{"id":"https://openalex.org/W157648571","doi":"https://doi.org/10.1007/978-3-319-02624-4_19","title":"A Pipeline to Characterize Virulence Factors in Mycobacterium Massiliense Genome","display_name":"A Pipeline to Characterize Virulence Factors in Mycobacterium Massiliense Genome","publication_year":2013,"publication_date":"2013-01-01","ids":{"openalex":"https://openalex.org/W157648571","doi":"https://doi.org/10.1007/978-3-319-02624-4_19","mag":"157648571"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-319-02624-4_19","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-02624-4_19","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5088184754","display_name":"Guilherme Meneg\u00f3i","orcid":null},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Guilherme Meneg\u00f3i","raw_affiliation_strings":["Department of Cellular Biology, Institute of Biology, University of Brasilia, 70910-900, Bras\u00edlia, DF, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Cellular Biology, Institute of Biology, University of Brasilia, 70910-900, Bras\u00edlia, DF, Brazil","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072259448","display_name":"Tain\u00e1 Raiol","orcid":"https://orcid.org/0000-0001-9948-5164"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Tain\u00e1 Raiol","raw_affiliation_strings":["Department of Cellular Biology, Institute of Biology, University of Brasilia, 70910-900, Bras\u00edlia, DF, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Cellular Biology, Institute of Biology, University of Brasilia, 70910-900, Bras\u00edlia, DF, Brazil","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103355494","display_name":"Jo\u00e3o Victor de Ara\u00fajo Oliveira","orcid":null},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Jo\u00e3o Victor de Ara\u00fajo Oliveira","raw_affiliation_strings":["Department of Computer Science, Institute of Exact Sciences, University of Brasilia, 70910-900, Bras\u00edlia, DF, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Institute of Exact Sciences, University of Brasilia, 70910-900, Bras\u00edlia, DF, Brazil","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058639233","display_name":"Edans F. O. Sandes","orcid":"https://orcid.org/0000-0001-9502-7799"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Edans Fl\u00e1vius de Oliveira Sandes","raw_affiliation_strings":["Department of Computer Science, Institute of Exact Sciences, University of Brasilia, 70910-900, Bras\u00edlia, DF, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Institute of Exact Sciences, University of Brasilia, 70910-900, Bras\u00edlia, DF, Brazil","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005717412","display_name":"Alba Cristina Magalh\u00e3es Alves de Melo","orcid":"https://orcid.org/0000-0001-5191-5209"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Alba Cristina Magalh\u00e3es Alves de Melo","raw_affiliation_strings":["Department of Computer Science, Institute of Exact Sciences, University of Brasilia, 70910-900, Bras\u00edlia, DF, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Institute of Exact Sciences, University of Brasilia, 70910-900, Bras\u00edlia, DF, Brazil","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052250864","display_name":"Andr\u00e9a Queir\u00f3z Maranh\u00e3o","orcid":"https://orcid.org/0000-0002-1946-7191"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Andr\u00e9a Queiroz Maranh\u00e3o","raw_affiliation_strings":["Department of Cellular Biology, Institute of Biology, University of Brasilia, 70910-900, Bras\u00edlia, DF, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Cellular Biology, Institute of Biology, University of Brasilia, 70910-900, Bras\u00edlia, DF, Brazil","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050790124","display_name":"Ildinete Silva-Pereira","orcid":"https://orcid.org/0000-0003-1403-9363"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Ildinete Silva-Pereira","raw_affiliation_strings":["Department of Cellular Biology, Institute of Biology, University of Brasilia, 70910-900, Bras\u00edlia, DF, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Cellular Biology, Institute of Biology, University of Brasilia, 70910-900, Bras\u00edlia, DF, Brazil","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028141163","display_name":"Anam\u00e9lia Lorenzetti Bocca","orcid":"https://orcid.org/0000-0003-3323-5300"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Anam\u00e9lia Lorenzetti Bocca","raw_affiliation_strings":["Department of Cellular Biology, Institute of Biology, University of Brasilia, 70910-900, Bras\u00edlia, DF, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Cellular Biology, Institute of Biology, University of Brasilia, 70910-900, Bras\u00edlia, DF, Brazil","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042892823","display_name":"Ana Paula Junqueira\u2010Kipnis","orcid":"https://orcid.org/0000-0002-4200-6617"},"institutions":[{"id":"https://openalex.org/I68106152","display_name":"Universidade Federal de Goi\u00e1s","ror":"https://ror.org/0039d5757","country_code":"BR","type":"education","lineage":["https://openalex.org/I68106152"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Ana Paula Junqueira-Kipnis","raw_affiliation_strings":["Department of Microbiology, Immunology, Parasitology, and Pathology, Federal University of Goi\u00e1s, 74605-050, Goi\u00e2nia, GO, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology, Immunology, Parasitology, and Pathology, Federal University of Goi\u00e1s, 74605-050, Goi\u00e2nia, GO, Brazil","institution_ids":["https://openalex.org/I68106152"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071276748","display_name":"Maria Em\u00edlia M. T. Walter","orcid":"https://orcid.org/0000-0001-6822-931X"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Maria Em\u00edlia