{"id":"https://openalex.org/W1598224918","doi":"https://doi.org/10.1007/978-3-319-13560-1_12","title":"Amino Acids Pattern-Biased Spiral Search for Protein Structure Prediction","display_name":"Amino Acids Pattern-Biased Spiral Search for Protein Structure Prediction","publication_year":2014,"publication_date":"2014-01-01","ids":{"openalex":"https://openalex.org/W1598224918","doi":"https://doi.org/10.1007/978-3-319-13560-1_12","mag":"1598224918"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-319-13560-1_12","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-13560-1_12","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5086125031","display_name":"Mahmood A. Rashid","orcid":"https://orcid.org/0000-0003-3347-2381"},"institutions":[{"id":"https://openalex.org/I11701301","display_name":"Griffith University","ror":"https://ror.org/02sc3r913","country_code":"AU","type":"education","lineage":["https://openalex.org/I11701301"]},{"id":"https://openalex.org/I42894916","display_name":"Data61","ror":"https://ror.org/03q397159","country_code":"AU","type":"other","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I42894916","https://openalex.org/I4387156119"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Mahmood A. Rashid","raw_affiliation_strings":["Institute for Integrated & Intelligent Systems, Griffith University, Australia","Queensland Research Lab, National ICT Australia, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Integrated & Intelligent Systems, Griffith University, Australia","institution_ids":["https://openalex.org/I11701301"]},{"raw_affiliation_string":"Queensland Research Lab, National ICT Australia, Australia","institution_ids":["https://openalex.org/I42894916"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071233592","display_name":"Md Masbaul Alam Polash","orcid":"https://orcid.org/0000-0001-8922-7938"},"institutions":[{"id":"https://openalex.org/I11701301","display_name":"Griffith University","ror":"https://ror.org/02sc3r913","country_code":"AU","type":"education","lineage":["https://openalex.org/I11701301"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Md. Masbaul Alam Polash","raw_affiliation_strings":["Institute for Integrated & Intelligent Systems, Griffith University, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Integrated & Intelligent Systems, Griffith University, Australia","institution_ids":["https://openalex.org/I11701301"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086354302","display_name":"M. A. Hakim Newton","orcid":"https://orcid.org/0000-0001-5655-0683"},"institutions":[{"id":"https://openalex.org/I11701301","display_name":"Griffith University","ror":"https://ror.org/02sc3r913","country_code":"AU","type":"education","lineage":["https://openalex.org/I11701301"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"M. A. Hakim Newton","raw_affiliation_strings":["Institute for Integrated & Intelligent Systems, Griffith University, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Integrated & Intelligent Systems, Griffith University, Australia","institution_ids":["https://openalex.org/I11701301"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055092646","display_name":"Md Tamjidul Hoque","orcid":"https://orcid.org/0000-0002-0110-2194"},"institutions":[{"id":"https://openalex.org/I192396691","display_name":"University of New Orleans","ror":"https://ror.org/034mtvk83","country_code":"US","type":"education","lineage":["https://openalex.org/I192396691","https://openalex.org/I2799628689"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Md. Tamjidul Hoque","raw_affiliation_strings":["Computer Science, University of New Orleans, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Science, University of New Orleans, USA","institution_ids":["https://openalex.org/I192396691"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5038675407","display_name":"Abdul Sattar","orcid":"https://orcid.org/0000-0002-2567-2052"},"institutions":[{"id":"https://openalex.org/I11701301","display_name":"Griffith University","ror":"https://ror.org/02sc3r913","country_code":"AU","type":"education","lineage":["https://openalex.org/I11701301"]},{"id":"https://openalex.org/I42894916","display_name":"Data61","ror":"https://ror.org/03q397159","country_code":"AU","type":"other","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I42894916","https://openalex.org/I4387156119"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Abdul Sattar","raw_affiliation_strings":["Institute for Integrated & Intelligent Systems, Griffith University, Australia","Queensland Research Lab, National ICT Australia, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Integrated & Intelligent Systems, Griffith University, Australia","institution_ids":["https://openalex.org/I11701301"]},{"raw_affiliation_string":"Queensland Research Lab, National ICT Australia, Australia","institution_ids":["https://openalex.org/I42894916"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"143","last_page":"156"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9865999817848206,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/spiral","display_name":"Spiral (railway)","score":0.7124961614608765},{"id":"https://openalex.org/keywords/amino-acid","display_name":"Amino acid","score":0.678525447845459},{"id":"https://openalex.org/keywords/heuristic","display_name":"Heuristic","score":0.6439441442489624},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.6288473606109619},{"id":"https://openalex.org/keywords/tabu-search","display_name":"Tabu search","score":0.6258256435394287},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6088175773620605},{"id":"https://openalex.org/keywords/folding","display_name":"Folding (DSP