{"id":"https://openalex.org/W4416237839","doi":"https://doi.org/10.1007/978-3-032-08452-1_26","title":"Metabolomic Predictions via SOM: A Cold-Stress Case Study in Arabidopsis thaliana","display_name":"Metabolomic Predictions via SOM: A Cold-Stress Case Study in Arabidopsis thaliana","publication_year":2025,"publication_date":"2025-11-15","ids":{"openalex":"https://openalex.org/W4416237839","doi":"https://doi.org/10.1007/978-3-032-08452-1_26"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-032-08452-1_26","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-032-08452-1_26","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5015765065","display_name":"Jana Schwarzerov\u00e1","orcid":"https://orcid.org/0000-0003-2918-9313"},"institutions":[{"id":"https://openalex.org/I129774422","display_name":"University of Vienna","ror":"https://ror.org/03prydq77","country_code":"AT","type":"education","lineage":["https://openalex.org/I129774422"]},{"id":"https://openalex.org/I187293425","display_name":"University of Ostrava","ror":"https://ror.org/00pyqav47","country_code":"CZ","type":"education","lineage":["https://openalex.org/I187293425"]},{"id":"https://openalex.org/I4210088935","display_name":"University Hospital Ostrava","ror":"https://ror.org/00a6yph09","country_code":"CZ","type":"healthcare","lineage":["https://openalex.org/I4210088935"]},{"id":"https://openalex.org/I60587646","display_name":"Brno University of Technology","ror":"https://ror.org/03613d656","country_code":"CZ","type":"education","lineage":["https://openalex.org/I60587646"]}],"countries":["AT","CZ"],"is_corresponding":false,"raw_author_name":"Jana Schwarzerova","raw_affiliation_strings":["Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Brno, Czech Republic","Department of Informatics and Computers, University of Ostrava, Ostrava, Czech Republic","Department of Molecular and Clinical Pathology and Medical Genetics, University Hospital Ostrava, Ostrava, Czech Republic","Molecular Systems Biology (MOSYS), University of Vienna, Vienna, Austria"],"raw_orcid":"https://orcid.org/0000-0003-2918-9313","affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Brno, Czech Republic","institution_ids":["https://openalex.org/I60587646"]},{"raw_affiliation_string":"Department of Informatics and Computers, University of Ostrava, Ostrava, Czech Republic","institution_ids":["https://openalex.org/I187293425"]},{"raw_affiliation_string":"Department of Molecular and Clinical Pathology and Medical Genetics, University Hospital Ostrava, Ostrava, Czech Republic","institution_ids":["https://openalex.org/I4210088935"]},{"raw_affiliation_string":"Molecular Systems Biology (MOSYS), University of Vienna, Vienna, Austria","institution_ids":["https://openalex.org/I129774422"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089446348","display_name":"Eva Voln\u00e1","orcid":"https://orcid.org/0000-0002-8453-3757"},"institutions":[{"id":"https://openalex.org/I187293425","display_name":"University of Ostrava","ror":"https://ror.org/00pyqav47","country_code":"CZ","type":"education","lineage":["https://openalex.org/I187293425"]}],"countries":["CZ"],"is_corresponding":false,"raw_author_name":"Eva Volna","raw_affiliation_strings":["Department of Informatics and Computers, University of Ostrava, Ostrava, Czech Republic"],"raw_orcid":"https://orcid.org/0000-0002-8453-3757","affiliations":[{"raw_affiliation_string":"Department of Informatics and Computers, University of Ostrava, Ostrava, Czech Republic","institution_ids":["https://openalex.org/I187293425"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038054569","display_name":"Steffen Waldherr","orcid":"https://orcid.org/0000-0002-0936-579X"},"institutions":[{"id":"https://openalex.org/I129774422","display_name":"University of Vienna","ror":"https://ror.org/03prydq77","country_code":"AT","type":"education","lineage":["https://openalex.org/I129774422"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Steffen Waldherr","raw_affiliation_strings":["Molecular Systems Biology (MOSYS), University of Vienna, Vienna, Austria"],"raw_orcid":"https://orcid.org/0000-0002-0936-579X","affiliations":[{"raw_affiliation_string":"Molecular Systems Biology (MOSYS), University of