{"id":"https://openalex.org/W2163553204","doi":"https://doi.org/10.1007/978-3-319-12418-6_4","title":"FUNN-MG: A Metagenomic Systems Biology Computational Framework","display_name":"FUNN-MG: A Metagenomic Systems Biology Computational Framework","publication_year":2014,"publication_date":"2014-01-01","ids":{"openalex":"https://openalex.org/W2163553204","doi":"https://doi.org/10.1007/978-3-319-12418-6_4","mag":"2163553204"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-319-12418-6_4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-12418-6_4","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5029972366","display_name":"Leandro Corr\u00eaa","orcid":null},"institutions":[{"id":"https://openalex.org/I59606676","display_name":"Universidade Federal do Par\u00e1","ror":"https://ror.org/03q9sr818","country_code":"BR","type":"education","lineage":["https://openalex.org/I59606676"]}],"countries":["BR"],"is_corresponding":true,"raw_author_name":"Leandro Corr\u00eaa","raw_affiliation_strings":["PPGCC, Universidade Federal do Par\u00e1, Bel\u00e9m, Brazil"],"affiliations":[{"raw_affiliation_string":"PPGCC, Universidade Federal do Par\u00e1, Bel\u00e9m, Brazil","institution_ids":["https://openalex.org/I59606676"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000457683","display_name":"Ronnie Alves","orcid":"https://orcid.org/0000-0003-4139-0562"},"institutions":[{"id":"https://openalex.org/I4210101743","display_name":"Laboratoire d'Informatique, de Robotique et de Micro\u00e9lectronique de Montpellier","ror":"https://ror.org/013yean28","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I151295451","https://openalex.org/I19894307","https://openalex.org/I4210101743","https://openalex.org/I4210159245","https://openalex.org/I4412460525"]},{"id":"https://openalex.org/I59606676","display_name":"Universidade Federal do Par\u00e1","ror":"https://ror.org/03q9sr818","country_code":"BR","type":"education","lineage":["https://openalex.org/I59606676"]},{"id":"https://openalex.org/I19894307","display_name":"Universit\u00e9 de Montpellier","ror":"https://ror.org/051escj72","country_code":"FR","type":"education","lineage":["https://openalex.org/I19894307"]},{"id":"https://openalex.org/I4210142014","display_name":"Institut Montpelli\u00e9rain Alexander Grothendieck","ror":"https://ror.org/044kxby82","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I19894307","https://openalex.org/I4210141950","https://openalex.org/I4210142014"]}],"countries":["BR","FR"],"is_corresponding":false,"raw_author_name":"Ronnie Alves","raw_affiliation_strings":["Institut de Biologie Computationnelle, Montpellier, France","Laboratoire d\u2019Informatique, de Robotique et de Micro\u00e9lectronique de Montpellier, UMR 5506, Universit\u00e9 Montpellier 2, Centre National de la Recherche Scientifique, Montpellier, France","PPGCC, Universidade Federal do Par\u00e1, Bel\u00e9m, Brazil"],"affiliations":[{"raw_affiliation_string":"Institut de Biologie Computationnelle, Montpellier, France","institution_ids":["https://openalex.org/I4210142014"]},{"raw_affiliation_string":"Laboratoire d\u2019Informatique, de Robotique et de Micro\u00e9lectronique de Montpellier, UMR 5506, Universit\u00e9 Montpellier 2, Centre National de la Recherche Scientifique, Montpellier, France","institution_ids":["https://openalex.org/I19894307","https://openalex.org/I4210101743"]},{"raw_affiliation_string":"PPGCC, Universidade Federal do Par\u00e1, Bel\u00e9m, Brazil","institution_ids":["https://openalex.org/I59606676"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027075322","display_name":"Fabiana Rodrigues de G\u00f3es","orcid":"https://orcid.org/0000-0002-2423-1132"},"institutions":[{"id":"https://openalex.org/I59606676","display_name":"Universidade Federal do Par\u00e1","ror":"https://ror.org/03q9sr818","country_code":"BR","type":"education","lineage":["https://openalex.org/I59606676"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Fabiana Go\u00e9s","raw_affiliation_strings":["PPGCC, Universidade Federal do Par\u00e1, Bel\u00e9m, Brazil"],"affiliations":[{"raw_affiliation_string":"PPGCC, Universidade Federal do Par\u00e1, Bel\u00e9m, Brazil","institution_ids":["https://openalex.org/I59606676"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016451177","display_name":"Cristian Chaparro","orcid":"https://orcid.org/0000-0002-5162-349X"},"institutions":[{"id":"https://openalex.org/I59606676","display_name":"Universidade Federal do