{"id":"https://openalex.org/W4411811379","doi":"https://doi.org/10.1007/978-3-031-97141-9_6","title":"How Important is Domain-Specific Language Model Pretraining and\u00a0Instruction Finetuning for\u00a0Biomedical Relation Extraction?","display_name":"How Important is Domain-Specific Language Model Pretraining and\u00a0Instruction Finetuning for\u00a0Biomedical Relation Extraction?","publication_year":2025,"publication_date":"2025-06-30","ids":{"openalex":"https://openalex.org/W4411811379","doi":"https://doi.org/10.1007/978-3-031-97141-9_6","pmid":"https://pubmed.ncbi.nlm.nih.gov/40843288"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-031-97141-9_6","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-97141-9_6","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5093984489","display_name":"Aviv Brokman","orcid":null},"institutions":[{"id":"https://openalex.org/I143302722","display_name":"University of Kentucky","ror":"https://ror.org/02k3smh20","country_code":"US","type":"education","lineage":["https://openalex.org/I143302722"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Aviv Brokman","raw_affiliation_strings":["Department of Statistics, University of Kentucky, USA"],"affiliations":[{"raw_affiliation_string":"Department of Statistics, University of Kentucky, USA","institution_ids":["https://openalex.org/I143302722"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5020481922","display_name":"Ramakanth Kavuluru","orcid":"https://orcid.org/0000-0003-1238-9378"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ramakanth Kavuluru","raw_affiliation_strings":["Division of Biomedical Informatics, University of Kentucky, USA"],"affiliations":[{"raw_affiliation_string":"Division of Biomedical Informatics, University of Kentucky, USA","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5093984489"],"corresponding_institution_ids":["https://openalex.org/I143302722"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":4.9119,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.94073292,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":99},"biblio":{"volume":"15836","issue":null,"first_page":"80","last_page":"94"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8734811544418335},{"id":"https://openalex.org/keywords/relation","display_name":"Relation (database)","score":0.6039689779281616},{"id":"https://openalex.org/keywords/relationship-extraction","display_name":"Relationship extraction","score":0.5647512078285217},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.5614545345306396},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3835305869579315},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.32976025342941284},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.1584351360797882},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.04303482174873352}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8734811544418335},{"id":"https://openalex.org/C25343380","wikidata":"https://www.wikidata.org/wiki/Q277521","display_name":"Relation (database)","level":2,"score":0.6039689779281616},{"id":"https://openalex.org/C153604712","wikidata":"https://www.wikidata.org/wiki/Q7310755","display_name":"Relationship extraction","level":3,"score":0.5647512078285217},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.5614545345306396},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3835305869579315},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.32976025342941284},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.1584351360797882},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.04303482174873352},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/978-3-031-97141-9_6","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-97141-9_6","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmid:40843288","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40843288","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Natural language processing and information systems : ... International Conference on Applications of Natural Language to Information Systems, NLDB ... revised papers. International Conference on Applications of Natural Language to Info...","raw_type":null},{"id":"pmh:oai:europepmc.org:11179805","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12367199","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.4699999988079071,"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":41,"referenced_works":["https://openalex.org/W2170189740","https://openalex.org/W2183538607","https://openalex.org/W2251091211","https://openalex.org/W2346452181","https://openalex.org/W2396881363","https://openalex.org/W2756665674","https://openalex.org/W2798734500","https://openalex.org/W2802532163","https://openalex.org/W2910326837","https://openalex.org/W2911489562","https://openalex.org/W2963716420","https://openalex.org/W2971258845","https://openalex.org/W2981852735","https://openalex.org/W2996825178","https://openalex.org/W3015453090","https://openalex.org/W3034238904","https://openalex.org/W3034999214","https://openalex.org/W3046375318","https://openalex.org/W3100452049","https://openalex.org/W3104578551","https://openalex.org/W3153427360","https://openalex.org/W3166508187","https://openalex.org/W3167136668","https://openalex.org/W3176900753","https://openalex.org/W3202242582","https://openalex.org/W3212496002","https://openalex.org/W3214342214","https://openalex.org/W4223491992","https://openalex.org/W4223492536","https://openalex.org/W4226278401","https://openalex.org/W4287854707","https://openalex.org/W4287887247","https://openalex.org/W4287890934","https://openalex.org/W4297253404","https://openalex.org/W4385571451","https://openalex.org/W4385572634","https://openalex.org/W4389543757","https://openalex.org/W6600424091","https://openalex.org/W6778883912","https://openalex.org/W6782465632","https://openalex.org/W6800875267"],"related_works":["https://openalex.org/W2976808399","https://openalex.org/W2609844752","https://openalex.org/W4392969631","https://openalex.org/W4285246823","https://openalex.org/W4226278302","https://openalex.org/W4221160509","https://openalex.org/W2547211086","https://openalex.org/W2538200646","https://openalex.org/W1968988659","https://openalex.org/W2888033806"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
