{"id":"https://openalex.org/W59589783","doi":"https://doi.org/10.1007/978-3-319-00578-2_12","title":"Boosting the Detection of Transposable Elements Using Machine Learning","display_name":"Boosting the Detection of Transposable Elements Using Machine Learning","publication_year":2013,"publication_date":"2013-01-01","ids":{"openalex":"https://openalex.org/W59589783","doi":"https://doi.org/10.1007/978-3-319-00578-2_12","mag":"59589783"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-319-00578-2_12","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-00578-2_12","pdf_url":null,"source":{"id":"https://openalex.org/S2764905038","display_name":"Advances in intelligent systems and computing","issn_l":"2194-5357","issn":["2194-5357","2194-5365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Advances in Intelligent Systems and Computing","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"http://repositorio.inesctec.pt/handle/123456789/7068","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5016378511","display_name":"Tiago Loureiro","orcid":null},"institutions":[{"id":"https://openalex.org/I182534213","display_name":"Universidade do Porto","ror":"https://ror.org/043pwc612","country_code":"PT","type":"education","lineage":["https://openalex.org/I182534213"]}],"countries":["PT"],"is_corresponding":true,"raw_author_name":"Tiago Loureiro","raw_affiliation_strings":["DEI & Faculdade de Engenharia, Universidade do Porto, Porto, Portugal"],"affiliations":[{"raw_affiliation_string":"DEI & Faculdade de Engenharia, Universidade do Porto, Porto, Portugal","institution_ids":["https://openalex.org/I182534213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054960351","display_name":"Rui Camacho","orcid":"https://orcid.org/0000-0003-0940-3554"},"institutions":[{"id":"https://openalex.org/I182534213","display_name":"Universidade do Porto","ror":"https://ror.org/043pwc612","country_code":"PT","type":"education","lineage":["https://openalex.org/I182534213"]},{"id":"https://openalex.org/I4210166615","display_name":"INESC TEC","ror":"https://ror.org/05fa8ka61","country_code":"PT","type":"nonprofit","lineage":["https://openalex.org/I4210125590","https://openalex.org/I4210166615"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Rui Camacho","raw_affiliation_strings":["DEI & Faculdade de Engenharia & LIAAD-INESCTEC, Universidade do Porto, Porto, Portugal"],"affiliations":[{"raw_affiliation_string":"DEI & Faculdade de Engenharia & LIAAD-INESCTEC, Universidade do Porto, Porto, Portugal","institution_ids":["https://openalex.org/I182534213","https://openalex.org/I4210166615"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015978945","display_name":"Jorge Vieira","orcid":"https://orcid.org/0000-0001-7032-5220"},"institutions":[{"id":"https://openalex.org/I182534213","display_name":"Universidade do Porto","ror":"https://ror.org/043pwc612","country_code":"PT","type":"education","lineage":["https://openalex.org/I182534213"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Jorge Vieira","raw_affiliation_strings":["IBMC - Instituto de Biologia Molecular e Celular & Universidade do Porto, Porto, Portugal"],"affiliations":[{"raw_affiliation_string":"IBMC - Instituto de Biologia Molecular e Celular & Universidade do Porto, Porto, Portugal","institution_ids":["https://openalex.org/I182534213"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5003291220","display_name":"Nuno A. Fonseca","orcid":"https://orcid.org/0000-0003-4832-578X"},"institutions":[{"id":"https://openalex.org/I4210166615","display_name":"INESC TEC","ror":"https://ror.org/05fa8ka61","country_code":"PT","type":"nonprofit","lineage":["https://openalex.org/I4210125590","https://openalex.org/I4210166615"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I121345201","display_name":"Instituto de Engenharia de Sistemas e Computadores Investiga\u00e7\u00e3o e Desenvolvimento","ror":"https://ror.org/04mqy3p58","country_code":"PT","type":"nonprofit","lineage":["https://openalex.org/I121345201","https://openalex.org/I4210125590"]}],"countries":["GB","PT"],"is_corresponding":false,"raw_author_name":"Nuno A. Fonseca","raw_affiliation_strings":["CRACS-INESCTEC, Porto, Portugal","EMBL Outstation, European Bioinformatics Institute (EBI), Hinxton, Cambridge, CB10 ISD, UK"],"affiliations":[{"raw_affiliation_string":"CRACS-INESCTEC, Porto, Portugal","institution_ids":["https://openalex.org/I121345201","https://openalex.org/I4210166615"]},{"raw_affiliation_string":"EMBL Outstation, European Bioinformatics Institute (EBI), Hinxton, Cambridge, CB10 ISD, UK","institution_ids":["https://openalex.org/I1303153112"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5016378511"],"corresponding_institution_ids":["https://openalex.org/I182534213"],"apc_list":null,"apc_paid":null,"fwci":0.776,"has_fulltext":false,"cited_by_count":19,"citation_normalized_percentile":{"value":0.71255363,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"85","last_page":"91"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9902999997138977,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/transposable-element","display_name":"Transposable