{"id":"https://openalex.org/W224010543","doi":"https://doi.org/10.1007/978-3-319-02309-0_54","title":"Kalign-LCS \u2014 A More Accurate and Faster Variant of Kalign2 Algorithm for the Multiple Sequence Alignment Problem","display_name":"Kalign-LCS \u2014 A More Accurate and Faster Variant of Kalign2 Algorithm for the Multiple Sequence Alignment Problem","publication_year":2013,"publication_date":"2013-09-19","ids":{"openalex":"https://openalex.org/W224010543","doi":"https://doi.org/10.1007/978-3-319-02309-0_54","mag":"224010543"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-319-02309-0_54","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-02309-0_54","pdf_url":null,"source":{"id":"https://openalex.org/S2764905038","display_name":"Advances in intelligent systems and computing","issn_l":"2194-5357","issn":["2194-5357","2194-5365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Advances in Intelligent Systems and Computing","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5041822808","display_name":"Sebastian Deorowicz","orcid":"https://orcid.org/0000-0002-9496-733X"},"institutions":[{"id":"https://openalex.org/I119004910","display_name":"Silesian University of Technology","ror":"https://ror.org/02dyjk442","country_code":"PL","type":"education","lineage":["https://openalex.org/I119004910"]}],"countries":["PL"],"is_corresponding":true,"raw_author_name":"Sebastian Deorowicz","raw_affiliation_strings":["Institute of Informatics, Silesian University of Technology, Akademicka 16, 44-100, Gliwice, Poland"],"affiliations":[{"raw_affiliation_string":"Institute of Informatics, Silesian University of Technology, Akademicka 16, 44-100, Gliwice, Poland","institution_ids":["https://openalex.org/I119004910"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066510227","display_name":"Agnieszka Debudaj-Grabysz","orcid":null},"institutions":[{"id":"https://openalex.org/I119004910","display_name":"Silesian University of Technology","ror":"https://ror.org/02dyjk442","country_code":"PL","type":"education","lineage":["https://openalex.org/I119004910"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Agnieszka Debudaj-Grabysz","raw_affiliation_strings":["Institute of Informatics, Silesian University of Technology, Akademicka 16, 44-100, Gliwice, Poland"],"affiliations":[{"raw_affiliation_string":"Institute of Informatics, Silesian University of Technology, Akademicka 16, 44-100, Gliwice, Poland","institution_ids":["https://openalex.org/I119004910"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5017711795","display_name":"Adam Gudy\u015b","orcid":"https://orcid.org/0000-0002-5508-0090"},"institutions":[{"id":"https://openalex.org/I119004910","display_name":"Silesian University of Technology","ror":"https://ror.org/02dyjk442","country_code":"PL","type":"education","lineage":["https://openalex.org/I119004910"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Adam Gudy\u015b","raw_affiliation_strings":["Institute of Informatics, Silesian University of Technology, Akademicka 16, 44-100, Gliwice, Poland"],"affiliations":[{"raw_affiliation_string":"Institute of Informatics, Silesian University of Technology, Akademicka 16, 44-100, Gliwice, Poland","institution_ids":["https://openalex.org/I119004910"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5041822808"],"corresponding_institution_ids":["https://openalex.org/I119004910"],"apc_list":null,"apc_paid":null,"fwci":2.9008,"has_fulltext":false,"cited_by_count":10,"citation_normalized_percentile":{"value":0.90902355,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"495","last_page":"502"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9919000267982483,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9908999800682068,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.6658949255943298},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.6619580984115601},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6152921915054321},{"id":"https://openalex.org/keywords/multiple-sequence-alignment","display_name":"Multiple sequence alignment","score":0.5173075199127197},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.1838890016078949},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.12155759334564209},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.07294824719429016},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.024265527725219727}],"concepts":[{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.6658949255943298},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.6619580984115601},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6152921915054321},{"id":"https://openalex.org/C88031987","wikidata":"https://www.wikidata.org/wiki/Q1377767","display_name":"Multiple sequence alignment","level":5,"score":0.5173075199127197},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.1838890016078949},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.12155759334564209},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.07294824719429016},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.024265527725219727},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-319-02309-0_54","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-02309-0_54","pdf_url":null,"source":{"id":"https://openalex.org/S2764905038","display_name":"Advances in intelligent systems and computing","issn_l":"2194-5357","issn":["2194-5357","2194-5365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Advances in Intelligent Systems and Computing","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W1590240800","https://openalex.org/W1974326986","https://openalex.org/W2057887529","https://openalex.org/W2106882534","https://openalex.org/W2108215151","https://openalex.org/W2110241016","https://openalex.org/W2120866529","https://openalex.org/W2127322768","https://openalex.org/W2127774996","https://openalex.org/W2136570298","https://openalex.org/W2140872496","https://openalex.org/W2143292980","https://openalex.org/W2144362290","https://openalex.org/W2170831688","https://openalex.org/W2333286882","https://openalex.org/W2407774140","https://openalex.org/W4246055527","https://openalex.org/W4298870595"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2051487156","https://openalex.org/W2073681303","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2382290278","https://openalex.org/W2478288626","https://openalex.org/W4391913857"],"abstract_inverted_index":null,"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
