{"id":"https://openalex.org/W4410372307","doi":"https://doi.org/10.1007/978-3-031-89704-7_14","title":"Gene Set Optimization for\u00a0Single Cell Transcriptomics","display_name":"Gene Set Optimization for\u00a0Single Cell Transcriptomics","publication_year":2025,"publication_date":"2025-01-01","ids":{"openalex":"https://openalex.org/W4410372307","doi":"https://doi.org/10.1007/978-3-031-89704-7_14","pmid":"https://pubmed.ncbi.nlm.nih.gov/40487192"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-031-89704-7_14","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-89704-7_14","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12145512/pdf/nihms-2083812.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5080933903","display_name":"H. Robert Frost","orcid":"https://orcid.org/0000-0002-6794-9945"},"institutions":[{"id":"https://openalex.org/I107672454","display_name":"Dartmouth College","ror":"https://ror.org/049s0rh22","country_code":"US","type":"education","lineage":["https://openalex.org/I107672454"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"H. Robert Frost","raw_affiliation_strings":["Dartmouth College, Hanover NH 03755, USA"],"raw_orcid":"https://orcid.org/0000-0002-6794-9945","affiliations":[{"raw_affiliation_string":"Dartmouth College, Hanover NH 03755, USA","institution_ids":["https://openalex.org/I107672454"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5080933903"],"corresponding_institution_ids":["https://openalex.org/I107672454"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.19315318,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"15276","issue":null,"first_page":"183","last_page":"195"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.987500011920929,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9854000210762024,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7812919616699219},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.637785017490387},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3375762104988098},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.12965625524520874}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7812919616699219},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.637785017490387},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3375762104988098},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.12965625524520874}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/978-3-031-89704-7_14","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-89704-7_14","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmid:40487192","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40487192","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational intelligence methods for bioinformatics and biostatistics : ... international meeting, CIBB ... : revised selected papers. CIBB (Meeting)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:12145512","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12145512","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12145512/pdf/nihms-2083812.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Comput Intell Methods Bioinform Biostat","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:12145512","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12145512","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12145512/pdf/nihms-2083812.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Comput Intell Methods Bioinform Biostat","raw_type":"Text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2463959761","display_name":null,"funder_award_id":"R35GM146586","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7222156670","display_name":null,"funder_award_id":"P30CA023108","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7697078921","display_name":null,"funder_award_id":"R21CA253408","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4410372307.pdf"},"referenced_works_count":30,"referenced_works":["https://openalex.org/W1567333450","https://openalex.org/W2010348162","https://openalex.org/W2010457001","https://openalex.org/W2012034410","https://openalex.org/W2021129827","https://openalex.org/W2095900642","https://openalex.org/W2100980426","https://openalex.org/W2102212449","https://openalex.org/W2118258530","https://openalex.org/W2127053639","https://openalex.org/W2130410032","https://openalex.org/W2134736660","https://openalex.org/W2146512944","https://openalex.org/W2338756998","https://openalex.org/W2339449699","https://openalex.org/W2361797231","https://openalex.org/W2582033455","https://openalex.org/W2612519453","https://openalex.org/W2612758576","https://openalex.org/W2613629789","https://openalex.org/W2766380147","https://openalex.org/W2766959028","https://openalex.org/W2796292443","https://openalex.org/W2951158909","https://openalex.org/W2982521190","https://openalex.org/W3020212197","https://openalex.org/W3041112668","https://openalex.org/W4213108508","https://openalex.org/W4362521490","https://openalex.org/W4396214428"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
