{"id":"https://openalex.org/W4404445567","doi":"https://doi.org/10.1007/978-3-031-76604-6_12","title":"Gene Regulatory Network for\u00a0the\u00a0Tryptophanase Operon Under the\u00a0Threshold Boolean Network Model","display_name":"Gene Regulatory Network for\u00a0the\u00a0Tryptophanase Operon Under the\u00a0Threshold Boolean Network Model","publication_year":2024,"publication_date":"2024-11-16","ids":{"openalex":"https://openalex.org/W4404445567","doi":"https://doi.org/10.1007/978-3-031-76604-6_12"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-031-76604-6_12","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-76604-6_12","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5114672191","display_name":"Felipe Encina-Chacana","orcid":null},"institutions":[{"id":"https://openalex.org/I21067949","display_name":"Adolfo Ib\u00e1\u00f1ez University","ror":"https://ror.org/0326knt82","country_code":"CL","type":"education","lineage":["https://openalex.org/I21067949"]}],"countries":["CL"],"is_corresponding":true,"raw_author_name":"Felipe Encina-Chacana","raw_affiliation_strings":["Faculty of Engineering and Sciences, Universidad Adolfo Ib\u00e1\u00f1ez, Santiago, Chile"],"raw_orcid":"https://orcid.org/0009-0004-8375-4904","affiliations":[{"raw_affiliation_string":"Faculty of Engineering and Sciences, Universidad Adolfo Ib\u00e1\u00f1ez, Santiago, Chile","institution_ids":["https://openalex.org/I21067949"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5053436240","display_name":"Gonzalo A. Ruz","orcid":"https://orcid.org/0000-0001-7740-9865"},"institutions":[{"id":"https://openalex.org/I21067949","display_name":"Adolfo Ib\u00e1\u00f1ez University","ror":"https://ror.org/0326knt82","country_code":"CL","type":"education","lineage":["https://openalex.org/I21067949"]},{"id":"https://openalex.org/I4210101050","display_name":"Center of Applied Ecology & Sustainability","ror":"https://ror.org/016e3ca54","country_code":"CL","type":"facility","lineage":["https://openalex.org/I4210101050"]},{"id":"https://openalex.org/I4387154234","display_name":"Data Observatory Foundation","ror":"https://ror.org/027nn6b17","country_code":null,"type":"nonprofit","lineage":["https://openalex.org/I21067949","https://openalex.org/I4210090789","https://openalex.org/I4387154234"]}],"countries":["CL"],"is_corresponding":false,"raw_author_name":"Gonzalo A. Ruz","raw_affiliation_strings":["Center of Applied Ecology and Sustainability (CAPES), Santiago, Chile","Data Observatory Foundation, Santiago, Chile","Faculty of Engineering and Sciences, Universidad Adolfo Ib\u00e1\u00f1ez, Santiago, Chile"],"raw_orcid":"https://orcid.org/0000-0001-7740-9865","affiliations":[{"raw_affiliation_string":"Center of Applied Ecology and Sustainability (CAPES), Santiago, Chile","institution_ids":["https://openalex.org/I4210101050"]},{"raw_affiliation_string":"Data Observatory Foundation, Santiago, Chile","institution_ids":["https://openalex.org/I4387154234"]},{"raw_affiliation_string":"Faculty of Engineering and Sciences, Universidad Adolfo Ib\u00e1\u00f1ez, Santiago, Chile","institution_ids":["https://openalex.org/I21067949"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5114672191"],"corresponding_institution_ids":["https://openalex.org/I21067949"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":1.4212,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.83579517,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":null,"issue":null,"first_page":"161","last_page":"174"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9521999955177307,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9521999955177307,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10497","display_name":"Fungal and yeast genetics research","score":0.9458000063896179,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9341999888420105,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/boolean-network","display_name":"Boolean network","score":0.746193528175354},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7079724669456482},{"id":"https://openalex.org/keywords/operon","display_name":"Operon","score":0.6996445655822754},{"id":"https://openalex.org/keywords/tryptophanase","display_name":"Tryptophanase","score":0.6595962047576904},{"id":"https://openalex.org/keywords/boolean-model","display_name":"Boolean model","score":0.6343429088592529},{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.5587754249572754},{"id":"https://openalex.org/keywords/and-inverter-graph","display_name":"And-inverter graph","score":0.4981253147125244},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4174948036670685},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.37283453345298767},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.341025710105896},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.33024924993515015},{"id":"https://openalex.org/keywords/boolean-function","display_name":"Boolean