{"id":"https://openalex.org/W4410287724","doi":"https://doi.org/10.1007/978-3-031-90714-2_18","title":"Pre-trained Models Based on\u00a0Primary Sequence to\u00a0Classify Antibody Binding to\u00a0Protein and\u00a0Non-protein Targets with\u00a080% Accuracy","display_name":"Pre-trained Models Based on\u00a0Primary Sequence to\u00a0Classify Antibody Binding to\u00a0Protein and\u00a0Non-protein Targets with\u00a080% Accuracy","publication_year":2025,"publication_date":"2025-01-01","ids":{"openalex":"https://openalex.org/W4410287724","doi":"https://doi.org/10.1007/978-3-031-90714-2_18"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-031-90714-2_18","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-90714-2_18","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5053987889","display_name":"Sara Joubbi","orcid":"https://orcid.org/0009-0002-1079-7204"},"institutions":[{"id":"https://openalex.org/I108290504","display_name":"University of Pisa","ror":"https://ror.org/03ad39j10","country_code":"IT","type":"education","lineage":["https://openalex.org/I108290504"]},{"id":"https://openalex.org/I4210121412","display_name":"Toscana Life Sciences","ror":"https://ror.org/01xze8742","country_code":"IT","type":"nonprofit","lineage":["https://openalex.org/I4210121412"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Sara Joubbi","raw_affiliation_strings":["Data Science for Health Lab, Toscana Life Sciences Foundation, Siena, Italy","Department of Computer Science, University of Pisa, Pisa, Italy"],"raw_orcid":"https://orcid.org/0009-0002-1079-7204","affiliations":[{"raw_affiliation_string":"Data Science for Health Lab, Toscana Life Sciences Foundation, Siena, Italy","institution_ids":["https://openalex.org/I4210121412"]},{"raw_affiliation_string":"Department of Computer Science, University of Pisa, Pisa, Italy","institution_ids":["https://openalex.org/I108290504"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069198387","display_name":"Giuseppe Maccari","orcid":"https://orcid.org/0000-0002-2894-3583"},"institutions":[{"id":"https://openalex.org/I4210121412","display_name":"Toscana Life Sciences","ror":"https://ror.org/01xze8742","country_code":"IT","type":"nonprofit","lineage":["https://openalex.org/I4210121412"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Giuseppe Maccari","raw_affiliation_strings":["Data Science for Health Lab, Toscana Life Sciences Foundation, Siena, Italy"],"raw_orcid":"https://orcid.org/0000-0002-2894-3583","affiliations":[{"raw_affiliation_string":"Data Science for Health Lab, Toscana Life Sciences Foundation, Siena, Italy","institution_ids":["https://openalex.org/I4210121412"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090505273","display_name":"Dario Cardamone","orcid":"https://orcid.org/0000-0002-4006-5277"},"institutions":[{"id":"https://openalex.org/I4210121412","display_name":"Toscana Life Sciences","ror":"https://ror.org/01xze8742","country_code":"IT","type":"nonprofit","lineage":["https://openalex.org/I4210121412"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Dario Cardamone","raw_affiliation_strings":["Data Science for Health Lab, Toscana Life Sciences Foundation, Siena, Italy"],"raw_orcid":"https://orcid.org/0000-0002-4006-5277","affiliations":[{"raw_affiliation_string":"Data Science for Health Lab, Toscana Life Sciences Foundation, Siena, Italy","institution_ids":["https://openalex.org/I4210121412"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065846066","display_name":"Giorgio Ciano","orcid":"https://orcid.org/0000-0003-2863-4315"},"institutions":[{"id":"https://openalex.org/I4210121412","display_name":"Toscana Life Sciences","ror":"https://ror.org/01xze8742","country_code":"IT","type":"nonprofit","lineage":["https://openalex.org/I4210121412"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Giorgio Ciano","raw_affiliation_strings":["Data Science for Health Lab, Toscana Life Sciences Foundation, Siena, Italy"],"raw_orcid":"https://orcid.org/0000-0003-2863-4315","affiliations":[{"raw_affiliation_string":"Data Science for Health Lab, Toscana Life Sciences Foundation, Siena, Italy","institution_ids":["https://openalex.org/I4210121412"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010923663","display_name":"Alessio Micheli","orcid":"https://orcid.org/0000-0001-5764-5238"},"institutions":[{"id":"https://openalex.org/I108290504","display_name":"University of Pisa","ror":"https://ror.org/03ad39j10","country_code":"IT","type":"education","lineage":["https://openalex.org/I108290504"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Alessio Micheli","raw_affiliation_strings":["Department of Computer Science, University of Pisa, Pisa, Italy"],"raw_orcid":"https://orcid.org/0000-0001-5764-5238","affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Pisa, Pisa, Italy","institution_ids":["https://openalex.org/I108290504"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038730637","display_name":"Paolo