{"id":"https://openalex.org/W2397505103","doi":"https://doi.org/10.1007/978-3-319-23862-3_52","title":"CRF-TM: A Conditional Random Field Method for Predicting Transmembrane Topology","display_name":"CRF-TM: A Conditional Random Field Method for Predicting Transmembrane Topology","publication_year":2015,"publication_date":"2015-01-01","ids":{"openalex":"https://openalex.org/W2397505103","doi":"https://doi.org/10.1007/978-3-319-23862-3_52","mag":"2397505103"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-319-23862-3_52","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-23862-3_52","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5076013894","display_name":"Weizhong Lu","orcid":"https://orcid.org/0000-0002-3390-2049"},"institutions":[{"id":"https://openalex.org/I308837","display_name":"Suzhou University of Science and Technology","ror":"https://ror.org/04en8wb91","country_code":"CN","type":"education","lineage":["https://openalex.org/I308837"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Weizhong Lu","raw_affiliation_strings":["School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, 215009, China"],"affiliations":[{"raw_affiliation_string":"School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, 215009, China","institution_ids":["https://openalex.org/I308837"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058347472","display_name":"Baochuan Fu","orcid":"https://orcid.org/0000-0002-3131-1907"},"institutions":[{"id":"https://openalex.org/I308837","display_name":"Suzhou University of Science and Technology","ror":"https://ror.org/04en8wb91","country_code":"CN","type":"education","lineage":["https://openalex.org/I308837"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Baochuan Fu","raw_affiliation_strings":["School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, 215009, China","Suzhou University of Science and Technology, Suzhou, China"],"affiliations":[{"raw_affiliation_string":"School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, 215009, China","institution_ids":["https://openalex.org/I308837"]},{"raw_affiliation_string":"Suzhou University of Science and Technology, Suzhou, China","institution_ids":["https://openalex.org/I308837"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076525932","display_name":"Hongjie Wu","orcid":"https://orcid.org/0000-0001-5921-8707"},"institutions":[{"id":"https://openalex.org/I308837","display_name":"Suzhou University of Science and Technology","ror":"https://ror.org/04en8wb91","country_code":"CN","type":"education","lineage":["https://openalex.org/I308837"]},{"id":"https://openalex.org/I4210141563","display_name":"Institute of Information Technologies","ror":"https://ror.org/03ypsgm65","country_code":"BG","type":"facility","lineage":["https://openalex.org/I24768866","https://openalex.org/I4210141563"]}],"countries":["BG","CN"],"is_corresponding":false,"raw_author_name":"Hongjie Wu","raw_affiliation_strings":["Jiangsu Provincial Key Lab for Information Processing Technologies, Suzhou, 215006, China","School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, 215009, China"],"affiliations":[{"raw_affiliation_string":"Jiangsu Provincial Key Lab for Information Processing Technologies, Suzhou, 215006, China","institution_ids":["https://openalex.org/I4210141563"]},{"raw_affiliation_string":"School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, 215009, China","institution_ids":["https://openalex.org/I308837"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111935848","display_name":"Qiang L\u00fc","orcid":null},"institutions":[{"id":"https://openalex.org/I4210141563","display_name":"Institute of Information Technologies","ror":"https://ror.org/03ypsgm65","country_code":"BG","type":"facility","lineage":["https://openalex.org/I24768866","https://openalex.org/I4210141563"]},{"id":"https://openalex.org/I3923682","display_name":"Soochow University","ror":"https://ror.org/05t8y2r12","country_code":"CN","type":"education","lineage":["https://openalex.org/I3923682"]}],"countries":["BG","CN"],"is_corresponding":false,"raw_author_name":"Qiang L\u00fc","raw_affiliation_strings":["Jiangsu Provincial Key Lab for Information Processing Technologies, Suzhou, 215006, China","School of Computer Science and Technology, Soochow University, Suzhou, 215006, China"],"affiliations":[{"raw_affiliation_string":"Jiangsu Provincial Key Lab for Information Processing Technologies, Suzhou, 215006, China","institution_ids":["https://openalex.org/I4210141563"]},{"raw_affiliation_string":"School of Computer Science and Technology, Soochow University, Suzhou, 215006, China","institution_ids":["https://openalex.org/I3923682"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020787458","display_name":"Kun Wang","orcid":"https://orcid.org/0000-0001-8923-8557"},"institutions":[{"id":"https://openalex.org/I308837","display_name":"Suzhou University of Science and Technology","ror":"https://ror.org/04en8wb91","country_code":"CN","type":"education","lineage":["https://openalex.org/I308837"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Kun Wang","raw_affiliation_strings":["School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, 215009, China"],"affiliations":[{"raw_affiliation_string":"School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, 215009, China","institution_ids":["https://openalex.org/I308837"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101966608","display_name":"Min Jiang","orcid":"https://orcid.org/0000-0003-1905-2284"},"institutions":[{"id":"https://openalex.org/I4210153519","display_name":"First Affiliated Hospital of Soochow University","ror":"https://ror.org/051jg5p78","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210153519"]},{"id":"https://openalex.org/I3923682","display_name":"Soochow University","ror":"https://ror.org/05t8y2r12","country_code":"CN","type":"education","lineage":["https://openalex.org/I3923682"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Min Jiang","raw_affiliation_strings":["The First Affiliated Hospital of Soochow University, Suzhou, 215006, China"],"affiliations":[{"raw_affiliation_string":"The First