{"id":"https://openalex.org/W4409739468","doi":"https://doi.org/10.1007/978-3-031-90252-9_36","title":"Integration and\u00a0Querying of\u00a0Multimodal Single-Cell Data with\u00a0PoE-VAE","display_name":"Integration and\u00a0Querying of\u00a0Multimodal Single-Cell Data with\u00a0PoE-VAE","publication_year":2025,"publication_date":"2025-01-01","ids":{"openalex":"https://openalex.org/W4409739468","doi":"https://doi.org/10.1007/978-3-031-90252-9_36"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-031-90252-9_36","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-90252-9_36","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5045299642","display_name":"Anastasia Litinetskaya","orcid":"https://orcid.org/0000-0003-2977-6374"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]},{"id":"https://openalex.org/I3018134672","display_name":"Helmholtz Zentrum M\u00fcnchen","ror":"https://ror.org/00cfam450","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Anastasia Litinetskaya","raw_affiliation_strings":["Institute of Computational Biology, Helmholtz Center Munich, Munich, Germany","School of Computing, Information and Technology, Technical University of Munich, Munich, Germany"],"affiliations":[{"raw_affiliation_string":"Institute of Computational Biology, Helmholtz Center Munich, Munich, Germany","institution_ids":["https://openalex.org/I3018134672"]},{"raw_affiliation_string":"School of Computing, Information and Technology, Technical University of Munich, Munich, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033126809","display_name":"Maiia Shulman","orcid":"https://orcid.org/0009-0006-6308-1997"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]},{"id":"https://openalex.org/I3018134672","display_name":"Helmholtz Zentrum M\u00fcnchen","ror":"https://ror.org/00cfam450","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Maiia Schulman","raw_affiliation_strings":["Institute of Computational Biology, Helmholtz Center Munich, Munich, Germany","School of Life Sciences Weihenstephan, Technical University of Munich, Munich, Germany"],"affiliations":[{"raw_affiliation_string":"Institute of Computational Biology, Helmholtz Center Munich, Munich, Germany","institution_ids":["https://openalex.org/I3018134672"]},{"raw_affiliation_string":"School of Life Sciences Weihenstephan, Technical University of Munich, Munich, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006317534","display_name":"Fabiola Curion","orcid":"https://orcid.org/0000-0003-2502-8803"},"institutions":[{"id":"https://openalex.org/I3018134672","display_name":"Helmholtz Zentrum M\u00fcnchen","ror":"https://ror.org/00cfam450","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672"]},{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Fabiola Curion","raw_affiliation_strings":["Institute of Computational Biology, Helmholtz Center Munich, Munich, Germany","School of Computing, Information and Technology, Technical University of Munich, Munich, Germany"],"affiliations":[{"raw_affiliation_string":"Institute of Computational Biology, Helmholtz Center Munich, Munich, Germany","institution_ids":["https://openalex.org/I3018134672"]},{"raw_affiliation_string":"School of Computing, Information and Technology, Technical University of Munich, Munich, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060683671","display_name":"Artur Sza\u0142ata","orcid":"https://orcid.org/0000-0001-8413-234X"},"institutions":[{"id":"https://openalex.org/I3018134672","display_name":"Helmholtz Zentrum M\u00fcnchen","ror":"https://ror.org/00cfam450","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672"]},{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Artur Szalata","raw_affiliation_strings":["Institute of Computational Biology, Helmholtz Center Munich, Munich, Germany","School of Computing, Information and Technology, Technical University of Munich, Munich, Germany"],"affiliations":[{"raw_affiliation_string":"Institute of Computational Biology, Helmholtz Center Munich, Munich, Germany","institution_ids":["https://openalex.org/I3018134672"]},{"raw_affiliation_string":"School of Computing, Information and Technology, Technical University of Munich, Munich, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5105965148","display_name":"Alireza Omidi","orcid":"https://orcid.org/0000-0003-3598-9480"},"institutions":[{"id":"https://openalex.org/I4210133112","display_name":"Canada's Michael Smith Genome Sciences Centre","ror":"https://ror.org/0333j0897","country_code":"CA","type":"other","lineage":["https://openalex.org/I4210133112"]},{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Alireza Omidi","raw_affiliation_strings":["Michael Smith Laboratories, University of British Columbia, Vancouver, Canada"],"affiliations":[{"raw_affiliation_string":"Michael