Vienna, Vienna, Austria","institution_ids":["https://openalex.org/I129774422"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053620310","display_name":"Ivo Provazn\u00edk","orcid":"https://orcid.org/0000-0002-3422-7938"},"institutions":[{"id":"https://openalex.org/I187293425","display_name":"University of Ostrava","ror":"https://ror.org/00pyqav47","country_code":"CZ","type":"education","lineage":["https://openalex.org/I187293425"]},{"id":"https://openalex.org/I44504214","display_name":"Czech Technical University in Prague","ror":"https://ror.org/03kqpb082","country_code":"CZ","type":"education","lineage":["https://openalex.org/I44504214"]},{"id":"https://openalex.org/I60587646","display_name":"Brno University of Technology","ror":"https://ror.org/03613d656","country_code":"CZ","type":"education","lineage":["https://openalex.org/I60587646"]}],"countries":["CZ"],"is_corresponding":false,"raw_author_name":"Valentyna Provaznik","raw_affiliation_strings":["Czech Institute of Informatics, Robotics and Cybernetics, Czech Technical University in Prague, Prague, Czechia","Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Brno, Czech Republic","Faculty of Medicine, University of Ostrava, Ostrava, Czech Republic"],"raw_orcid":"https://orcid.org/0000-0002-3422-7938","affiliations":[{"raw_affiliation_string":"Czech Institute of Informatics, Robotics and Cybernetics, Czech Technical University in Prague, Prague, Czechia","institution_ids":["https://openalex.org/I44504214"]},{"raw_affiliation_string":"Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Brno, Czech Republic","institution_ids":["https://openalex.org/I60587646"]},{"raw_affiliation_string":"Faculty of Medicine, University of Ostrava, Ostrava, Czech Republic","institution_ids":["https://openalex.org/I187293425"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5060741375","display_name":"Wolfram Weckwerth","orcid":"https://orcid.org/0000-0002-9719-6358"},"institutions":[{"id":"https://openalex.org/I129774422","display_name":"University of Vienna","ror":"https://ror.org/03prydq77","country_code":"AT","type":"education","lineage":["https://openalex.org/I129774422"]}],"countries":["AT"],"is_corresponding":true,"raw_author_name":"Wolfram Weckwerth","raw_affiliation_strings":["Molecular Systems Biology (MOSYS), University of Vienna, Vienna, Austria","Vienna Metabolomics Center (VIME), University of Vienna, Vienna, Austria"],"raw_orcid":"https://orcid.org/0000-0002-9719-6358","affiliations":[{"raw_affiliation_string":"Molecular Systems Biology (MOSYS), University of Vienna, Vienna, Austria","institution_ids":["https://openalex.org/I129774422"]},{"raw_affiliation_string":"Vienna Metabolomics Center (VIME), University of Vienna, Vienna, Austria","institution_ids":["https://openalex.org/I129774422"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5060741375"],"corresponding_institution_ids":["https://openalex.org/I129774422"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"322","last_page":"333"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.14350000023841858,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.14350000023841858,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10014","display_name":"Plant Stress Responses and Tolerance","score":0.13210000097751617,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12813","display_name":"Plant and Biological Electrophysiology Studies","score":0.07649999856948853,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metabolomics","display_name":"Metabolomics","score":0.9120000004768372},{"id":"https://openalex.org/keywords/arabidopsis-thaliana","display_name":"Arabidopsis thaliana","score":0.840499997138977},{"id":"https://openalex.org/keywords/ecotype","display_name":"Ecotype","score":0.7002000212669373},{"id":"https://openalex.org/keywords/arabidopsis","display_name":"Arabidopsis","score":0.5235999822616577},{"id":"https://openalex.org/keywords/metabolite","display_name":"Metabolite","score":0.4771000146865845},{"id":"https://openalex.org/keywords/cold-stress","display_name":"Cold stress","score":0.4413999915122986},{"id":"https://openalex.org/keywords/resilience","display_name":"Resilience (materials science)","score":0.34130001068115234},{"id":"https://openalex.org/keywords/heat-stress","display_name":"Heat