function","score":0.25847679376602173},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.25036394596099854},{"id":"https://openalex.org/keywords/boolean-expression","display_name":"Boolean expression","score":0.2276497185230255},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.20827972888946533},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.1756315529346466},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.13003575801849365},{"id":"https://openalex.org/keywords/discrete-mathematics","display_name":"Discrete mathematics","score":0.11960279941558838},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.10798585414886475}],"concepts":[{"id":"https://openalex.org/C134444547","wikidata":"https://www.wikidata.org/wiki/Q585230","display_name":"Boolean network","level":3,"score":0.746193528175354},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7079724669456482},{"id":"https://openalex.org/C203075996","wikidata":"https://www.wikidata.org/wiki/Q139677","display_name":"Operon","level":4,"score":0.6996445655822754},{"id":"https://openalex.org/C2779649380","wikidata":"https://www.wikidata.org/wiki/Q7848809","display_name":"Tryptophanase","level":4,"score":0.6595962047576904},{"id":"https://openalex.org/C67499762","wikidata":"https://www.wikidata.org/wiki/Q4943358","display_name":"Boolean model","level":2,"score":0.6343429088592529},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.5587754249572754},{"id":"https://openalex.org/C196836630","wikidata":"https://www.wikidata.org/wiki/Q4753279","display_name":"And-inverter graph","level":4,"score":0.4981253147125244},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4174948036670685},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.37283453345298767},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.341025710105896},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.33024924993515015},{"id":"https://openalex.org/C187455244","wikidata":"https://www.wikidata.org/wiki/Q942353","display_name":"Boolean function","level":2,"score":0.25847679376602173},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.25036394596099854},{"id":"https://openalex.org/C158465420","wikidata":"https://www.wikidata.org/wiki/Q1979515","display_name":"Boolean expression","level":3,"score":0.2276497185230255},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.20827972888946533},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.1756315529346466},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.13003575801849365},{"id":"https://openalex.org/C118615104","wikidata":"https://www.wikidata.org/wiki/Q121416","display_name":"Discrete mathematics","level":1,"score":0.11960279941558838},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.10798585414886475},{"id":"https://openalex.org/C547475151","wikidata":"https://www.wikidata.org/wiki/Q25419","display_name":"Escherichia coli","level":3,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-031-76604-6_12","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-76604-6_12","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","score":0.6100000143051147,"display_name":"Zero hunger"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":28,"referenced_works":["https://openalex.org/W1930260923","https://openalex.org/W1990139847","https://openalex.org/W1991069019","https://openalex.org/W2051848379","https://openalex.org/W2056556558","https://openalex.org/W2062109421","https://openalex.org/W2063615892","https://openalex.org/W2084251771","https://openalex.org/W2102409426","https://openalex.org/W2288682339","https://openalex.org/W2296164026","https://openalex.org/W2483031229","https://openalex.org/W2590247680","https://openalex.org/W2751846886","https://openalex.org/W2781578762","https://openalex.org/W2945256088","https://openalex.org/W3008515144","https://openalex.org/W3081483388","https://openalex.org/W3131211126","https://openalex.org/W3196689760","https://openalex.org/W4280621781","https://openalex.org/W4289253811","https://openalex.org/W4293519307","https://openalex.org/W4300861298","https://openalex.org/W4306841595","https://openalex.org/W4313314779","https://openalex.org/W4323294265","https://openalex.org/W4366245748"],"related_works":["https://openalex.org/W2770822254","https://openalex.org/W2330768201","https://openalex.org/W1547839407","https://openalex.org/W4243221174","https://openalex.org/W1422717320","https://openalex.org/W2108419456","https://openalex.org/W2134315848","https://openalex.org/W2802063128","https://openalex.org/W4319977964","https://openalex.org/W4213370924"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-01-25T23:04:38.658462","created_date":"2025-10-10T00:00:00"}