Par\u00e1","ror":"https://ror.org/03q9sr818","country_code":"BR","type":"education","lineage":["https://openalex.org/I59606676"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Cristian Chaparro","raw_affiliation_strings":["PPGCC, Universidade Federal do Par\u00e1, Bel\u00e9m, Brazil"],"affiliations":[{"raw_affiliation_string":"PPGCC, Universidade Federal do Par\u00e1, Bel\u00e9m, Brazil","institution_ids":["https://openalex.org/I59606676"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5043117164","display_name":"Lucin\u00e9ia Heloisa Thom","orcid":"https://orcid.org/0000-0002-0620-9302"},"institutions":[{"id":"https://openalex.org/I130442723","display_name":"Universidade Federal do Rio Grande do Sul","ror":"https://ror.org/041yk2d64","country_code":"BR","type":"education","lineage":["https://openalex.org/I130442723"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Lucin\u00e9ia Thom","raw_affiliation_strings":["PPGC, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil"],"affiliations":[{"raw_affiliation_string":"PPGC, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil","institution_ids":["https://openalex.org/I130442723"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5029972366"],"corresponding_institution_ids":["https://openalex.org/I59606676"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.4976,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.67692701,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"25","last_page":"32"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metagenomics","display_name":"Metagenomics","score":0.909440815448761},{"id":"https://openalex.org/keywords/microbiome","display_name":"Microbiome","score":0.6042785048484802},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5670042634010315},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5570319890975952},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5097364783287048},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.4915245473384857},{"id":"https://openalex.org/keywords/key","display_name":"Key (lock)","score":0.41821256279945374},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.393640398979187},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3287484645843506},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.3256470561027527},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2109638750553131},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.19559124112129211}],"concepts":[{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.909440815448761},{"id":"https://openalex.org/C143121216","wikidata":"https://www.wikidata.org/wiki/Q1330402","display_name":"Microbiome","level":2,"score":0.6042785048484802},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5670042634010315},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5570319890975952},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5097364783287048},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.4915245473384857},{"id":"https://openalex.org/C26517878","wikidata":"https://www.wikidata.org/wiki/Q228039","display_name":"Key (lock)","level":2,"score":0.41821256279945374},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.393640398979187},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3287484645843506},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.3256470561027527},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2109638750553131},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.19559124112129211},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-319-12418-6_4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-12418-6_4","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/15","display_name":"Life in Land","score":0.6499999761581421}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":8,"referenced_works":["https://openalex.org/W1998767819","https://openalex.org/W2003099302","https://openalex.org/W2006465310","https://openalex.org/W2071475385","https://openalex.org/W2083045667","https://openalex.org/W2124637227","https://openalex.org/W2133579817","https://openalex.org/W2144305584"],"related_works":["https://openalex.org/W638577851","https://openalex.org/W2968354375","https://openalex.org/W2359440920","https://openalex.org/W2889550857","https://openalex.org/W3013372948","https://openalex.org/W3135997498","https://openalex.org/W4242417330","https://openalex.org/W3198631238","https://openalex.org/W4388282505","https://openalex.org/W3139084279"],"abstract_inverted_index":null,"counts_by_year":[{"year":2015,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