stress","score":0.33739998936653137}],"concepts":[{"id":"https://openalex.org/C21565614","wikidata":"https://www.wikidata.org/wiki/Q12149006","display_name":"Metabolomics","level":2,"score":0.9120000004768372},{"id":"https://openalex.org/C2775988993","wikidata":"https://www.wikidata.org/wiki/Q158695","display_name":"Arabidopsis thaliana","level":4,"score":0.840499997138977},{"id":"https://openalex.org/C10860467","wikidata":"https://www.wikidata.org/wiki/Q296519","display_name":"Ecotype","level":2,"score":0.7002000212669373},{"id":"https://openalex.org/C2779491563","wikidata":"https://www.wikidata.org/wiki/Q157892","display_name":"Arabidopsis","level":4,"score":0.5235999822616577},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5157999992370605},{"id":"https://openalex.org/C2777477808","wikidata":"https://www.wikidata.org/wiki/Q407595","display_name":"Metabolite","level":2,"score":0.4771000146865845},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4453999996185303},{"id":"https://openalex.org/C2992529232","wikidata":"https://www.wikidata.org/wiki/Q1036696","display_name":"Cold stress","level":3,"score":0.4413999915122986},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.43320000171661377},{"id":"https://openalex.org/C2779585090","wikidata":"https://www.wikidata.org/wiki/Q3457762","display_name":"Resilience (materials science)","level":2,"score":0.34130001068115234},{"id":"https://openalex.org/C2987418964","wikidata":"https://www.wikidata.org/wiki/Q242165","display_name":"Heat stress","level":2,"score":0.33739998936653137},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.32899999618530273},{"id":"https://openalex.org/C78604142","wikidata":"https://www.wikidata.org/wiki/Q1640582","display_name":"Fight-or-flight response","level":3,"score":0.32190001010894775},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.3181000053882599},{"id":"https://openalex.org/C2982966219","wikidata":"https://www.wikidata.org/wiki/Q3045481","display_name":"Plant growth","level":2,"score":0.3158000111579895},{"id":"https://openalex.org/C2992278830","wikidata":"https://www.wikidata.org/wiki/Q483921","display_name":"Adaptive evolution","level":3,"score":0.31119999289512634},{"id":"https://openalex.org/C2992468275","wikidata":"https://www.wikidata.org/wiki/Q12142810","display_name":"Drought stress","level":2,"score":0.2913999855518341},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.288100004196167},{"id":"https://openalex.org/C2986039202","wikidata":"https://www.wikidata.org/wiki/Q123414","display_name":"Environmental stress","level":2,"score":0.28679999709129333},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.2800000011920929},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.27720001339912415},{"id":"https://openalex.org/C3019719930","wikidata":"https://www.wikidata.org/wiki/Q3910099","display_name":"Predictive value","level":2,"score":0.274399995803833},{"id":"https://openalex.org/C137176749","wikidata":"https://www.wikidata.org/wiki/Q4105337","display_name":"Psychological resilience","level":2,"score":0.2728999853134155},{"id":"https://openalex.org/C21036866","wikidata":"https://www.wikidata.org/wiki/Q181767","display_name":"Stress (linguistics)","level":2,"score":0.2639000117778778},{"id":"https://openalex.org/C2994400308","wikidata":"https://www.wikidata.org/wiki/Q12149006","display_name":"Metabolite profiling","level":3,"score":0.2599000036716461}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-032-08452-1_26","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-032-08452-1_26","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":16,"referenced_works":["https://openalex.org/W2046177461","https://openalex.org/W2171209182","https://openalex.org/W2982398169","https://openalex.org/W4213332169","https://openalex.org/W4288686294","https://openalex.org/W4306403480","https://openalex.org/W4312233856","https://openalex.org/W4377693579","https://openalex.org/W4382394603","https://openalex.org/W4389819279","https://openalex.org/W4390111637","https://openalex.org/W4402723049","https://openalex.org/W4404012579","https://openalex.org/W4406363137","https://openalex.org/W4406363344","https://openalex.org/W4409155278"],"related_works":[],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-11-15T00:00:00"}