implementation)","score":0.5545284152030945},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5286142230033875},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4929980933666229},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.48287490010261536},{"id":"https://openalex.org/keywords/core","display_name":"Core (optical fiber)","score":0.45148828625679016},{"id":"https://openalex.org/keywords/protein-structure-prediction","display_name":"Protein structure prediction","score":0.44146043062210083},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.42687681317329407},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.4144282639026642},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2835384011268616},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.21153384447097778},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.1937178373336792},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.16693350672721863},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.0925714373588562}],"concepts":[{"id":"https://openalex.org/C174128100","wikidata":"https://www.wikidata.org/wiki/Q846907","display_name":"Spiral (railway)","level":2,"score":0.7124961614608765},{"id":"https://openalex.org/C515207424","wikidata":"https://www.wikidata.org/wiki/Q8066","display_name":"Amino acid","level":2,"score":0.678525447845459},{"id":"https://openalex.org/C173801870","wikidata":"https://www.wikidata.org/wiki/Q201413","display_name":"Heuristic","level":2,"score":0.6439441442489624},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.6288473606109619},{"id":"https://openalex.org/C123370116","wikidata":"https://www.wikidata.org/wiki/Q1424540","display_name":"Tabu search","level":2,"score":0.6258256435394287},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6088175773620605},{"id":"https://openalex.org/C2776545253","wikidata":"https://www.wikidata.org/wiki/Q5464292","display_name":"Folding (DSP implementation)","level":2,"score":0.5545284152030945},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5286142230033875},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4929980933666229},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.48287490010261536},{"id":"https://openalex.org/C2164484","wikidata":"https://www.wikidata.org/wiki/Q5170150","display_name":"Core (optical fiber)","level":2,"score":0.45148828625679016},{"id":"https://openalex.org/C18051474","wikidata":"https://www.wikidata.org/wiki/Q899656","display_name":"Protein structure prediction","level":3,"score":0.44146043062210083},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.42687681317329407},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.4144282639026642},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2835384011268616},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.21153384447097778},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.1937178373336792},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.16693350672721863},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0925714373588562},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/978-3-319-13560-1_12","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-13560-1_12","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:eprints.vu.edu.au:38576","is_oa":false,"landing_page_url":"https://vuir.vu.edu.au/38576/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400215","display_name":"Victoria University Research Repository (Victoria University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I41156924","host_organization_name":"Victoria University of Wellington","host_organization_lineage":["https://openalex.org/I41156924"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Conference or Workshop Item"},{"id":"pmh:oai:research-repository.griffith.edu.au:10072/67848","is_oa":false,"landing_page_url":"http://hdl.handle.net/10072/67848","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Conference output"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":38,"referenced_works":["https://openalex.org/W113688923","https://openalex.org/W123766325","https://openalex.org/W1539892855","https://openalex.org/W1561877279","https://openalex.org/W1564001275","https://openalex.org/W1586750735","https://openalex.org/W1648987778","https://openalex.org/W1977453933","https://openalex.org/W1984527736","https://openalex.org/W1989415425","https://openalex.org/W2002930355","https://openalex.org/W2011495938","https://openalex.org/W2013205100","https://openalex.org/W2019158263","https://openalex.org/W2033475723","https://openalex.org/W2045777307","https://openalex.org/W2048583196","https://openalex.org/W2063087637","https://openalex.org/W2070292124","https://openalex.org/W2077390161","https://openalex.org/W2088025175","https://openalex.org/W2092292464","https://openalex.org/W2100356383","https://openalex.org/W2124848384","https://openalex.org/W2129469300","https://openalex.org/W2137105118","https://openalex.org/W2154811699","https://openalex.org/W2156381947","https://openalex.org/W2158229944","https://openalex.org/W2159130720","https://openalex.org/W2159914116","https://openalex.org/W2162042205","https://openalex.org/W2166912610","https://openalex.org/W2170471837","https://openalex.org/W2171283513","https://openalex.org/W2477408078","https://openalex.org/W4239274321","https://openalex.org/W4246356731"],"related_works":["https://openalex.org/W2946599741","https://openalex.org/W2593264178","https://openalex.org/W2043066834","https://openalex.org/W3171039768","https://openalex.org/W2136856901","https://openalex.org/W2368468053","https://openalex.org/W2058542300","https://openalex.org/W1564749278","https://openalex.org/W2294851134","https://openalex.org/W3215498386"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
