{"id":"https://openalex.org/W2469333531","doi":"https://doi.org/10.1007/978-3-319-31676-5_24","title":"Efficiently Finding Paths Between Classes to Build a SPARQL Query for Life-Science Databases","display_name":"Efficiently Finding Paths Between Classes to Build a SPARQL Query for Life-Science Databases","publication_year":2016,"publication_date":"2016-01-01","ids":{"openalex":"https://openalex.org/W2469333531","doi":"https://doi.org/10.1007/978-3-319-31676-5_24","mag":"2469333531"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-319-31676-5_24","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-31676-5_24","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5001958215","display_name":"Atsuko Yamaguchi","orcid":"https://orcid.org/0000-0001-7538-5337"},"institutions":[{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Atsuko Yamaguchi","raw_affiliation_strings":["Database Center for Life Science (DBCLS), Research Organization of Information and Systems, 178-4-4 Wakashiba, Kashiwa, Chiba, 277-0871, Japan"],"affiliations":[{"raw_affiliation_string":"Database Center for Life Science (DBCLS), Research Organization of Information and Systems, 178-4-4 Wakashiba, Kashiwa, Chiba, 277-0871, Japan","institution_ids":["https://openalex.org/I4210158934"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051448264","display_name":"Kouji Kozaki","orcid":"https://orcid.org/0000-0003-4578-4980"},"institutions":[{"id":"https://openalex.org/I98285908","display_name":"Osaka University","ror":"https://ror.org/035t8zc32","country_code":"JP","type":"education","lineage":["https://openalex.org/I98285908"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kouji Kozaki","raw_affiliation_strings":["Osaka University, Ibaraki, Japan","The Institute of Scientific and Industrial Research (ISIR), Osaka University, 8-1 Mihogaoka, Osaka, Ibaraki, 567-0047, Japan"],"affiliations":[{"raw_affiliation_string":"Osaka University, Ibaraki, Japan","institution_ids":["https://openalex.org/I98285908"]},{"raw_affiliation_string":"The Institute of Scientific and Industrial Research (ISIR), Osaka University, 8-1 Mihogaoka, Osaka, Ibaraki, 567-0047, Japan","institution_ids":["https://openalex.org/I98285908"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009151185","display_name":"Kai Lenz","orcid":null},"institutions":[{"id":"https://openalex.org/I4210165842","display_name":"RIKEN Center for Advanced Photonics","ror":"https://ror.org/05vmjks78","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210110652","https://openalex.org/I4210165842"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kai Lenz","raw_affiliation_strings":["Advanced Center for Computing and Communication (ACCC), RIKEN, 2-1 Hirosawa, Wako, Saitama, 51-0198, Japan"],"affiliations":[{"raw_affiliation_string":"Advanced Center for Computing and Communication (ACCC), RIKEN, 2-1 Hirosawa, Wako, Saitama, 51-0198, Japan","institution_ids":["https://openalex.org/I4210165842"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076695031","display_name":"Hongyan Wu","orcid":"https://orcid.org/0000-0002-6887-2548"},"institutions":[{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Hongyan Wu","raw_affiliation_strings":["Database Center for Life Science (DBCLS), Research Organization of Information and Systems, 178-4-4 Wakashiba, Kashiwa, Chiba, 277-0871, Japan"],"affiliations":[{"raw_affiliation_string":"Database Center for Life Science (DBCLS), Research Organization of Information and Systems, 178-4-4 Wakashiba, Kashiwa, Chiba, 277-0871, Japan","institution_ids":["https://openalex.org/I4210158934"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063942302","display_name":"Yasunori Yamamoto","orcid":"https://orcid.org/0000-0002-6943-6887"},"institutions":[{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yasunori Yamamoto","raw_affiliation_strings":["Database Center for Life Science (DBCLS), Research Organization of Information and Systems, 178-4-4 Wakashiba, Kashiwa, Chiba, 277-0871, Japan"],"affiliations":[{"raw_affiliation_string":"Database Center for Life Science (DBCLS), Research Organization of Information and Systems, 178-4-4 Wakashiba, Kashiwa, Chiba, 277-0871, Japan","institution_ids":["https://openalex.org/I4210158934"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5056616525","display_name":"Norio Kobayashi","orcid":"https://orcid.org/0009-0007-8718-6010"},"institutions":[{"id":"https://openalex.org/I4210165842","display_name":"RIKEN Center for Advanced Photonics","ror":"https://ror.org/05vmjks78","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210110652","https://openalex.org/I4210165842"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Norio Kobayashi","raw_affiliation_strings":["Advanced Center for Computing and Communication (ACCC), RIKEN, 2-1 Hirosawa, Wako, Saitama, 51-0198, Japan"],"affiliations":[{"raw_affiliation_string":"Advanced Center for Computing and Communication (ACCC), RIKEN, 2-1 Hirosawa, Wako, Saitama, 51-0198, Japan","institution_ids":["https://openalex.org/I4210165842"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5001958215"],"corresponding_institution_ids":["https://openalex.org/I4210158934"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":2.0318,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.87133528,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"321","last_page":"330"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9836000204086304,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sparql","display_name":"SPARQL","score":0.9945462346076965},{"id":"https://openalex.org/keywords/named-graph","display_name":"Named