{"id":"https://openalex.org/W2406009210","doi":"https://doi.org/10.1007/978-3-319-19941-2_42","title":"PDP-RF: Protein Domain Boundary Prediction Using Random Forest Classifier","display_name":"PDP-RF: Protein Domain Boundary Prediction Using Random Forest Classifier","publication_year":2015,"publication_date":"2015-01-01","ids":{"openalex":"https://openalex.org/W2406009210","doi":"https://doi.org/10.1007/978-3-319-19941-2_42","mag":"2406009210"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-319-19941-2_42","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-19941-2_42","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5018474833","display_name":"Piyali Chatterjee","orcid":"https://orcid.org/0000-0002-7655-0485"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Piyali Chatterjee","raw_affiliation_strings":["Department of Computer Science and Engineering, Netaji Subhash Engineering College, Garia, Kolkata, 700152, India"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Netaji Subhash Engineering College, Garia, Kolkata, 700152, India","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043105133","display_name":"Subhadip Basu","orcid":"https://orcid.org/0000-0003-1780-0461"},"institutions":[{"id":"https://openalex.org/I170979836","display_name":"Jadavpur University","ror":"https://ror.org/02af4h012","country_code":"IN","type":"education","lineage":["https://openalex.org/I170979836"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Subhadip Basu","raw_affiliation_strings":["Department of Computer Science and Engineering, Jadavpur University, Kolkata, 700032, India"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Jadavpur University, Kolkata, 700032, India","institution_ids":["https://openalex.org/I170979836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014140856","display_name":"Julian Zubek","orcid":"https://orcid.org/0000-0003-4842-5609"},"institutions":[{"id":"https://openalex.org/I99542240","display_name":"Polish Academy of Sciences","ror":"https://ror.org/01dr6c206","country_code":"PL","type":"funder","lineage":["https://openalex.org/I99542240"]},{"id":"https://openalex.org/I4210087266","display_name":"Institute of Computer Science","ror":"https://ror.org/003fvp964","country_code":"PL","type":"facility","lineage":["https://openalex.org/I4210087266","https://openalex.org/I99542240"]},{"id":"https://openalex.org/I4654613","display_name":"University of Warsaw","ror":"https://ror.org/039bjqg32","country_code":"PL","type":"education","lineage":["https://openalex.org/I4654613"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Julian Zubek","raw_affiliation_strings":["Centre of New Technologies, University of Warsaw, Warsaw, Poland","Institute of Computer Science, Polish Academy of Sciences, Warsaw, Poland"],"affiliations":[{"raw_affiliation_string":"Centre of New Technologies, University of Warsaw, Warsaw, Poland","institution_ids":["https://openalex.org/I4654613"]},{"raw_affiliation_string":"Institute of Computer Science, Polish Academy of Sciences, Warsaw, Poland","institution_ids":["https://openalex.org/I99542240","https://openalex.org/I4210087266"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101521556","display_name":"Mahantapas Kundu","orcid":"https://orcid.org/0000-0001-7662-6817"},"institutions":[{"id":"https://openalex.org/I170979836","display_name":"Jadavpur University","ror":"https://ror.org/02af4h012","country_code":"IN","type":"education","lineage":["https://openalex.org/I170979836"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Mahantapas Kundu","raw_affiliation_strings":["Department of Computer Science and Engineering, Jadavpur University, Kolkata, 700032, India"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Jadavpur University, Kolkata, 700032, India","institution_ids":["https://openalex.org/I170979836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000210772","display_name":"Mita Nasipuri","orcid":"https://orcid.org/0000-0002-3906-5309"},"institutions":[{"id":"https://openalex.org/I170979836","display_name":"Jadavpur University","ror":"https://ror.org/02af4h012","country_code":"IN","type":"education","lineage":["https://openalex.org/I170979836"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Mita Nasipuri","raw_affiliation_strings":["Department of Computer Science and Engineering, Jadavpur University, Kolkata, 700032, India"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Jadavpur University, Kolkata, 700032, India","institution_ids":["https://openalex.org/I170979836"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5021916927","display_name":"Dariusz Plewczy\u0144ski","orcid":"https://orcid.org/0000-0002-3840-7610"},"institutions":[{"id":"https://openalex.org/I75929689","display_name":"UConn Health","ror":"https://ror.org/02kzs4y22","country_code":"US","type":"funder","lineage":["https://openalex.org/I75929689"]},{"id":"https://openalex.org/I146122375","display_name":"Medical University of Bia\u0142ystok","ror":"https://ror.org/00y4ya841","country_code":"PL","type":"education","lineage":["https://openalex.org/I146122375"]},{"id":"https://openalex.org/I4654613","display_name":"University of Warsaw","ror":"https://ror.org/039bjqg32","country_code":"PL","type":"education","lineage":["https://openalex.org/I4654613"]}],"countries":["PL","US"],"is_corresponding":false,"raw_author_name":"Dariusz Plewczynski","raw_affiliation_strings":["Centre for Innovative Research, Medical University of Bialystok, Bialystok, Poland","Centre