M. T. Walter","raw_affiliation_strings":["Department of Computer Science, Institute of Exact Sciences, University of Brasilia, 70910-900, Bras\u00edlia, DF, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Institute of Exact Sciences, University of Brasilia, 70910-900, Bras\u00edlia, DF, Brazil","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006615429","display_name":"Andr\u00e9 Kipnis","orcid":"https://orcid.org/0000-0001-5950-106X"},"institutions":[{"id":"https://openalex.org/I68106152","display_name":"Universidade Federal de Goi\u00e1s","ror":"https://ror.org/0039d5757","country_code":"BR","type":"education","lineage":["https://openalex.org/I68106152"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Andr\u00e9 Kipnis","raw_affiliation_strings":["Department of Microbiology, Immunology, Parasitology, and Pathology, Federal University of Goi\u00e1s, 74605-050, Goi\u00e2nia, GO, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology, Immunology, Parasitology, and Pathology, Federal University of Goi\u00e1s, 74605-050, Goi\u00e2nia, GO, Brazil","institution_ids":["https://openalex.org/I68106152"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5004764405","display_name":"Marcelo M. Br\u00edgido","orcid":"https://orcid.org/0000-0002-7136-7059"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Marcelo de Macedo Br\u00edgido","raw_affiliation_strings":["Department of Cellular Biology, Institute of Biology, University of Brasilia, 70910-900, Bras\u00edlia, DF, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Cellular Biology, Institute of Biology, University of Brasilia, 70910-900, Bras\u00edlia, DF, Brazil","institution_ids":["https://openalex.org/I150729083"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.02939255,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"202","last_page":"213"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11316","display_name":"Mycobacterium research and diagnosis","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11316","display_name":"Mycobacterium research and diagnosis","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9944000244140625,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":0.9847000241279602,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/virulence","display_name":"Virulence","score":0.8502541780471802},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5685914754867554},{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.5548181533813477},{"id":"https://openalex.org/keywords/virulence-factor","display_name":"Virulence factor","score":0.5493872761726379},{"id":"https://openalex.org/keywords/pathogenicity","display_name":"Pathogenicity","score":0.524511456489563},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.4887363910675049},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.46864765882492065},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.4563267230987549},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.41843000054359436},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3912785053253174},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3613027334213257},{"id":"https://openalex.org/keywords/microbiology","display_name":"Microbiology","score":0.35570016503334045},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.26886212825775146}],"concepts":[{"id":"https://openalex.org/C60987743","wikidata":"https://www.wikidata.org/wiki/Q1460232","display_name":"Virulence","level":3,"score":0.8502541780471802},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5685914754867554},{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.5548181533813477},{"id":"https://openalex.org/C2781090273","wikidata":"https://www.wikidata.org/wiki/Q1623405","display_name":"Virulence factor","level":4,"score":0.5493872761726379},{"id":"https://openalex.org/C64502627","wikidata":"https://www.wikidata.org/wiki/Q170065","display_name":"Pathogenicity","level":2,"score":0.524511456489563},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.4887363910675049},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.46864765882492065},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.4563267230987549},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.41843000054359436},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3912785053253174},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3613027334213257},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.35570016503334045},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.26886212825775146},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-319-02624-4_19","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-02624-4_19","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W45443282","https://openalex.org/W2001562182","https://openalex.org/W2005091504","https://openalex.org/W2024648909","https://openalex.org/W2037357599","https://openalex.org/W2040703580","https://openalex.org/W2055043387","https://openalex.org/W2082170426","https://openalex.org/W2114066081","https://openalex.org/W2114834842","https://openalex.org/W2117504214","https://openalex.org/W2119497560","https://openalex.org/W2153201962","https://openalex.org/W2155446033","https://openalex.org/W2159482845","https://openalex.org/W2405978957","https://openalex.org/W4285719527","https://openalex.org/W4294216483"],"related_works":["https://openalex.org/W2353716672","https://openalex.org/W2951035914","https://openalex.org/W2201859025","https://openalex.org/W2124139792","https://openalex.org/W50609149","https://openalex.org/W3212434704","https://openalex.org/W2139426682","https://openalex.org/W4238120107","https://openalex.org/W3030861211","https://openalex.org/W39499853"],"abstract_inverted_index":null,"counts_by_year":[{"year":2019,"cited_by_count":1}],"updated_date":"2026-08-04T08:18:43.703281","created_date":"2025-10-10T00:00:00"}