Affiliated Hospital of Soochow University, Suzhou, 215006, China","institution_ids":["https://openalex.org/I3923682","https://openalex.org/I4210153519"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5076013894"],"corresponding_institution_ids":["https://openalex.org/I308837"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.6184,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.7192839,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"529","last_page":"537"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11178","display_name":"Receptor Mechanisms and Signaling","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.994700014591217,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/conditional-random-field","display_name":"Conditional random field","score":0.8856983184814453},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6003649830818176},{"id":"https://openalex.org/keywords/transmembrane-protein","display_name":"Transmembrane protein","score":0.5962145924568176},{"id":"https://openalex.org/keywords/transmembrane-domain","display_name":"Transmembrane domain","score":0.49107813835144043},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4790041148662567},{"id":"https://openalex.org/keywords/rank","display_name":"Rank (graph theory)","score":0.4706026017665863},{"id":"https://openalex.org/keywords/membrane-topology","display_name":"Membrane topology","score":0.4367740750312805},{"id":"https://openalex.org/keywords/topology","display_name":"Topology (electrical circuits)","score":0.4254959225654602},{"id":"https://openalex.org/keywords/helix","display_name":"Helix (gastropod)","score":0.42402786016464233},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4096379578113556},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3850523829460144},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3610483407974243},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.29860103130340576},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.27464139461517334},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.2346576452255249},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.15949857234954834},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.09629836678504944},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.07663771510124207}],"concepts":[{"id":"https://openalex.org/C152565575","wikidata":"https://www.wikidata.org/wiki/Q1124538","display_name":"Conditional random field","level":2,"score":0.8856983184814453},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6003649830818176},{"id":"https://openalex.org/C24530287","wikidata":"https://www.wikidata.org/wiki/Q424204","display_name":"Transmembrane protein","level":3,"score":0.5962145924568176},{"id":"https://openalex.org/C118892022","wikidata":"https://www.wikidata.org/wiki/Q7834587","display_name":"Transmembrane domain","level":3,"score":0.49107813835144043},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4790041148662567},{"id":"https://openalex.org/C164226766","wikidata":"https://www.wikidata.org/wiki/Q7293202","display_name":"Rank (graph theory)","level":2,"score":0.4706026017665863},{"id":"https://openalex.org/C534586","wikidata":"https://www.wikidata.org/wiki/Q6815143","display_name":"Membrane topology","level":4,"score":0.4367740750312805},{"id":"https://openalex.org/C184720557","wikidata":"https://www.wikidata.org/wiki/Q7825049","display_name":"Topology (electrical circuits)","level":2,"score":0.4254959225654602},{"id":"https://openalex.org/C2778530040","wikidata":"https://www.wikidata.org/wiki/Q1937315","display_name":"Helix (gastropod)","level":3,"score":0.42402786016464233},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4096379578113556},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3850523829460144},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3610483407974243},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.29860103130340576},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.27464139461517334},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.2346576452255249},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.15949857234954834},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09629836678504944},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.07663771510124207},{"id":"https://openalex.org/C170493617","wikidata":"https://www.wikidata.org/wiki/Q208467","display_name":"Receptor","level":2,"score":0.0},{"id":"https://openalex.org/C2779965526","wikidata":"https://www.wikidata.org/wiki/Q308841","display_name":"Snail","level":2,"score":0.0},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-319-23862-3_52","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-23862-3_52","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.6700000166893005}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":22,"referenced_works":["https://openalex.org/W1971147414","https://openalex.org/W1984674282","https://openalex.org/W2006719424","https://openalex.org/W2009134948","https://openalex.org/W2019220458","https://openalex.org/W2051545676","https://openalex.org/W2085008263","https://openalex.org/W2105537627","https://openalex.org/W2106023295","https://openalex.org/W2110425545","https://openalex.org/W2112905569","https://openalex.org/W2114083522","https://openalex.org/W2146396614","https://openalex.org/W2147880316","https://openalex.org/W2151156268","https://openalex.org/W2153180326","https://openalex.org/W2158906453","https://openalex.org/W2166814967","https://openalex.org/W2171228830","https://openalex.org/W2327230023","https://openalex.org/W2346205768","https://openalex.org/W2387612212"],"related_works":["https://openalex.org/W1986078734","https://openalex.org/W2100968031","https://openalex.org/W3141676181","https://openalex.org/W2004206014","https://openalex.org/W2162996075","https://openalex.org/W2018511618","https://openalex.org/W1969680461","https://openalex.org/W2053040211","https://openalex.org/W1998492040","https://openalex.org/W2142427768"],"abstract_inverted_index":null,"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2015,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
