{"id":"https://openalex.org/W4401927787","doi":"https://doi.org/10.1007/978-3-031-64636-2_20","title":"Visualizing Horizontal Gene Transfer Detection in Phylogenetically Divergent Bacteria","display_name":"Visualizing Horizontal Gene Transfer Detection in Phylogenetically Divergent Bacteria","publication_year":2024,"publication_date":"2024-01-01","ids":{"openalex":"https://openalex.org/W4401927787","doi":"https://doi.org/10.1007/978-3-031-64636-2_20"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-031-64636-2_20","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-64636-2_20","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5015765065","display_name":"Jana Schwarzerov\u00e1","orcid":"https://orcid.org/0000-0003-2918-9313"},"institutions":[{"id":"https://openalex.org/I129774422","display_name":"University of Vienna","ror":"https://ror.org/03prydq77","country_code":"AT","type":"education","lineage":["https://openalex.org/I129774422"]},{"id":"https://openalex.org/I4210088935","display_name":"University Hospital Ostrava","ror":"https://ror.org/00a6yph09","country_code":"CZ","type":"healthcare","lineage":["https://openalex.org/I4210088935"]},{"id":"https://openalex.org/I60587646","display_name":"Brno University of Technology","ror":"https://ror.org/03613d656","country_code":"CZ","type":"education","lineage":["https://openalex.org/I60587646"]}],"countries":["AT","CZ"],"is_corresponding":true,"raw_author_name":"Jana Schwarzerova","raw_affiliation_strings":["Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Technicka 12, 616 00, Brno, Czech Republic","Department of Molecular and Clinical Pathology and Medical Genetics, University Hospital Ostrava, Ostrava, Czech Republic","Molecular Systems Biology (MOSYS), University of Vienna, Vienna, Austria"],"raw_orcid":"https://orcid.org/0000-0003-2918-9313","affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Technicka 12, 616 00, Brno, Czech Republic","institution_ids":["https://openalex.org/I60587646"]},{"raw_affiliation_string":"Department of Molecular and Clinical Pathology and Medical Genetics, University Hospital Ostrava, Ostrava, Czech Republic","institution_ids":["https://openalex.org/I4210088935"]},{"raw_affiliation_string":"Molecular Systems Biology (MOSYS), University of Vienna, Vienna, Austria","institution_ids":["https://openalex.org/I129774422"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106758597","display_name":"Laxmipriya Rajasekaran","orcid":"https://orcid.org/0009-0000-6401-7731"},"institutions":[{"id":"https://openalex.org/I60587646","display_name":"Brno University of Technology","ror":"https://ror.org/03613d656","country_code":"CZ","type":"education","lineage":["https://openalex.org/I60587646"]}],"countries":["CZ"],"is_corresponding":false,"raw_author_name":"Laxmipriya Rajasekaran","raw_affiliation_strings":["Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Technicka 12, 616 00, Brno, Czech Republic"],"raw_orcid":"https://orcid.org/0009-0000-6401-7731","affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Technicka 12, 616 00, Brno, Czech Republic","institution_ids":["https://openalex.org/I60587646"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051542992","display_name":"Katerina Jureckova","orcid":"https://orcid.org/0000-0001-5143-9521"},"institutions":[{"id":"https://openalex.org/I60587646","display_name":"Brno University of Technology","ror":"https://ror.org/03613d656","country_code":"CZ","type":"education","lineage":["https://openalex.org/I60587646"]}],"countries":["CZ"],"is_corresponding":false,"raw_author_name":"Katerina Jureckova","raw_affiliation_strings":["Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Technicka 12, 616 00, Brno, Czech Republic"],"raw_orcid":"https://orcid.org/0000-0001-5143-9521","affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Technicka 12, 616 00, Brno, Czech Republic","institution_ids":["https://openalex.org/I60587646"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106758598","display_name":"Julie Nejezchlebova","orcid":"https://orcid.org/0009-0008-2290-6467"},"institutions":[{"id":"https://openalex.org/I60587646","display_name":"Brno University of Technology","ror":"https://ror.org/03613d656","country_code":"CZ","type":"education","lineage":["https://openalex.org/I60587646"]}],"countries":["CZ"],"is_corresponding":false,"raw_author_name":"Julie Nejezchlebova","raw_affiliation_strings":["Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Technicka 12, 616 00, Brno, Czech Republic"],"raw_orcid":"https://orcid.org/0009-0008-2290-6467","affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Technicka 12, 616 00, Brno, Czech Republic","institution_ids":["https://openalex.org/I60587646"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020030684","display_name":"Margaret Varga","orcid":"https://orcid.org/0000-0002-9086-1626"},"institutions":[{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Margaret Varga","raw_affiliation_strings":["Department of Biology, University of Oxford, Oxfordshire, UK"],"raw_orcid":"https://orcid.org/0000-0002-9086-1626","affiliations":[{"raw_affiliation_string":"Department of Biology, University of Oxford, Oxfordshire, UK","institution_ids":["https://openalex.org/I40120149"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053620310","display_name":"Ivo