{"id":"https://openalex.org/W4379660331","doi":"https://doi.org/10.1007/978-3-031-34048-2_26","title":"Learning Probabilistic Piecewise Rigid Atlases of\u00a0Model Organisms via\u00a0Generative Deep Networks","display_name":"Learning Probabilistic Piecewise Rigid Atlases of\u00a0Model Organisms via\u00a0Generative Deep Networks","publication_year":2023,"publication_date":"2023-01-01","ids":{"openalex":"https://openalex.org/W4379660331","doi":"https://doi.org/10.1007/978-3-031-34048-2_26","pmid":"https://pubmed.ncbi.nlm.nih.gov/37476079"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-031-34048-2_26","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-34048-2_26","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10358289/pdf/nihms-1910173.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5089905290","display_name":"Amin Nejatbakhsh","orcid":"https://orcid.org/0000-0001-5155-4757"},"institutions":[{"id":"https://openalex.org/I78577930","display_name":"Columbia University","ror":"https://ror.org/00hj8s172","country_code":"US","type":"education","lineage":["https://openalex.org/I78577930"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Amin Nejatbakhsh","raw_affiliation_strings":["Departments of Neuroscience and Statistics, Columbia University, New York, USA"],"affiliations":[{"raw_affiliation_string":"Departments of Neuroscience and Statistics, Columbia University, New York, USA","institution_ids":["https://openalex.org/I78577930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036730225","display_name":"Neel Dey","orcid":"https://orcid.org/0000-0003-1427-6406"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Neel Dey","raw_affiliation_strings":["Computer Science and Artificial Intelligence Lab, MIT, Massachusetts, USA"],"affiliations":[{"raw_affiliation_string":"Computer Science and Artificial Intelligence Lab, MIT, Massachusetts, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068804763","display_name":"Vivek Venkatachalam","orcid":"https://orcid.org/0000-0002-2414-7416"},"institutions":[{"id":"https://openalex.org/I12912129","display_name":"Northeastern University","ror":"https://ror.org/04t5xt781","country_code":"US","type":"education","lineage":["https://openalex.org/I12912129"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Vivek Venkatachalam","raw_affiliation_strings":["Department of Physics, Northeastern University, Boston, USA"],"affiliations":[{"raw_affiliation_string":"Department of Physics, Northeastern University, Boston, USA","institution_ids":["https://openalex.org/I12912129"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091068752","display_name":"Eviatar Yemini","orcid":"https://orcid.org/0000-0003-1977-0761"},"institutions":[{"id":"https://openalex.org/I166722992","display_name":"University of Massachusetts Chan Medical School","ror":"https://ror.org/0464eyp60","country_code":"US","type":"education","lineage":["https://openalex.org/I166722992"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Eviatar Yemini","raw_affiliation_strings":["Department of Neurobiology, University of Massachusetts Chan Medical School, Worcester, USA"],"affiliations":[{"raw_affiliation_string":"Department of Neurobiology, University of Massachusetts Chan Medical School, Worcester, USA","institution_ids":["https://openalex.org/I166722992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023278055","display_name":"Liam Paninski","orcid":"https://orcid.org/0000-0002-0276-7032"},"institutions":[{"id":"https://openalex.org/I78577930","display_name":"Columbia University","ror":"https://ror.org/00hj8s172","country_code":"US","type":"education","lineage":["https://openalex.org/I78577930"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Liam Paninski","raw_affiliation_strings":["Departments of Neuroscience and Statistics, Columbia University, New York, USA"],"affiliations":[{"raw_affiliation_string":"Departments of Neuroscience and Statistics, Columbia University, New York, USA","institution_ids":["https://openalex.org/I78577930"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5081027256","display_name":"Erdem Varol","orcid":"https://orcid.org/0000-0002-6128-8939"},"institutions":[{"id":"https://openalex.org/I57206974","display_name":"New York University","ror":"https://ror.org/0190ak572","country_code":"US","type":"education","lineage":["https://openalex.org/I57206974"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Erdem Varol","raw_affiliation_strings":["Department of Computer Science and Engineering, New York University, New York, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, New York University, New York, USA","institution_ids":["https://openalex.org/I57206974"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5089905290"],"corresponding_institution_ids":["https://openalex.org/I78577930"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.1300813,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"13939","issue":null,"first_page":"332","last_page":"343"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10676","display_name":"Genetics, Aging, and Longevity in Model Organisms","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1302","display_name":"Aging"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10676","display_name":"Genetics, Aging, and Longevity in Model Organisms","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1302","display_name":"Aging"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12417","display_name":"Morphological variations and asymmetry","score":0.9760000109672546,"subfield":{"id":"https://openalex.org/subfields/2608","display_name":"Geometry and