"University of Kansas","ror":"https://ror.org/001tmjg57","country_code":"US","type":"education","lineage":["https://openalex.org/I146416000"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Madhurima Das","raw_affiliation_strings":["Department of Molecular Biosciences, Center for Computational Biology, University of Kansas, Lawrence, KS, 66047, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular Biosciences, Center for Computational Biology, University of Kansas, Lawrence, KS, 66047, USA","institution_ids":["https://openalex.org/I146416000"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004434095","display_name":"Alexander V. Tuzikov","orcid":"https://orcid.org/0000-0001-5970-4852"},"institutions":[{"id":"https://openalex.org/I151823869","display_name":"National Academy of Sciences of Belarus","ror":"https://ror.org/02j8pe645","country_code":"BY","type":"government","lineage":["https://openalex.org/I151823869"]}],"countries":["BY"],"is_corresponding":false,"raw_author_name":"Alexander V. Tuzikov","raw_affiliation_strings":["United Institute of Informatics Problems, National Academy of Sciences, 220012, Minsk, Belarus"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"United Institute of Informatics Problems, National Academy of Sciences, 220012, Minsk, Belarus","institution_ids":["https://openalex.org/I151823869"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050411996","display_name":"Petras J. Kundrotas","orcid":"https://orcid.org/0000-0001-5080-1664"},"institutions":[{"id":"https://openalex.org/I146416000","display_name":"University of Kansas","ror":"https://ror.org/001tmjg57","country_code":"US","type":"education","lineage":["https://openalex.org/I146416000"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Petras J. Kundrotas","raw_affiliation_strings":["Department of Molecular Biosciences, Center for Computational Biology, University of Kansas, Lawrence, KS, 66047, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular Biosciences, Center for Computational Biology, University of Kansas, Lawrence, KS, 66047, USA","institution_ids":["https://openalex.org/I146416000"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5013394507","display_name":"Ilya A. Vakser","orcid":"https://orcid.org/0000-0002-5743-2934"},"institutions":[{"id":"https://openalex.org/I146416000","display_name":"University of Kansas","ror":"https://ror.org/001tmjg57","country_code":"US","type":"education","lineage":["https://openalex.org/I146416000"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ilya A. Vakser","raw_affiliation_strings":["Department of Molecular Biosciences, Center for Computational Biology, University of Kansas, Lawrence, KS, 66047, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular Biosciences, Center for Computational Biology, University of Kansas, Lawrence, KS, 66047, USA","institution_ids":["https://openalex.org/I146416000"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.5385,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.64246983,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"95","last_page":"105"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7285388112068176},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6173337697982788},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5696607232093811},{"id":"https://openalex.org/keywords/benchmarking","display_name":"Benchmarking","score":0.5292363166809082},{"id":"https://openalex.org/keywords/docking","display_name":"Docking (animal)","score":0.5172175168991089},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.5132331848144531},{"id":"https://openalex.org/keywords/protein-structure-prediction","display_name":"Protein structure prediction","score":0.5087576508522034},{"id":"https://openalex.org/keywords/structural-genomics","display_name":"Structural genomics","score":0.4469616711139679},{"id":"https://openalex.org/keywords/protein\u2013protein-interaction","display_name":"Protein\u2013protein interaction","score":0.4159259796142578},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.21071761846542358},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.16335013508796692},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.13335376977920532}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7285388112068176},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6173337697982788},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5696607232093811},{"id":"https://openalex.org/C86251818","wikidata":"https://www.wikidata.org/wiki/Q816754","display_name":"Benchmarking","level":2,"score":0.5292363166809082},{"id":"https://openalex.org/C41685203","wikidata":"https://www.wikidata.org/wiki/Q1974042","display_name":"Docking (animal)","level":2,"score":0.5172175168991089},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.5132331848144531},{"id":"https://openalex.org/C18051474","wikidata":"https://www.wikidata.org/wiki/Q899656","display_name":"Protein structure prediction","level":3,"score":0.5087576508522034},{"id":"https://openalex.org/C192772702","wikidata":"https://www.wikidata.org/wiki/Q2583975","display_name":"Structural genomics","level":3,"score":0.4469616711139679},{"id":"https://openalex.org/C11804247","wikidata":"https://www.wikidata.org/wiki/Q896177","display_name":"Protein\u2013protein interaction","level":2,"score":0.4159259796142578},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.21071761846542358},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.16335013508796692},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.13335376977920532},{"id":"https://openalex.org/C162853370","wikidata":"https://www.wikidata.org/wiki/Q39809","display_name":"Marketing","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C144133560","wikidata":"https://www.wikidata.org/wiki/Q4830453","display_name":"Business","level":0,"score":0.0},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-319-38782-6_8","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-38782-6_8","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":22,"referenced_works":["https://openalex.org/W2000383223","https://openalex.org/W2000464453","https://openalex.org/W2021343666","https://openalex.org/W2039473152","https://openalex.org/W2040249893","https://openalex.org/W2043764521","https://openalex.org/W2055905702","https://openalex.org/W2102245393","https://openalex.org/W2121593618","https://openalex.org/W2124617249","https://openalex.org/W2130479394","https://openalex.org/W2136047244","https://openalex.org/W2139319441","https://openalex.org/W2144954642","https://openalex.org/W2148970764","https://openalex.org/W2155796229","https://openalex.org/W2159827975","https://openalex.org/W2163614321","https://openalex.org/W2165531467","https://openalex.org/W2171173309","https://openalex.org/W2193085234","https://openalex.org/W2915108429"],"related_works":["https://openalex.org/W2384478968","https://openalex.org/W1975122118","https://openalex.org/W2346580382","https://openalex.org/W2946599741","https://openalex.org/W2170471837","https://openalex.org/W2015390241","https://openalex.org/W2593264178","https://openalex.org/W3171039768","https://openalex.org/W2136856901","https://openalex.org/W2118652015"],"abstract_inverted_index":null,"counts_by_year":[{"year":2016,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
