{"id":"https://openalex.org/W2482491008","doi":"https://doi.org/10.1007/978-3-319-38782-6_2","title":"Poisson-Markov Mixture Model and Parallel Algorithm for Binning Massive and Heterogenous DNA Sequencing Reads","display_name":"Poisson-Markov Mixture Model and Parallel Algorithm for Binning Massive and Heterogenous DNA Sequencing Reads","publication_year":2016,"publication_date":"2016-01-01","ids":{"openalex":"https://openalex.org/W2482491008","doi":"https://doi.org/10.1007/978-3-319-38782-6_2","mag":"2482491008"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-319-38782-6_2","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-38782-6_2","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100364541","display_name":"Lu Wang","orcid":"https://orcid.org/0000-0003-4016-4096"},"institutions":[{"id":"https://openalex.org/I185443292","display_name":"Wayne State University","ror":"https://ror.org/01070mq45","country_code":"US","type":"education","lineage":["https://openalex.org/I185443292"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Lu Wang","raw_affiliation_strings":["Department of Computer Science, Wayne State University, Detroit, MI, 48202, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Wayne State University, Detroit, MI, 48202, USA","institution_ids":["https://openalex.org/I185443292"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009256505","display_name":"Dongxiao Zhu","orcid":"https://orcid.org/0000-0002-0225-7817"},"institutions":[{"id":"https://openalex.org/I185443292","display_name":"Wayne State University","ror":"https://ror.org/01070mq45","country_code":"US","type":"education","lineage":["https://openalex.org/I185443292"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dongxiao Zhu","raw_affiliation_strings":["Department of Computer Science, Wayne State University, Detroit, MI, 48202, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Wayne State University, Detroit, MI, 48202, USA","institution_ids":["https://openalex.org/I185443292"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100380305","display_name":"Yan Li","orcid":"https://orcid.org/0000-0002-1612-5719"},"institutions":[{"id":"https://openalex.org/I185443292","display_name":"Wayne State University","ror":"https://ror.org/01070mq45","country_code":"US","type":"education","lineage":["https://openalex.org/I185443292"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yan Li","raw_affiliation_strings":["Department of Computer Science, Wayne State University, Detroit, MI, 48202, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Wayne State University, Detroit, MI, 48202, USA","institution_ids":["https://openalex.org/I185443292"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5112047383","display_name":"Ming Dong","orcid":"https://orcid.org/0000-0003-4197-7267"},"institutions":[{"id":"https://openalex.org/I185443292","display_name":"Wayne State University","ror":"https://ror.org/01070mq45","country_code":"US","type":"education","lineage":["https://openalex.org/I185443292"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ming Dong","raw_affiliation_strings":["Department of Computer Science, Wayne State University, Detroit, MI, 48202, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Wayne State University, Detroit, MI, 48202, USA","institution_ids":["https://openalex.org/I185443292"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5100364541"],"corresponding_institution_ids":["https://openalex.org/I185443292"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.6773,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.66895929,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"15","last_page":"26"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9733999967575073,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.77750563621521},{"id":"https://openalex.org/keywords/metagenomics","display_name":"Metagenomics","score":0.7186443209648132},{"id":"https://openalex.org/keywords/k-mer","display_name":"k-mer","score":0.5370869040489197},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4939160943031311},{"id":"https://openalex.org/keywords/hidden-markov-model","display_name":"Hidden Markov model","score":0.4849953353404999},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.48313137888908386},{"id":"https://openalex.org/keywords/poisson-distribution","display_name":"Poisson distribution","score":0.464335560798645},{"id":"https://openalex.org/keywords/probabilistic-logic","display_name":"Probabilistic logic","score":0.4623405337333679},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.46069973707199097},{"id":"https://openalex.org/keywords/markov-chain","display_name":"Markov chain","score":0.44963571429252625},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4307171404361725},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.28826749324798584},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.25435447692871094},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.17925116419792175},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.11412644386291504},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.10307842493057251}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.77750563621521},{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.7186443209648132},{"id":"https://openalex.org/C2279292","wikidata":"https://www.wikidata.org/wiki/Q6322851","display_name":"k-mer","level":4,"score":0.5370869040489197},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4939160943031311},{"id":"https://openalex.org/C23224414","wikidata":"https://www.wikidata.org/wiki/Q176769","display_name":"Hidden Markov model","level":2,"score":0.4849953353404999},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.48313137888908386},{"id":"https://openalex.org/C100906024","wikidata":"https://www.wikidata.org/wiki/Q205692","display_name":"Poisson distribution","level":2,"score":0.464335560798645},{"id":"https://openalex.org/C49937458","wikidata":"https://www.wikidata.org/wiki/Q2599292","display_name":"Probabilistic logic","level":2,"score":0.4623405337333679},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.46069973707199097},{"id":"https://openalex.org/C98763669","wikidata":"https://www.wikidata.org/wiki/Q176645","display_name":"Markov chain","level":2,"score":0.44963571429252625},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4307171404361725},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.28826749324798584},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.25435447692871094},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.17925116419792175},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.11412644386291504},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.10307842493057251},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-319-38782-6_2","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-38782-6_2","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":22,"referenced_works":["https://openalex.org/W36039830","https://openalex.org/W1555933177","https://openalex.org/W1974379434","https://openalex.org/W1997673861","https://openalex.org/W2032870665","https://openalex.org/W2037444377","https://openalex.org/W2048818637","https://openalex.org/W2048899282","https://openalex.org/W2064261261","https://openalex.org/W2082203850","https://openalex.org/W2096128575","https://openalex.org/W2103088074","https://openalex.org/W2115546424","https://openalex.org/W2140211206","https://openalex.org/W2143842034","https://openalex.org/W2150208009","https://openalex.org/W2150484441","https://openalex.org/W2153138305","https://openalex.org/W2153990926","https://openalex.org/W2162039942","https://openalex.org/W2163584430","https://openalex.org/W4235169531"],"related_works":["https://openalex.org/W4401372636","https://openalex.org/W1969665739","https://openalex.org/W2339602899","https://openalex.org/W2949565680","https://openalex.org/W4298353702","https://openalex.org/W2902099752","https://openalex.org/W2964143144","https://openalex.org/W1997673861","https://openalex.org/W2057215967","https://openalex.org/W4232608576"],"abstract_inverted_index":null,"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
