{"id":"https://openalex.org/W72581589","doi":"https://doi.org/10.1007/978-3-319-16480-9_54","title":"isDNA: A Tool for Real-Time Visualization of Plasmid DNA Monte-Carlo Simulations in 3D","display_name":"isDNA: A Tool for Real-Time Visualization of Plasmid DNA Monte-Carlo Simulations in 3D","publication_year":2015,"publication_date":"2015-01-01","ids":{"openalex":"https://openalex.org/W72581589","doi":"https://doi.org/10.1007/978-3-319-16480-9_54","mag":"72581589"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-319-16480-9_54","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-16480-9_54","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5031896634","display_name":"Adriano N. Raposo","orcid":"https://orcid.org/0000-0002-7432-7474"},"institutions":[{"id":"https://openalex.org/I161321875","display_name":"University of Beira Interior","ror":"https://ror.org/03nf36p02","country_code":"PT","type":"education","lineage":["https://openalex.org/I161321875"]},{"id":"https://openalex.org/I4210120471","display_name":"Instituto de Telecomunica\u00e7\u00f5es","ror":"https://ror.org/02ht4fk33","country_code":"PT","type":"nonprofit","lineage":["https://openalex.org/I4210120471"]}],"countries":["PT"],"is_corresponding":true,"raw_author_name":"Adriano N. Raposo","raw_affiliation_strings":["Instituto de Telecomunica\u00e7\u00f5es, Universidade da Beira Interior, Av. Marqu\u00eas D\u2019Avila e Bolama, 6200-001, Covilh\u00e3, Portugal","Instituto de Telecomunica\u00e7\u00f5es, Universidade da Beira Interior, Av. Marqu\u00eas D'Avila e Bolama, 6200-001, Covilh\u00e3, Portugal"],"affiliations":[{"raw_affiliation_string":"Instituto de Telecomunica\u00e7\u00f5es, Universidade da Beira Interior, Av. Marqu\u00eas D\u2019Avila e Bolama, 6200-001, Covilh\u00e3, Portugal","institution_ids":["https://openalex.org/I161321875","https://openalex.org/I4210120471"]},{"raw_affiliation_string":"Instituto de Telecomunica\u00e7\u00f5es, Universidade da Beira Interior, Av. Marqu\u00eas D'Avila e Bolama, 6200-001, Covilh\u00e3, Portugal","institution_ids":["https://openalex.org/I161321875","https://openalex.org/I4210120471"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5053666594","display_name":"Abel Gomes","orcid":"https://orcid.org/0000-0002-5804-5717"},"institutions":[{"id":"https://openalex.org/I4210120471","display_name":"Instituto de Telecomunica\u00e7\u00f5es","ror":"https://ror.org/02ht4fk33","country_code":"PT","type":"nonprofit","lineage":["https://openalex.org/I4210120471"]},{"id":"https://openalex.org/I161321875","display_name":"University of Beira Interior","ror":"https://ror.org/03nf36p02","country_code":"PT","type":"education","lineage":["https://openalex.org/I161321875"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Abel J. P. Gomes","raw_affiliation_strings":["Instituto de Telecomunica\u00e7\u00f5es, Universidade da Beira Interior, Av. Marqu\u00eas D\u2019Avila e Bolama, 6200-001, Covilh\u00e3, Portugal","Instituto de Telecomunica\u00e7\u00f5es, Universidade da Beira Interior, Av. Marqu\u00eas D'Avila e Bolama, 6200-001, Covilh\u00e3, Portugal"],"affiliations":[{"raw_affiliation_string":"Instituto de Telecomunica\u00e7\u00f5es, Universidade da Beira Interior, Av. Marqu\u00eas D\u2019Avila e Bolama, 6200-001, Covilh\u00e3, Portugal","institution_ids":["https://openalex.org/I161321875","https://openalex.org/I4210120471"]},{"raw_affiliation_string":"Instituto de Telecomunica\u00e7\u00f5es, Universidade da Beira Interior, Av. Marqu\u00eas D'Avila e Bolama, 6200-001, Covilh\u00e3, Portugal","institution_ids":["https://openalex.org/I161321875","https://openalex.org/I4210120471"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5031896634"],"corresponding_institution_ids":["https://openalex.org/I161321875","https://openalex.org/I4210120471"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.6184,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.65004496,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"566","last_page":"577"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10432","display_name":"DNA and Nucleic Acid Chemistry","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10432","display_name":"DNA and Nucleic Acid Chemistry","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":0.9958000183105469,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/monte-carlo-method","display_name":"Monte