Provazn\u00edk","orcid":"https://orcid.org/0000-0002-3422-7938"},"institutions":[{"id":"https://openalex.org/I60587646","display_name":"Brno University of Technology","ror":"https://ror.org/03613d656","country_code":"CZ","type":"education","lineage":["https://openalex.org/I60587646"]}],"countries":["CZ"],"is_corresponding":false,"raw_author_name":"Valentine Provaznik","raw_affiliation_strings":["Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Technicka 12, 616 00, Brno, Czech Republic"],"raw_orcid":"https://orcid.org/0000-0002-3422-7938","affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Technicka 12, 616 00, Brno, Czech Republic","institution_ids":["https://openalex.org/I60587646"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060741375","display_name":"Wolfram Weckwerth","orcid":"https://orcid.org/0000-0002-9719-6358"},"institutions":[{"id":"https://openalex.org/I129774422","display_name":"University of Vienna","ror":"https://ror.org/03prydq77","country_code":"AT","type":"education","lineage":["https://openalex.org/I129774422"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Wolfram Weckwerth","raw_affiliation_strings":["Molecular Systems Biology (MOSYS), University of Vienna, Vienna, Austria","Vienna Metabolomics Center (VIME), University of Vienna, Vienna, Austria"],"raw_orcid":"https://orcid.org/0000-0002-9719-6358","affiliations":[{"raw_affiliation_string":"Molecular Systems Biology (MOSYS), University of Vienna, Vienna, Austria","institution_ids":["https://openalex.org/I129774422"]},{"raw_affiliation_string":"Vienna Metabolomics Center (VIME), University of Vienna, Vienna, Austria","institution_ids":["https://openalex.org/I129774422"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5011338024","display_name":"Darina \u010cejkov\u00e1","orcid":"https://orcid.org/0000-0002-6989-6330"},"institutions":[{"id":"https://openalex.org/I60587646","display_name":"Brno University of Technology","ror":"https://ror.org/03613d656","country_code":"CZ","type":"education","lineage":["https://openalex.org/I60587646"]}],"countries":["CZ"],"is_corresponding":false,"raw_author_name":"Darina Cejkova","raw_affiliation_strings":["Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Technicka 12, 616 00, Brno, Czech Republic"],"raw_orcid":"https://orcid.org/0000-0002-6989-6330","affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Technicka 12, 616 00, Brno, Czech Republic","institution_ids":["https://openalex.org/I60587646"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5015765065"],"corresponding_institution_ids":["https://openalex.org/I129774422","https://openalex.org/I4210088935","https://openalex.org/I60587646"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"267","last_page":"277"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.9950000047683716,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.984000027179718,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/horizontal-gene-transfer","display_name":"Horizontal gene transfer","score":0.8992718458175659},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.628993809223175},{"id":"https://openalex.org/keywords/bacteria","display_name":"Bacteria","score":0.45900508761405945},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.32974469661712646},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.3104058802127838},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2057572901248932},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.20358720421791077}],"concepts":[{"id":"https://openalex.org/C92938381","wikidata":"https://www.wikidata.org/wiki/Q83185","display_name":"Horizontal gene transfer","level":4,"score":0.8992718458175659},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.628993809223175},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.45900508761405945},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.32974469661712646},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.3104058802127838},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2057572901248932},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.20358720421791077}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-031-64636-2_20","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-64636-2_20","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":17,"referenced_works":["https://openalex.org/W1980388270","https://openalex.org/W2089729008","https://openalex.org/W2092427184","https://openalex.org/W2144569138","https://openalex.org/W2795249971","https://openalex.org/W2803074811","https://openalex.org/W2991012415","https://openalex.org/W2995388458","https://openalex.org/W3027311537","https://openalex.org/W3039354324","https://openalex.org/W3156458251","https://openalex.org/W3164961447","https://openalex.org/W4235863568","https://openalex.org/W4388203773","https://openalex.org/W4388749506","https://openalex.org/W4389801138","https://openalex.org/W4399613453"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W2264917134","https://openalex.org/W2505308311","https://openalex.org/W4249861864","https://openalex.org/W3149326312","https://openalex.org/W1833347391","https://openalex.org/W1978909060","https://openalex.org/W2118437475","https://openalex.org/W2043760664"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
