{"id":"https://openalex.org/W820014006","doi":"https://doi.org/10.1007/978-3-319-19929-0_4","title":"Efficient Construction of a Compressed de Bruijn Graph for Pan-Genome Analysis","display_name":"Efficient Construction of a Compressed de Bruijn Graph for Pan-Genome Analysis","publication_year":2015,"publication_date":"2015-01-01","ids":{"openalex":"https://openalex.org/W820014006","doi":"https://doi.org/10.1007/978-3-319-19929-0_4","mag":"820014006"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-319-19929-0_4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-19929-0_4","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5041538875","display_name":"Timo Beller","orcid":null},"institutions":[{"id":"https://openalex.org/I196349391","display_name":"Universit\u00e4t Ulm","ror":"https://ror.org/032000t02","country_code":"DE","type":"education","lineage":["https://openalex.org/I196349391"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Timo Beller","raw_affiliation_strings":["Institute of Theoretical Computer Science, University of Ulm, 89069, Ulm, Germany"],"affiliations":[{"raw_affiliation_string":"Institute of Theoretical Computer Science, University of Ulm, 89069, Ulm, Germany","institution_ids":["https://openalex.org/I196349391"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5090763399","display_name":"Enno Ohlebusch","orcid":"https://orcid.org/0009-0008-3937-3652"},"institutions":[{"id":"https://openalex.org/I196349391","display_name":"Universit\u00e4t Ulm","ror":"https://ror.org/032000t02","country_code":"DE","type":"education","lineage":["https://openalex.org/I196349391"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Enno Ohlebusch","raw_affiliation_strings":["Institute of Theoretical Computer Science, University of Ulm, 89069, Ulm, Germany"],"affiliations":[{"raw_affiliation_string":"Institute of Theoretical Computer Science, University of Ulm, 89069, Ulm, Germany","institution_ids":["https://openalex.org/I196349391"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5041538875"],"corresponding_institution_ids":["https://openalex.org/I196349391"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":4.2502,"has_fulltext":false,"cited_by_count":17,"citation_normalized_percentile":{"value":0.94543737,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"40","last_page":"51"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9937000274658203,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/de-bruijn-graph","display_name":"De Bruijn graph","score":0.8319796919822693},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7761532068252563},{"id":"https://openalex.org/keywords/de-bruijn-sequence","display_name":"De Bruijn sequence","score":0.7218724489212036},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.4591301381587982},{"id":"https://openalex.org/keywords/graph-theory","display_name":"Graph theory","score":0.41483357548713684},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3663061261177063},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.1642751693725586},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1357901394367218}],"concepts":[{"id":"https://openalex.org/C20218877","wikidata":"https://www.wikidata.org/wiki/Q3066095","display_name":"De Bruijn graph","level":3,"score":0.8319796919822693},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7761532068252563},{"id":"https://openalex.org/C170320093","wikidata":"https://www.wikidata.org/wiki/Q1953457","display_name":"De Bruijn sequence","level":2,"score":0.7218724489212036},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.4591301381587982},{"id":"https://openalex.org/C88230418","wikidata":"https://www.wikidata.org/wiki/Q131476","display_name":"Graph theory","level":2,"score":0.41483357548713684},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3663061261177063},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.1642751693725586},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1357901394367218}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-319-19929-0_4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-19929-0_4","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":26,"referenced_works":["https://openalex.org/W77861361","https://openalex.org/W80321102","https://openalex.org/W149739310","https://openalex.org/W1573352354","https://openalex.org/W1577336816","https://openalex.org/W1944059350","https://openalex.org/W1962019683","https://openalex.org/W1976682045","https://openalex.org/W1993817276","https://openalex.org/W2042175004","https://openalex.org/W2127901812","https://openalex.org/W2129264270","https://openalex.org/W2134199796","https://openalex.org/W2134283755","https://openalex.org/W2134696992","https://openalex.org/W2137346250","https://openalex.org/W2137351413","https://openalex.org/W2141850746","https://openalex.org/W2149243190","https://openalex.org/W2151453116","https://openalex.org/W2158322625","https://openalex.org/W2161488606","https://openalex.org/W2163338240","https://openalex.org/W2299901589","https://openalex.org/W2407929722","https://openalex.org/W2688497151"],"related_works":["https://openalex.org/W2562683361","https://openalex.org/W3087469195","https://openalex.org/W3125399386","https://openalex.org/W2354744388","https://openalex.org/W2949121831","https://openalex.org/W3215786367","https://openalex.org/W2122316710","https://openalex.org/W4301429973","https://openalex.org/W2951695076","https://openalex.org/W1964377951"],"abstract_inverted_index":null,"counts_by_year":[{"year":2021,"cited_by_count":4},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":6},{"year":2015,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}