graph","score":0.9017570614814758},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.875853419303894},{"id":"https://openalex.org/keywords/rdf","display_name":"RDF","score":0.8717931509017944},{"id":"https://openalex.org/keywords/rdf-schema","display_name":"RDF Schema","score":0.595431923866272},{"id":"https://openalex.org/keywords/rdf-query-language","display_name":"RDF query language","score":0.580283522605896},{"id":"https://openalex.org/keywords/linked-data","display_name":"Linked data","score":0.5475302338600159},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5236893892288208},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.451946496963501},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.4466903507709503},{"id":"https://openalex.org/keywords/class","display_name":"Class (philosophy)","score":0.44594326615333557},{"id":"https://openalex.org/keywords/rdf/xml","display_name":"RDF/XML","score":0.4435531198978424},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.4020630717277527},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.2755405306816101},{"id":"https://openalex.org/keywords/web-search-query","display_name":"Web search query","score":0.1641424000263214},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.12286710739135742},{"id":"https://openalex.org/keywords/search-engine","display_name":"Search engine","score":0.11263838410377502},{"id":"https://openalex.org/keywords/web-query-classification","display_name":"Web query classification","score":0.09417152404785156}],"concepts":[{"id":"https://openalex.org/C41009113","wikidata":"https://www.wikidata.org/wiki/Q54871","display_name":"SPARQL","level":4,"score":0.9945462346076965},{"id":"https://openalex.org/C110893760","wikidata":"https://www.wikidata.org/wiki/Q3115590","display_name":"Named graph","level":5,"score":0.9017570614814758},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.875853419303894},{"id":"https://openalex.org/C147497476","wikidata":"https://www.wikidata.org/wiki/Q54872","display_name":"RDF","level":3,"score":0.8717931509017944},{"id":"https://openalex.org/C15657843","wikidata":"https://www.wikidata.org/wiki/Q1751819","display_name":"RDF Schema","level":5,"score":0.595431923866272},{"id":"https://openalex.org/C96956885","wikidata":"https://www.wikidata.org/wiki/Q6138701","display_name":"RDF query language","level":5,"score":0.580283522605896},{"id":"https://openalex.org/C69075417","wikidata":"https://www.wikidata.org/wiki/Q515701","display_name":"Linked data","level":3,"score":0.5475302338600159},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5236893892288208},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.451946496963501},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.4466903507709503},{"id":"https://openalex.org/C2777212361","wikidata":"https://www.wikidata.org/wiki/Q5127848","display_name":"Class (philosophy)","level":2,"score":0.44594326615333557},{"id":"https://openalex.org/C78923513","wikidata":"https://www.wikidata.org/wiki/Q2115","display_name":"RDF/XML","level":5,"score":0.4435531198978424},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.4020630717277527},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.2755405306816101},{"id":"https://openalex.org/C164120249","wikidata":"https://www.wikidata.org/wiki/Q995982","display_name":"Web search query","level":3,"score":0.1641424000263214},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.12286710739135742},{"id":"https://openalex.org/C97854310","wikidata":"https://www.wikidata.org/wiki/Q19541","display_name":"Search engine","level":2,"score":0.11263838410377502},{"id":"https://openalex.org/C118689300","wikidata":"https://www.wikidata.org/wiki/Q7978614","display_name":"Web query classification","level":4,"score":0.09417152404785156}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-319-31676-5_24","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-31676-5_24","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320338078","display_name":"National Bioscience Database Center","ror":"https://ror.org/00097mb19"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":16,"referenced_works":["https://openalex.org/W67174364","https://openalex.org/W653088692","https://openalex.org/W1561154769","https://openalex.org/W1596900720","https://openalex.org/W2019876129","https://openalex.org/W2039616196","https://openalex.org/W2062061945","https://openalex.org/W2095163950","https://openalex.org/W2113310608","https://openalex.org/W2120236199","https://openalex.org/W2138807684","https://openalex.org/W2165428180","https://openalex.org/W2296071544","https://openalex.org/W4233334497","https://openalex.org/W4298157404","https://openalex.org/W4300974897"],"related_works":["https://openalex.org/W2416869599","https://openalex.org/W2363838908","https://openalex.org/W2092512344","https://openalex.org/W2091301598","https://openalex.org/W3150241097","https://openalex.org/W2612001157","https://openalex.org/W3083425935","https://openalex.org/W2079781157","https://openalex.org/W1534084317","https://openalex.org/W930874392"],"abstract_inverted_index":null,"counts_by_year":[{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":4}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