Milazzo","orcid":"https://orcid.org/0000-0002-7309-6424"},"institutions":[{"id":"https://openalex.org/I108290504","display_name":"University of Pisa","ror":"https://ror.org/03ad39j10","country_code":"IT","type":"education","lineage":["https://openalex.org/I108290504"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Paolo Milazzo","raw_affiliation_strings":["Department of Computer Science, University of Pisa, Pisa, Italy"],"raw_orcid":"https://orcid.org/0000-0002-7309-6424","affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Pisa, Pisa, Italy","institution_ids":["https://openalex.org/I108290504"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5079660157","display_name":"Duccio Medini","orcid":"https://orcid.org/0000-0001-6041-2603"},"institutions":[{"id":"https://openalex.org/I4210121412","display_name":"Toscana Life Sciences","ror":"https://ror.org/01xze8742","country_code":"IT","type":"nonprofit","lineage":["https://openalex.org/I4210121412"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Duccio Medini","raw_affiliation_strings":["Data Science for Health Lab, Toscana Life Sciences Foundation, Siena, Italy"],"raw_orcid":"https://orcid.org/0000-0001-6041-2603","affiliations":[{"raw_affiliation_string":"Data Science for Health Lab, Toscana Life Sciences Foundation, Siena, Italy","institution_ids":["https://openalex.org/I4210121412"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5053987889"],"corresponding_institution_ids":["https://openalex.org/I108290504","https://openalex.org/I4210121412"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.18003947,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"237","last_page":"254"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11016","display_name":"Monoclonal and Polyclonal Antibodies Research","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7294004559516907},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5521636009216309},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5481935739517212},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.5143147706985474},{"id":"https://openalex.org/keywords/protein-sequencing","display_name":"Protein sequencing","score":0.4711571931838989},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.1753617525100708},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.0817766785621643},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.07727962732315063}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7294004559516907},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5521636009216309},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5481935739517212},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.5143147706985474},{"id":"https://openalex.org/C10010492","wikidata":"https://www.wikidata.org/wiki/Q3142557","display_name":"Protein sequencing","level":4,"score":0.4711571931838989},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.1753617525100708},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0817766785621643},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.07727962732315063},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-031-90714-2_18","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-90714-2_18","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:arpi.unipi.it:11568/1313447","is_oa":false,"landing_page_url":"https://hdl.handle.net/11568/1313447","pdf_url":null,"source":{"id":"https://openalex.org/S4377196265","display_name":"CINECA IRIS Institutial research information system (University of Pisa)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I108290504","host_organization_name":"University of Pisa","host_organization_lineage":["https://openalex.org/I108290504"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/conferenceObject"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","score":0.5899999737739563,"display_name":"Zero hunger"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":23,"referenced_works":["https://openalex.org/W1943870977","https://openalex.org/W2110505462","https://openalex.org/W2148143831","https://openalex.org/W2323929490","https://openalex.org/W2578029714","https://openalex.org/W2903041116","https://openalex.org/W2913058153","https://openalex.org/W2950118240","https://openalex.org/W2980681402","https://openalex.org/W2997109716","https://openalex.org/W3177500196","https://openalex.org/W3216580380","https://openalex.org/W4226323522","https://openalex.org/W4283465605","https://openalex.org/W4295312788","https://openalex.org/W4307166035","https://openalex.org/W4308683080","https://openalex.org/W4310875677","https://openalex.org/W4321214126","https://openalex.org/W4323928803","https://openalex.org/W4396241057","https://openalex.org/W4400344126","https://openalex.org/W4405104445"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2033914206","https://openalex.org/W2042327336","https://openalex.org/W2095784700"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-06-13T06:13:01.061226","created_date":"2025-10-10T00:00:00"}
