{"id":"https://openalex.org/W4402790186","doi":"https://doi.org/10.1007/978-3-031-72353-7_10","title":"ProTeM: Unifying Protein Function Prediction via\u00a0Text Matching","display_name":"ProTeM: Unifying Protein Function Prediction via\u00a0Text Matching","publication_year":2024,"publication_date":"2024-01-01","ids":{"openalex":"https://openalex.org/W4402790186","doi":"https://doi.org/10.1007/978-3-031-72353-7_10"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-031-72353-7_10","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-72353-7_10","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5069749373","display_name":"Ming Qin","orcid":"https://orcid.org/0000-0002-0913-4246"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Ming Qin","raw_affiliation_strings":["ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou, China","Zhejiang University, Hangzhou, China"],"affiliations":[{"raw_affiliation_string":"ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou, China","institution_ids":[]},{"raw_affiliation_string":"Zhejiang University, Hangzhou, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100341859","display_name":"Xun Li","orcid":"https://orcid.org/0000-0002-6773-491X"},"institutions":[{"id":"https://openalex.org/I4210113480","display_name":"Mohamed bin Zayed University of Artificial Intelligence","ror":"https://ror.org/0258gkt32","country_code":"AE","type":"education","lineage":["https://openalex.org/I4210113480"]}],"countries":["AE"],"is_corresponding":false,"raw_author_name":"Xun Li","raw_affiliation_strings":["MBZUAI, Abu Dhabi, United Arab Emirates"],"affiliations":[{"raw_affiliation_string":"MBZUAI, Abu Dhabi, United Arab Emirates","institution_ids":["https://openalex.org/I4210113480"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108047957","display_name":"Yuhao Wang","orcid":"https://orcid.org/0000-0002-1279-9329"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuhao Wang","raw_affiliation_strings":["ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou, China","Zhejiang University, Hangzhou, China"],"affiliations":[{"raw_affiliation_string":"ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou, China","institution_ids":[]},{"raw_affiliation_string":"Zhejiang University, Hangzhou, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065104736","display_name":"Zhenping Li","orcid":"https://orcid.org/0000-0001-8590-8517"},"institutions":[{"id":"https://openalex.org/I4210144143","display_name":"Inspur (China)","ror":"https://ror.org/0474p4r72","country_code":"CN","type":"company","lineage":["https://openalex.org/I4210144143"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhenping Li","raw_affiliation_strings":["Inspur Software Technology Co., Ltd., Jinan, China"],"affiliations":[{"raw_affiliation_string":"Inspur Software Technology Co., Ltd., Jinan, China","institution_ids":["https://openalex.org/I4210144143"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058342791","display_name":"Hongbin Ye","orcid":"https://orcid.org/0000-0001-5727-5599"},"institutions":[{"id":"https://openalex.org/I4210123185","display_name":"Zhejiang Lab","ror":"https://ror.org/02m2h7991","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210123185"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hongbin Ye","raw_affiliation_strings":["Zhejiang Lab, Hangzhou, China"],"affiliations":[{"raw_affiliation_string":"Zhejiang Lab, Hangzhou, China","institution_ids":["https://openalex.org/I4210123185"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026451642","display_name":"Zongbing Wang","orcid":null},"institutions":[{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zongbing Wang","raw_affiliation_strings":["Huazhong University of Science and Technology, Wuhan, China"],"affiliations":[{"raw_affiliation_string":"Huazhong University of Science and Technology, Wuhan, China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079380666","display_name":"Weihao Gao","orcid":"https://orcid.org/0000-0002-5322-7730"},"institutions":[{"id":"https://openalex.org/I99065089","display_name":"Tsinghua University","ror":"https://ror.org/03cve4549","country_code":"CN","type":"education","lineage":["https://openalex.org/I99065089"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Weihao Gao","raw_affiliation_strings":["Tsinghua University, Beijing, China"],"affiliations":[{"raw_affiliation_string":"Tsinghua University, Beijing, China","institution_ids":["https://openalex.org/I99065089"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060335069","display_name":"Shangsong Liang","orcid":"https://orcid.org/0000-0003-1625-2168"},"institutions":[{"id":"https://openalex.org/I4210113480","display_name":"Mohamed bin Zayed University of Artificial Intelligence","ror":"https://ror.org/0258gkt32","country_code":"AE","type":"education","lineage":["https://openalex.org/I4210113480"]}],"countries":["AE"],"is_corresponding":false,"raw_author_name":"Shangsong Liang","raw_affiliation_strings":["MBZUAI, Abu Dhabi, United Arab Emirates"],"affiliations":[{"raw_affiliation_string":"MBZUAI, Abu Dhabi, United Arab Emirates","institution_ids":["https://openalex.org/I4210113480"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100382017","display_name":"Qiang Zhang","orcid":"https://orcid.org/0009-0006-0303-534X"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qiang Zhang","raw_affiliation_strings":["ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou, China","Zhejiang University, Hangzhou, China"],"affiliations":[{"raw_affiliation_string":"ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou, China","institution_ids":[]},{"raw_affiliation_string":"Zhejiang University, Hangzhou, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5032086683","display_name":"Keyan Ding","orcid":"https://orcid.org/0000-0003-2900-7313"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Keyan Ding","raw_affiliation_strings":["ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou, China","Zhejiang University, Hangzhou, China"],"affiliations":[{"raw_affiliation_string":"ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou, China","institution_ids":[]},{"raw_affiliation_string":"Zhejiang University, Hangzhou, China","institution_ids":["https://openalex.org/I76130692"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5069749373"],"corresponding_institution_ids":["https://openalex.org/I76130692"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.37439909,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"132","last_page":"146"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8279693126678467},{"id":"https://openalex.org/keywords/matching","display_name":"Matching (statistics)","score":0.5174927711486816},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.511431872844696},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.45489683747291565},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.33812111616134644},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.07744622230529785},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.05651840567588806}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8279693126678467},{"id":"https://openalex.org/C165064840","wikidata":"https://www.wikidata.org/wiki/Q1321061","display_name":"Matching (statistics)","level":2,"score":0.5174927711486816},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.511431872844696},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.45489683747291565},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.33812111616134644},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.07744622230529785},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.05651840567588806},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-031-72353-7_10","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-72353-7_10","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger","score":0.49000000953674316}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":23,"referenced_works":["https://openalex.org/W2117486996","https://openalex.org/W2152770371","https://openalex.org/W2730472814","https://openalex.org/W2794004073","https://openalex.org/W2980298350","https://openalex.org/W3135367836","https://openalex.org/W3141797743","https://openalex.org/W3146944767","https://openalex.org/W3148001440","https://openalex.org/W3153427360","https://openalex.org/W3164046276","https://openalex.org/W3177500196","https://openalex.org/W3177828909","https://openalex.org/W4281719345","https://openalex.org/W4285606530","https://openalex.org/W4312910992","https://openalex.org/W4312956471","https://openalex.org/W4318294156","https://openalex.org/W4327550249","https://openalex.org/W4379768905","https://openalex.org/W6601636429","https://openalex.org/W6763868836","https://openalex.org/W6778883912"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052","https://openalex.org/W2382290278","https://openalex.org/W3204019825"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-12-21T01:58:51.020947","created_date":"2025-10-10T00:00:00"}