element","score":0.744378924369812},{"id":"https://openalex.org/keywords/boosting","display_name":"Boosting (machine learning)","score":0.7048454880714417},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6507660150527954},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.6190040111541748},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5563647150993347},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.49909234046936035},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4709656536579132},{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.4588828980922699},{"id":"https://openalex.org/keywords/transpose","display_name":"Transpose","score":0.44965505599975586},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3239324986934662},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2179965376853943},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.144772469997406},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.0829954445362091}],"concepts":[{"id":"https://openalex.org/C4918238","wikidata":"https://www.wikidata.org/wiki/Q121438","display_name":"Transposable element","level":4,"score":0.744378924369812},{"id":"https://openalex.org/C46686674","wikidata":"https://www.wikidata.org/wiki/Q466303","display_name":"Boosting (machine learning)","level":2,"score":0.7048454880714417},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6507660150527954},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.6190040111541748},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5563647150993347},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.49909234046936035},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4709656536579132},{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.4588828980922699},{"id":"https://openalex.org/C200106649","wikidata":"https://www.wikidata.org/wiki/Q223683","display_name":"Transpose","level":3,"score":0.44965505599975586},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3239324986934662},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2179965376853943},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.144772469997406},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0829954445362091},{"id":"https://openalex.org/C158693339","wikidata":"https://www.wikidata.org/wiki/Q190524","display_name":"Eigenvalues and eigenvectors","level":2,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-319-00578-2_12","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-00578-2_12","pdf_url":null,"source":{"id":"https://openalex.org/S2764905038","display_name":"Advances in intelligent systems and computing","issn_l":"2194-5357","issn":["2194-5357","2194-5365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Advances in Intelligent Systems and Computing","raw_type":"book-chapter"},{"id":"pmh:oai:repositorio.inesctec.pt:123456789/7068","is_oa":true,"landing_page_url":"http://repositorio.inesctec.pt/handle/123456789/7068","pdf_url":null,"source":{"id":"https://openalex.org/S4306402433","display_name":"Portuguese National Funding Agency for Science, Research and Technology (RCAAP Project by FCT)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"journal article"}],"best_oa_location":{"id":"pmh:oai:repositorio.inesctec.pt:123456789/7068","is_oa":true,"landing_page_url":"http://repositorio.inesctec.pt/handle/123456789/7068","pdf_url":null,"source":{"id":"https://openalex.org/S4306402433","display_name":"Portuguese National Funding Agency for Science, Research and Technology (RCAAP Project by FCT)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"journal article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":20,"referenced_works":["https://openalex.org/W1570448133","https://openalex.org/W1968050693","https://openalex.org/W1975445958","https://openalex.org/W1999078569","https://openalex.org/W1999930403","https://openalex.org/W2029195137","https://openalex.org/W2033049603","https://openalex.org/W2054373621","https://openalex.org/W2069712815","https://openalex.org/W2071501400","https://openalex.org/W2082330286","https://openalex.org/W2098464924","https://openalex.org/W2113506551","https://openalex.org/W2122954888","https://openalex.org/W2123646732","https://openalex.org/W2129581281","https://openalex.org/W2136145671","https://openalex.org/W4240861547","https://openalex.org/W4409798803","https://openalex.org/W6610739832"],"related_works":["https://openalex.org/W2003786218","https://openalex.org/W4313549635","https://openalex.org/W2376104713","https://openalex.org/W2356636683","https://openalex.org/W4205331489","https://openalex.org/W4385493077","https://openalex.org/W2361861616","https://openalex.org/W2912862995","https://openalex.org/W3129816939","https://openalex.org/W1985407100"],"abstract_inverted_index":null,"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":7},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":1},{"year":2013,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
