{"id":"https://openalex.org/W4409739443","doi":"https://doi.org/10.1007/978-3-031-90252-9_1","title":"Orientation-Aware Networks for\u00a0Protein Structure Representation Learning","display_name":"Orientation-Aware Networks for\u00a0Protein Structure Representation Learning","publication_year":2025,"publication_date":"2025-01-01","ids":{"openalex":"https://openalex.org/W4409739443","doi":"https://doi.org/10.1007/978-3-031-90252-9_1"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-031-90252-9_1","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-90252-9_1","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5103001404","display_name":"Jiahan Li","orcid":"https://orcid.org/0000-0003-2541-5280"},"institutions":[{"id":"https://openalex.org/I99065089","display_name":"Tsinghua University","ror":"https://ror.org/03cve4549","country_code":"CN","type":"education","lineage":["https://openalex.org/I99065089"]},{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jiahan Li","raw_affiliation_strings":["Peking University, Beijing, China","Tsinghua University, Beijing, China"],"affiliations":[{"raw_affiliation_string":"Peking University, Beijing, China","institution_ids":["https://openalex.org/I20231570"]},{"raw_affiliation_string":"Tsinghua University, Beijing, China","institution_ids":["https://openalex.org/I99065089"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064112226","display_name":"Shitong Luo","orcid":"https://orcid.org/0000-0003-3655-2301"},"institutions":[{"id":"https://openalex.org/I63966007","display_name":"Massachusetts Institute of Technology","ror":"https://ror.org/042nb2s44","country_code":"US","type":"education","lineage":["https://openalex.org/I63966007"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shitong Luo","raw_affiliation_strings":["Massachusetts Institute of Technology, Cambridge, USA"],"affiliations":[{"raw_affiliation_string":"Massachusetts Institute of Technology, Cambridge, USA","institution_ids":["https://openalex.org/I63966007"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050560702","display_name":"Congyue Deng","orcid":"https://orcid.org/0000-0002-0177-218X"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Congyue Deng","raw_affiliation_strings":["Stanford University, Stanford, USA"],"affiliations":[{"raw_affiliation_string":"Stanford University, Stanford, USA","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083138387","display_name":"Chaoran Cheng","orcid":"https://orcid.org/0000-0001-8128-5260"},"institutions":[{"id":"https://openalex.org/I157725225","display_name":"University of Illinois Urbana-Champaign","ror":"https://ror.org/047426m28","country_code":"US","type":"education","lineage":["https://openalex.org/I157725225"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chaoran Cheng","raw_affiliation_strings":["University of Illinois Urbana-Champaign, Champaign, USA"],"affiliations":[{"raw_affiliation_string":"University of Illinois Urbana-Champaign, Champaign, USA","institution_ids":["https://openalex.org/I157725225"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102329823","display_name":"Jiaqi Guan","orcid":"https://orcid.org/0000-0002-4515-0198"},"institutions":[{"id":"https://openalex.org/I157725225","display_name":"University of Illinois Urbana-Champaign","ror":"https://ror.org/047426m28","country_code":"US","type":"education","lineage":["https://openalex.org/I157725225"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jiaqi Guan","raw_affiliation_strings":["University of Illinois Urbana-Champaign, Champaign, USA"],"affiliations":[{"raw_affiliation_string":"University of Illinois Urbana-Champaign, Champaign, USA","institution_ids":["https://openalex.org/I157725225"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065368881","display_name":"Leonidas Guibas","orcid":"https://orcid.org/0000-0002-8315-4886"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Leonidas Guibas","raw_affiliation_strings":["Stanford University, Stanford, USA"],"affiliations":[{"raw_affiliation_string":"Stanford University, Stanford, USA","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101545679","display_name":"Jian Peng","orcid":"https://orcid.org/0000-0003-4269-4189"},"institutions":[{"id":"https://openalex.org/I4210163239","display_name":"Helix (United States)","ror":"https://ror.org/056jgxp12","country_code":"US","type":"company","lineage":["https://openalex.org/I4210163239"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jian Peng","raw_affiliation_strings":["Helixon Inc., Beijing, China"],"affiliations":[{"raw_affiliation_string":"Helixon Inc., Beijing, China","institution_ids":["https://openalex.org/I4210163239"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5074269040","display_name":"Jianzhu Ma","orcid":"https://orcid.org/0000-0002-8236-6609"},"institutions":[{"id":"https://openalex.org/I4210163239","display_name":"Helix (United States)","ror":"https://ror.org/056jgxp12","country_code":"US","type":"company","lineage":["https://openalex.org/I4210163239"]},{"id":"https://openalex.org/I99065089","display_name":"Tsinghua University","ror":"https://ror.org/03cve4549","country_code":"CN","type":"education","lineage":["https://openalex.org/I99065089"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Jianzhu Ma","raw_affiliation_strings":["Helixon Inc., Beijing, China","Tsinghua University, Beijing, China"],"affiliations":[{"raw_affiliation_string":"Helixon Inc., Beijing, China","institution_ids":["https://openalex.org/I4210163239"]},{"raw_affiliation_string":"Tsinghua University, Beijing, China","institution_ids":["https://openalex.org/I99065089"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5103001404"],"corresponding_institution_ids":["https://openalex.org/I20231570","https://openalex.org/I99065089"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.16228032,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"16"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.993399977684021,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.98580002784729,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8273676633834839},{"id":"https://openalex.org/keywords/orientation","display_name":"Orientation (vector space)","score":0.654908299446106},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.5917916297912598},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5131776928901672},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3574948012828827},{"id":"https://openalex.org/keywords/geometry","display_name":"Geometry","score":0.10705649852752686},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.06175228953361511}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8273676633834839},{"id":"https://openalex.org/C16345878","wikidata":"https://www.wikidata.org/wiki/Q107472979","display_name":"Orientation (vector space)","level":2,"score":0.654908299446106},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.5917916297912598},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5131776928901672},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3574948012828827},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.10705649852752686},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.06175228953361511},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-031-90252-9_1","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-90252-9_1","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":37,"referenced_works":["https://openalex.org/W1548178570","https://openalex.org/W1896254721","https://openalex.org/W1954297438","https://openalex.org/W1980965960","https://openalex.org/W1981264193","https://openalex.org/W1983364832","https://openalex.org/W2020530495","https://openalex.org/W2021954541","https://openalex.org/W2058373514","https://openalex.org/W2062123114","https://openalex.org/W2108067237","https://openalex.org/W2109801072","https://openalex.org/W2110483430","https://openalex.org/W2117451312","https://openalex.org/W2534288757","https://openalex.org/W2594725344","https://openalex.org/W2606439133","https://openalex.org/W2625768267","https://openalex.org/W2784883284","https://openalex.org/W2790952361","https://openalex.org/W2905812122","https://openalex.org/W2951690294","https://openalex.org/W2953524386","https://openalex.org/W2992752586","https://openalex.org/W2996986155","https://openalex.org/W3005407385","https://openalex.org/W3010339412","https://openalex.org/W3088578860","https://openalex.org/W3116323439","https://openalex.org/W3121781769","https://openalex.org/W3158545781","https://openalex.org/W3164046276","https://openalex.org/W3177828909","https://openalex.org/W3186179742","https://openalex.org/W3186243460","https://openalex.org/W6739901393","https://openalex.org/W6786423766"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}