Smith Laboratories, University of British Columbia, Vancouver, Canada","institution_ids":["https://openalex.org/I4210133112","https://openalex.org/I141945490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077814625","display_name":"Mohammad Lotfollahi","orcid":"https://orcid.org/0000-0001-6858-7985"},"institutions":[{"id":"https://openalex.org/I21196054","display_name":"Wellcome/MRC Cambridge Stem Cell Institute","ror":"https://ror.org/05nz0zp31","country_code":"GB","type":"facility","lineage":["https://openalex.org/I21196054","https://openalex.org/I241749","https://openalex.org/I4210087105","https://openalex.org/I87048295","https://openalex.org/I90344618"]},{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]},{"id":"https://openalex.org/I3018134672","display_name":"Helmholtz Zentrum M\u00fcnchen","ror":"https://ror.org/00cfam450","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672"]},{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]}],"countries":["DE","GB"],"is_corresponding":false,"raw_author_name":"Mohammad Lotfollahi","raw_affiliation_strings":["Institute of Computational Biology, Helmholtz Center Munich, Munich, Germany","Wellcome Sanger Institute, Cambridge, UK","Wellcome-MRC Cambridge Stem Cell Institute, University of Cambridge, Cambridge, UK"],"affiliations":[{"raw_affiliation_string":"Institute of Computational Biology, Helmholtz Center Munich, Munich, Germany","institution_ids":["https://openalex.org/I3018134672"]},{"raw_affiliation_string":"Wellcome Sanger Institute, Cambridge, UK","institution_ids":["https://openalex.org/I2802476451"]},{"raw_affiliation_string":"Wellcome-MRC Cambridge Stem Cell Institute, University of Cambridge, Cambridge, UK","institution_ids":["https://openalex.org/I21196054","https://openalex.org/I241749"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5083128670","display_name":"Fabian J. Theis","orcid":"https://orcid.org/0000-0002-2419-1943"},"institutions":[{"id":"https://openalex.org/I3018134672","display_name":"Helmholtz Zentrum M\u00fcnchen","ror":"https://ror.org/00cfam450","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672"]},{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]},{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE","GB"],"is_corresponding":false,"raw_author_name":"Fabian Theis","raw_affiliation_strings":["Institute of Computational Biology, Helmholtz Center Munich, Munich, Germany","School of Computing, Information and Technology, Technical University of Munich, Munich, Germany","School of Life Sciences Weihenstephan, Technical University of Munich, Munich, Germany","Wellcome Sanger Institute, Cambridge, UK"],"affiliations":[{"raw_affiliation_string":"Institute of Computational Biology, Helmholtz Center Munich, Munich, Germany","institution_ids":["https://openalex.org/I3018134672"]},{"raw_affiliation_string":"School of Computing, Information and Technology, Technical University of Munich, Munich, Germany","institution_ids":["https://openalex.org/I62916508"]},{"raw_affiliation_string":"School of Life Sciences Weihenstephan, Technical University of Munich, Munich, Germany","institution_ids":["https://openalex.org/I62916508"]},{"raw_affiliation_string":"Wellcome Sanger Institute, Cambridge, UK","institution_ids":["https://openalex.org/I2802476451"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5045299642"],"corresponding_institution_ids":["https://openalex.org/I3018134672","https://openalex.org/I62916508"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":13.3388,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.98102649,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"345","last_page":"348"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9053000211715698,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.904699981212616,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8797849416732788},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3221491575241089}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8797849416732788},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3221491575241089}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-031-90252-9_36","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-90252-9_36","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":11,"referenced_works":["https://openalex.org/W3027051073","https://openalex.org/W3129866267","https://openalex.org/W3164692211","https://openalex.org/W3203263776","https://openalex.org/W4225278475","https://openalex.org/W4225535314","https://openalex.org/W4225598893","https://openalex.org/W4317884487","https://openalex.org/W4379521442","https://openalex.org/W4382632237","https://openalex.org/W4386415960"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
