{"id":"https://openalex.org/W2478505754","doi":"https://doi.org/10.1007/978-3-319-31744-1_41","title":"De Novo Assembly and Cluster Analysis of Siberian Larch Transcriptome and Genome","display_name":"De Novo Assembly and Cluster Analysis of Siberian Larch Transcriptome and Genome","publication_year":2016,"publication_date":"2016-01-01","ids":{"openalex":"https://openalex.org/W2478505754","doi":"https://doi.org/10.1007/978-3-319-31744-1_41","mag":"2478505754"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-319-31744-1_41","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-31744-1_41","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5039764037","display_name":"Michael G. Sadovsky","orcid":"https://orcid.org/0000-0002-1807-0715"},"institutions":[{"id":"https://openalex.org/I4210136724","display_name":"Institute of Computational Modeling","ror":"https://ror.org/047f8bv22","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210136724"]}],"countries":["RU"],"is_corresponding":true,"raw_author_name":"Michael Sadovsky","raw_affiliation_strings":["Institute of Computational Modelling of SB RAS, Akademgorodok, 660036, Krasnoyarsk, Russia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Computational Modelling of SB RAS, Akademgorodok, 660036, Krasnoyarsk, Russia","institution_ids":["https://openalex.org/I4210136724"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085239561","display_name":"Yuliya A. Putintseva","orcid":"https://orcid.org/0000-0002-1619-6429"},"institutions":[{"id":"https://openalex.org/I4210136724","display_name":"Institute of Computational Modeling","ror":"https://ror.org/047f8bv22","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210136724"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Yulia Putintseva","raw_affiliation_strings":["Institute of Computational Modelling of SB RAS, Akademgorodok, 660036, Krasnoyarsk, Russia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Computational Modelling of SB RAS, Akademgorodok, 660036, Krasnoyarsk, Russia","institution_ids":["https://openalex.org/I4210136724"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007933328","display_name":"Vladislav V. Birukov","orcid":null},"institutions":[{"id":"https://openalex.org/I4210136724","display_name":"Institute of Computational Modeling","ror":"https://ror.org/047f8bv22","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210136724"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Vladislav Birukov","raw_affiliation_strings":["Institute of Computational Modelling of SB RAS, Akademgorodok, 660036, Krasnoyarsk, Russia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Computational Modelling of SB RAS, Akademgorodok, 660036, Krasnoyarsk, Russia","institution_ids":["https://openalex.org/I4210136724"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009500734","display_name":"Serafima Novikova","orcid":null},"institutions":[{"id":"https://openalex.org/I4210136724","display_name":"Institute of Computational Modeling","ror":"https://ror.org/047f8bv22","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210136724"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Serafima Novikova","raw_affiliation_strings":["Institute of Computational Modelling of SB RAS, Akademgorodok, 660036, Krasnoyarsk, Russia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Computational Modelling of SB RAS, Akademgorodok, 660036, Krasnoyarsk, Russia","institution_ids":["https://openalex.org/I4210136724"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5004276854","display_name":"Konstantin V. Krutovsky","orcid":"https://orcid.org/0000-0002-8819-7084"},"institutions":[{"id":"https://openalex.org/I4210136724","display_name":"Institute of Computational Modeling","ror":"https://ror.org/047f8bv22","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210136724"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Konstantin Krutovsky","raw_affiliation_strings":["Institute of Computational Modelling of SB RAS, Akademgorodok, 660036, Krasnoyarsk, Russia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Computational Modelling of SB RAS, Akademgorodok, 660036, Krasnoyarsk, Russia","institution_ids":["https://openalex.org/I4210136724"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5039764037"],"corresponding_institution_ids":["https://openalex.org/I4210136724"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":4.2556,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.95277707,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"455","last_page":"464"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.984000027179718,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.984000027179718,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.9677000045776367,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13506","display_name":"Botanical Research and Chemistry","score":0.9642999768257141,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/larch","display_name":"Larch","score":0.8915435075759888},{"id":"https://openalex.org/keywords/contig","display_name":"Contig","score":0.7698999643325806},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.7492852210998535},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.6568998694419861},{"id":"https://openalex.org/keywords/sequence-assembly","display_name":"Sequence assembly","score":0.5763146877288818},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5297162532806396},{"id":"https://openalex.org/keywords/cluster","display_name":"Cluster (spacecraft)","score":0.4858381450176239},{"id":"https://openalex.org/keywords/de-novo-transcriptome-assembly","display_name":"De novo transcriptome assembly","score":0.4255266785621643},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4074278175830841},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3539257049560547},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.26494765281677246},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.15624600648880005},{"id":"https://openalex.org/keywords/botany","display_name":"Botany","score":0.15459436178207397},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.05872690677642822}],"concepts":[{"id":"https://openalex.org/C2778551664","wikidata":"https://www.wikidata.org/wiki/Q25618","display_name":"Larch","level":2,"score":0.8915435075759888},{"id":"https://openalex.org/C59582021","wikidata":"https://www.wikidata.org/wiki/Q1128751","display_name":"Contig","level":4,"score":0.7698999643325806},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.7492852210998535},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6568998694419861},{"id":"https://openalex.org/C18949551","wikidata":"https://www.wikidata.org/wiki/Q740578","display_name":"Sequence assembly","level":5,"score":0.5763146877288818},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5297162532806396},{"id":"https://openalex.org/C164866538","wikidata":"https://www.wikidata.org/wiki/Q367351","display_name":"Cluster (spacecraft)","level":2,"score":0.4858381450176239},{"id":"https://openalex.org/C50489715","wikidata":"https://www.wikidata.org/wiki/Q5244960","display_name":"De novo transcriptome assembly","level":5,"score":0.4255266785621643},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4074278175830841},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3539257049560547},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.26494765281677246},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.15624600648880005},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.15459436178207397},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.05872690677642822},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1007/978-3-319-31744-1_41","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-31744-1_41","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:elib.sfu-kras.ru:2311/32956","is_oa":false,"landing_page_url":"http://elib.sfu-kras.ru/handle/2311/32956","pdf_url":null,"source":{"id":"https://openalex.org/S4306400727","display_name":"SibFU Digital Repository (Siberian Federal University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4853710","host_organization_name":"Siberian Federal University","host_organization_lineage":["https://openalex.org/I4853710"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"},{"id":"pmh:oai:publications.goettingen-research-online.de:2/125283","is_oa":false,"landing_page_url":"https://resolver.sub.uni-goettingen.de/purl?gro-2/125283","pdf_url":null,"source":{"id":"https://openalex.org/S4306401634","display_name":"GoeScholar  The Publication Server of the Georg-August-Universit\u00e4t G\u00f6ttingen (Georg-August-Universit\u00e4t G\u00f6ttingen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210122495","host_organization_name":"Asklepios Klinik St. Georg","host_organization_lineage":["https://openalex.org/I4210122495"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/conferenceObject"},{"id":"pmh:oai:publications.goettingen-research-online.de:2/158201","is_oa":false,"landing_page_url":"https://resolver.sub.uni-goettingen.de/purl?gro-2/158201","pdf_url":null,"source":{"id":"https://openalex.org/S4306401634","display_name":"GoeScholar  The Publication Server of the Georg-August-Universit\u00e4t G\u00f6ttingen (Georg-August-Universit\u00e4t G\u00f6ttingen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210122495","host_organization_name":"Asklepios Klinik St. Georg","host_organization_lineage":["https://openalex.org/I4210122495"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/conferenceObject"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.7400000095367432,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":17,"referenced_works":["https://openalex.org/W154642095","https://openalex.org/W192093438","https://openalex.org/W568124517","https://openalex.org/W1612304093","https://openalex.org/W1930470890","https://openalex.org/W2013775020","https://openalex.org/W2074231493","https://openalex.org/W2103065948","https://openalex.org/W2112524621","https://openalex.org/W2124521566","https://openalex.org/W2135346934","https://openalex.org/W2188128213","https://openalex.org/W2412727441","https://openalex.org/W2413192255","https://openalex.org/W2952048901","https://openalex.org/W3100210986","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2089480001","https://openalex.org/W2885619582","https://openalex.org/W3167837387","https://openalex.org/W54719527","https://openalex.org/W4250462852","https://openalex.org/W1021674602","https://openalex.org/W2049364822","https://openalex.org/W2198542973","https://openalex.org/W2331687108","https://openalex.org/W3216228911"],"abstract_inverted_index":null,"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":3},{"year":2017,"cited_by_count":2}],"updated_date":"2026-08-04T08:18:43.703281","created_date":"2025-10-10T00:00:00"}