of New Technologies, University of Warsaw, Warsaw, Poland","The Jackson Laboratory for Genomic Medicine, c/o University of Connecticut Health Center, 263 Farmington Avenue, Farmington, CT, 06030, USA"],"affiliations":[{"raw_affiliation_string":"Centre for Innovative Research, Medical University of Bialystok, Bialystok, Poland","institution_ids":["https://openalex.org/I146122375"]},{"raw_affiliation_string":"Centre of New Technologies, University of Warsaw, Warsaw, Poland","institution_ids":["https://openalex.org/I4654613"]},{"raw_affiliation_string":"The Jackson Laboratory for Genomic Medicine, c/o University of Connecticut Health Center, 263 Farmington Avenue, Farmington, CT, 06030, USA","institution_ids":["https://openalex.org/I75929689"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5043105133"],"corresponding_institution_ids":["https://openalex.org/I170979836"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":1.2368,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.81353715,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"441","last_page":"450"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/casp","display_name":"CASP","score":0.988527774810791},{"id":"https://openalex.org/keywords/random-forest","display_name":"Random forest","score":0.8872811198234558},{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.7345751523971558},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.715851902961731},{"id":"https://openalex.org/keywords/protein-structure-prediction","display_name":"Protein structure prediction","score":0.6131953597068787},{"id":"https://openalex.org/keywords/structural-genomics","display_name":"Structural genomics","score":0.5314024686813354},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.524569034576416},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3906208872795105},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.38946014642715454},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.38716569542884827},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.2523674964904785},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10503655672073364}],"concepts":[{"id":"https://openalex.org/C66153294","wikidata":"https://www.wikidata.org/wiki/Q899291","display_name":"CASP","level":4,"score":0.988527774810791},{"id":"https://openalex.org/C169258074","wikidata":"https://www.wikidata.org/wiki/Q245748","display_name":"Random forest","level":2,"score":0.8872811198234558},{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.7345751523971558},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.715851902961731},{"id":"https://openalex.org/C18051474","wikidata":"https://www.wikidata.org/wiki/Q899656","display_name":"Protein structure prediction","level":3,"score":0.6131953597068787},{"id":"https://openalex.org/C192772702","wikidata":"https://www.wikidata.org/wiki/Q2583975","display_name":"Structural genomics","level":3,"score":0.5314024686813354},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.524569034576416},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3906208872795105},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.38946014642715454},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.38716569542884827},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.2523674964904785},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10503655672073364},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-319-19941-2_42","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-19941-2_42","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.7400000095367432,"display_name":"Life in Land","id":"https://metadata.un.org/sdg/15"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":35,"referenced_works":["https://openalex.org/W35601271","https://openalex.org/W1592614241","https://openalex.org/W1973262365","https://openalex.org/W1987419278","https://openalex.org/W1995106824","https://openalex.org/W1995328486","https://openalex.org/W1996150123","https://openalex.org/W1996202672","https://openalex.org/W1996719883","https://openalex.org/W1997706170","https://openalex.org/W2014731953","https://openalex.org/W2023925702","https://openalex.org/W2027446338","https://openalex.org/W2045267263","https://openalex.org/W2092182190","https://openalex.org/W2096586347","https://openalex.org/W2101234009","https://openalex.org/W2104703176","https://openalex.org/W2106119381","https://openalex.org/W2109801072","https://openalex.org/W2116772258","https://openalex.org/W2119542589","https://openalex.org/W2119939131","https://openalex.org/W2120804283","https://openalex.org/W2129834345","https://openalex.org/W2130479394","https://openalex.org/W2144252381","https://openalex.org/W2147526198","https://openalex.org/W2155144535","https://openalex.org/W2162381238","https://openalex.org/W2911964244","https://openalex.org/W3047916294","https://openalex.org/W3199104097","https://openalex.org/W3201413583","https://openalex.org/W6812872851"],"related_works":["https://openalex.org/W2406009210","https://openalex.org/W2411998238","https://openalex.org/W3198923619","https://openalex.org/W2093959518","https://openalex.org/W2334085108","https://openalex.org/W3199799076","https://openalex.org/W2965048554","https://openalex.org/W2561391236","https://openalex.org/W1599064615","https://openalex.org/W2283086173"],"abstract_inverted_index":null,"counts_by_year":[{"year":2017,"cited_by_count":1},{"year":2015,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