Carlo method","score":0.6870249509811401},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6817017197608948},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6753712296485901},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.5292037725448608},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5199381113052368},{"id":"https://openalex.org/keywords/computational-science","display_name":"Computational science","score":0.46224308013916016},{"id":"https://openalex.org/keywords/gaussian","display_name":"Gaussian","score":0.4583016037940979},{"id":"https://openalex.org/keywords/plasmid","display_name":"Plasmid","score":0.41894179582595825},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3318251669406891},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.1946442723274231},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.1779630482196808},{"id":"https://openalex.org/keywords/computational-chemistry","display_name":"Computational chemistry","score":0.10813134908676147},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.0991748571395874},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.0961628258228302},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.08293148875236511}],"concepts":[{"id":"https://openalex.org/C19499675","wikidata":"https://www.wikidata.org/wiki/Q232207","display_name":"Monte Carlo method","level":2,"score":0.6870249509811401},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6817017197608948},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6753712296485901},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.5292037725448608},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5199381113052368},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.46224308013916016},{"id":"https://openalex.org/C163716315","wikidata":"https://www.wikidata.org/wiki/Q901177","display_name":"Gaussian","level":2,"score":0.4583016037940979},{"id":"https://openalex.org/C22744801","wikidata":"https://www.wikidata.org/wiki/Q172778","display_name":"Plasmid","level":3,"score":0.41894179582595825},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3318251669406891},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.1946442723274231},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.1779630482196808},{"id":"https://openalex.org/C147597530","wikidata":"https://www.wikidata.org/wiki/Q369472","display_name":"Computational chemistry","level":1,"score":0.10813134908676147},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0991748571395874},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0961628258228302},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.08293148875236511},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-319-16480-9_54","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-16480-9_54","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":28,"referenced_works":["https://openalex.org/W160347429","https://openalex.org/W209347310","https://openalex.org/W1678592537","https://openalex.org/W1974089947","https://openalex.org/W1977334225","https://openalex.org/W1980722147","https://openalex.org/W2002434434","https://openalex.org/W2032183039","https://openalex.org/W2032820551","https://openalex.org/W2040483083","https://openalex.org/W2047052655","https://openalex.org/W2050843661","https://openalex.org/W2053919457","https://openalex.org/W2056760934","https://openalex.org/W2071321615","https://openalex.org/W2090783513","https://openalex.org/W2091976545","https://openalex.org/W2103325328","https://openalex.org/W2135333416","https://openalex.org/W2139064328","https://openalex.org/W2141877184","https://openalex.org/W2155677643","https://openalex.org/W2160456562","https://openalex.org/W2171242549","https://openalex.org/W2238882387","https://openalex.org/W2992903721","https://openalex.org/W4253191544","https://openalex.org/W4388362576"],"related_works":["https://openalex.org/W4388965752","https://openalex.org/W2429129060","https://openalex.org/W2750385014","https://openalex.org/W2908588478","https://openalex.org/W2114870167","https://openalex.org/W2409844362","https://openalex.org/W2890718724","https://openalex.org/W1984664666","https://openalex.org/W2114174502","https://openalex.org/W2124914878"],"abstract_inverted_index":null,"counts_by_year":[{"year":2019,"cited_by_count":1},{"year":2015,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}