{"id":"https://openalex.org/W4386870921","doi":"https://doi.org/10.1007/978-3-031-43980-3_19","title":"A Simple Grammar-Based Index for\u00a0Finding Approximately Longest Common Substrings","display_name":"A Simple Grammar-Based Index for\u00a0Finding Approximately Longest Common Substrings","publication_year":2023,"publication_date":"2023-01-01","ids":{"openalex":"https://openalex.org/W4386870921","doi":"https://doi.org/10.1007/978-3-031-43980-3_19","pmid":"https://pubmed.ncbi.nlm.nih.gov/41394267"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-031-43980-3_19","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-43980-3_19","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12700360/pdf/nihms-2112373.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5013172801","display_name":"Travis Gagie","orcid":"https://orcid.org/0000-0003-3689-327X"},"institutions":[{"id":"https://openalex.org/I129902397","display_name":"Dalhousie University","ror":"https://ror.org/01e6qks80","country_code":"CA","type":"education","lineage":["https://openalex.org/I129902397"]},{"id":"https://openalex.org/I4210086090","display_name":"Fraunhofer Chile Research Foundation","ror":"https://ror.org/00h0my365","country_code":"CL","type":"facility","lineage":["https://openalex.org/I4210086090","https://openalex.org/I4923324"]},{"id":"https://openalex.org/I4210167387","display_name":"Institute for Biotechnology and Bioengineering","ror":"https://ror.org/05ws8g470","country_code":"PT","type":"facility","lineage":["https://openalex.org/I4210167387"]}],"countries":["CA","CL","PT"],"is_corresponding":true,"raw_author_name":"Travis Gagie","raw_affiliation_strings":["CeBiB - Center for Biotechnology and Bioengineering, Chile","Faculty of Computer Science, Dalhousie University, Halifax, Canada","CeBiB\u2014Center for Biotechnology and Bioengineering, Santiago, Chile"],"raw_orcid":"https://orcid.org/0000-0003-3689-327X","affiliations":[{"raw_affiliation_string":"CeBiB - Center for Biotechnology and Bioengineering, Chile","institution_ids":["https://openalex.org/I4210167387"]},{"raw_affiliation_string":"Faculty of Computer Science, Dalhousie University, Halifax, Canada","institution_ids":["https://openalex.org/I129902397"]},{"raw_affiliation_string":"CeBiB\u2014Center for Biotechnology and Bioengineering, Santiago, Chile","institution_ids":["https://openalex.org/I4210086090"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039683156","display_name":"Sana Kashgouli","orcid":"https://orcid.org/0009-0008-1583-2914"},"institutions":[{"id":"https://openalex.org/I129902397","display_name":"Dalhousie University","ror":"https://ror.org/01e6qks80","country_code":"CA","type":"education","lineage":["https://openalex.org/I129902397"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Sana Kashgouli","raw_affiliation_strings":["Faculty of Computer Science, Dalhousie University, Halifax, Canada"],"raw_orcid":"https://orcid.org/0009-0008-1583-2914","affiliations":[{"raw_affiliation_string":"Faculty of Computer Science, Dalhousie University, Halifax, Canada","institution_ids":["https://openalex.org/I129902397"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5080743153","display_name":"Gonzalo Navarro","orcid":"https://orcid.org/0000-0002-2286-741X"},"institutions":[{"id":"https://openalex.org/I4210086090","display_name":"Fraunhofer Chile Research Foundation","ror":"https://ror.org/00h0my365","country_code":"CL","type":"facility","lineage":["https://openalex.org/I4210086090","https://openalex.org/I4923324"]},{"id":"https://openalex.org/I4210167387","display_name":"Institute for Biotechnology and Bioengineering","ror":"https://ror.org/05ws8g470","country_code":"PT","type":"facility","lineage":["https://openalex.org/I4210167387"]},{"id":"https://openalex.org/I69737025","display_name":"University of Chile","ror":"https://ror.org/047gc3g35","country_code":"CL","type":"education","lineage":["https://openalex.org/I69737025"]}],"countries":["CL","PT"],"is_corresponding":false,"raw_author_name":"Gonzalo Navarro","raw_affiliation_strings":["CeBiB - Center for Biotechnology and Bioengineering, Chile","Dept. of Computer Science, University of Chile, Santiago, Chile","CeBiB\u2014Center for Biotechnology and Bioengineering, Santiago, Chile","Department of Computer Science, University of Chile, Santiago, Chile"],"raw_orcid":"https://orcid.org/0000-0002-2286-741X","affiliations":[{"raw_affiliation_string":"CeBiB - Center for Biotechnology and Bioengineering, Chile","institution_ids":["https://openalex.org/I4210167387"]},{"raw_affiliation_string":"Dept. of Computer Science, University of Chile, Santiago, Chile","institution_ids":["https://openalex.org/I69737025"]},{"raw_affiliation_string":"CeBiB\u2014Center for Biotechnology and Bioengineering, Santiago, Chile","institution_ids":["https://openalex.org/I4210086090"]},{"raw_affiliation_string":"Department of Computer Science, University of Chile, Santiago, Chile","institution_ids":["https://openalex.org/I69737025"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5013172801"],"corresponding_institution_ids":["https://openalex.org/I129902397","https://openalex.org/I4210086090","https://openalex.org/I4210167387"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.2172,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.4495301,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":"14240","issue":null,"first_page":"246","last_page":"252"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11567","display_name":"semigroups and automata theory","score":0.9851999878883362,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13664","display_name":"Genome Rearrangement Algorithms","score":0.9361000061035156,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/substring","display_name":"Substring","score":0.9555568695068359},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.6387727856636047},{"id":"https://openalex.org/keywords/correctness","display_name":"Correctness","score":0.6253429055213928},{"id":"https://openalex.org/keywords/grammar","display_name":"Grammar","score":0.5681238174438477},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5122014880180359},{"id":"https://openalex.org/keywords/simple","display_name":"Simple (philosophy)","score":0.4749436676502228},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.3909255862236023},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.35326218605041504},{"id":"https://openalex.org/keywords/data-structure","display_name":"Data structure","score":0.2283245325088501},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.07648700475692749},{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.05572354793548584}],"concepts":[{"id":"https://openalex.org/C182407805","wikidata":"https://www.wikidata.org/wiki/Q2626534","display_name":"Substring","level":3,"score":0.9555568695068359},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.6387727856636047},{"id":"https://openalex.org/C55439883","wikidata":"https://www.wikidata.org/wiki/Q360812","display_name":"Correctness","level":2,"score":0.6253429055213928},{"id":"https://openalex.org/C26022165","wikidata":"https://www.wikidata.org/wiki/Q8091","display_name":"Grammar","level":2,"score":0.5681238174438477},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5122014880180359},{"id":"https://openalex.org/C2780586882","wikidata":"https://www.wikidata.org/wiki/Q7520643","display_name":"Simple (philosophy)","level":2,"score":0.4749436676502228},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.3909255862236023},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.35326218605041504},{"id":"https://openalex.org/C162319229","wikidata":"https://www.wikidata.org/wiki/Q175263","display_name":"Data structure","level":2,"score":0.2283245325088501},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.07648700475692749},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.05572354793548584},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/978-3-031-43980-3_19","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-43980-3_19","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmid:41394267","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41394267","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Symposium on String Processing and Information Retrieval : SPIRE ... : proceedings. SPIRE (Symposium)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:12700360","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12700360/","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12700360/pdf/nihms-2112373.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Int Symp String Process Inf Retr","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:12700360","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12700360/","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12700360/pdf/nihms-2112373.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Int Symp String Process Inf Retr","raw_type":"Text"},"sustainable_development_goals":[{"score":0.4399999976158142,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[{"id":"https://openalex.org/G1646130523","display_name":null,"funder_award_id":"DBI-2029552","funder_id":"https://openalex.org/F4320332167","funder_display_name":"Directorate for Biological Sciences"},{"id":"https://openalex.org/G2241781793","display_name":null,"funder_award_id":"R01HG011392","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G2341366841","display_name":null,"funder_award_id":"DBI-2029552","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G2344728784","display_name":null,"funder_award_id":"RGPIN071852020","funder_id":"https://openalex.org/F4320334593","funder_display_name":"Natural Sciences and Engineering Research Council of Canada"},{"id":"https://openalex.org/G270470657","display_name":"IIBR Informatics: An Efficient Pangenomics Graph Aligner","funder_award_id":"2029552","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G5050383059","display_name":null,"funder_award_id":"R01HG011392","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"},{"id":"https://openalex.org/G7077011381","display_name":null,"funder_award_id":"2029552","funder_id":"https://openalex.org/F4320332167","funder_display_name":"Directorate for Biological Sciences"},{"id":"https://openalex.org/G8595214394","display_name":"CENTRE FOR BIOTECHNOLOGY AND BIOENGINEERING","funder_award_id":"FB0001","funder_id":"https://openalex.org/F4320331146","funder_display_name":"Agencia Nacional de Investigaci\u00f3n y Desarrollo"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320331146","display_name":"Agencia Nacional de Investigaci\u00f3n y Desarrollo","ror":null},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332167","display_name":"Directorate for Biological Sciences","ror":"https://ror.org/001xhss06"},{"id":"https://openalex.org/F4320334593","display_name":"Natural Sciences and Engineering Research Council of Canada","ror":"https://ror.org/01h531d29"},{"id":"https://openalex.org/F4320337348","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4386870921.pdf"},"referenced_works_count":12,"referenced_works":["https://openalex.org/W1972418517","https://openalex.org/W2040972922","https://openalex.org/W2113004376","https://openalex.org/W2130956967","https://openalex.org/W2135639194","https://openalex.org/W2794898040","https://openalex.org/W2811428366","https://openalex.org/W3114553168","https://openalex.org/W3127125728","https://openalex.org/W3135348097","https://openalex.org/W3208600296","https://openalex.org/W4403761952"],"related_works":["https://openalex.org/W2072806201","https://openalex.org/W1978042415","https://openalex.org/W2024218563","https://openalex.org/W1517743118","https://openalex.org/W2088298145","https://openalex.org/W1887191277","https://openalex.org/W1516169988","https://openalex.org/W2965845133","https://openalex.org/W2281090687","https://openalex.org/W1997583263"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-08-01T09:00:35.917206","created_date":"2025-10-10T00:00:00"}