Topology"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9218999743461609,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7668165564537048},{"id":"https://openalex.org/keywords/atlas","display_name":"Atlas (anatomy)","score":0.704975426197052},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6162506341934204},{"id":"https://openalex.org/keywords/probabilistic-logic","display_name":"Probabilistic logic","score":0.5438095331192017},{"id":"https://openalex.org/keywords/generative-model","display_name":"Generative model","score":0.5416207313537598},{"id":"https://openalex.org/keywords/piecewise","display_name":"Piecewise","score":0.5284029245376587},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.440653532743454},{"id":"https://openalex.org/keywords/statistical-model","display_name":"Statistical model","score":0.4273883104324341},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.35871827602386475},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.35086241364479065},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.34297245740890503},{"id":"https://openalex.org/keywords/generative-grammar","display_name":"Generative grammar","score":0.3273417055606842},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.12728548049926758},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.11583730578422546},{"id":"https://openalex.org/keywords/anatomy","display_name":"Anatomy","score":0.11079037189483643}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7668165564537048},{"id":"https://openalex.org/C2776673561","wikidata":"https://www.wikidata.org/wiki/Q655357","display_name":"Atlas (anatomy)","level":2,"score":0.704975426197052},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6162506341934204},{"id":"https://openalex.org/C49937458","wikidata":"https://www.wikidata.org/wiki/Q2599292","display_name":"Probabilistic logic","level":2,"score":0.5438095331192017},{"id":"https://openalex.org/C167966045","wikidata":"https://www.wikidata.org/wiki/Q5532625","display_name":"Generative model","level":3,"score":0.5416207313537598},{"id":"https://openalex.org/C164660894","wikidata":"https://www.wikidata.org/wiki/Q2037833","display_name":"Piecewise","level":2,"score":0.5284029245376587},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.440653532743454},{"id":"https://openalex.org/C114289077","wikidata":"https://www.wikidata.org/wiki/Q3284399","display_name":"Statistical model","level":2,"score":0.4273883104324341},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.35871827602386475},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.35086241364479065},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.34297245740890503},{"id":"https://openalex.org/C39890363","wikidata":"https://www.wikidata.org/wiki/Q36108","display_name":"Generative grammar","level":2,"score":0.3273417055606842},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.12728548049926758},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.11583730578422546},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.11079037189483643},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/978-3-031-34048-2_26","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-34048-2_26","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmid:37476079","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37476079","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Information processing in medical imaging : proceedings of the ... conference","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10358289","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10358289","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10358289/pdf/nihms-1910173.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Inf Process Med Imaging","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:10358289","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10358289","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10358289/pdf/nihms-1910173.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Inf Process Med Imaging","raw_type":"Text"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4379660331.pdf"},"referenced_works_count":33,"referenced_works":["https://openalex.org/W1527923149","https://openalex.org/W1557415053","https://openalex.org/W1933819638","https://openalex.org/W1967251218","https://openalex.org/W1986006829","https://openalex.org/W1996728217","https://openalex.org/W2006896953","https://openalex.org/W2009774868","https://openalex.org/W2067522317","https://openalex.org/W2082484987","https://openalex.org/W2109273473","https://openalex.org/W2121014637","https://openalex.org/W2134157700","https://openalex.org/W2141983233","https://openalex.org/W2144538224","https://openalex.org/W2149404019","https://openalex.org/W2153119123","https://openalex.org/W2157150618","https://openalex.org/W2789013707","https://openalex.org/W2957505491","https://openalex.org/W2962637298","https://openalex.org/W2968479890","https://openalex.org/W2980075948","https://openalex.org/W3089395154","https://openalex.org/W3116063736","https://openalex.org/W3142467333","https://openalex.org/W3161718667","https://openalex.org/W3168670653","https://openalex.org/W3195882875","https://openalex.org/W4281960124","https://openalex.org/W4286210255","https://openalex.org/W4313070140","https://openalex.org/W4317564269"],"related_works":["https://openalex.org/W4246061918","https://openalex.org/W2026567649","https://openalex.org/W2040674109","https://openalex.org/W3088213682","https://openalex.org/W2993014927","https://openalex.org/W2342095440","https://openalex.org/W2266807369","https://openalex.org/W3201172630","https://openalex.org/W3048671136","https://openalex.org/W2994947658"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-01-21T23:30:37.877113","created_date":"2025-10-10T00:00:00"}
