{"id":"https://openalex.org/W4317181457","doi":"https://doi.org/10.1007/978-3-031-21534-6_5","title":"Graph-Based Methods for\u00a0Rational Drug Design","display_name":"Graph-Based Methods for\u00a0Rational Drug Design","publication_year":2022,"publication_date":"2022-01-01","ids":{"openalex":"https://openalex.org/W4317181457","doi":"https://doi.org/10.1007/978-3-031-21534-6_5"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-031-21534-6_5","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-031-21534-6_5","pdf_url":"https://link.springer.com/content/pdf/10.1007/978-3-031-21534-6_5.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://link.springer.com/content/pdf/10.1007/978-3-031-21534-6_5.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5027624690","display_name":"Andre Droschinsky","orcid":"https://orcid.org/0000-0002-7983-3739"},"institutions":[{"id":"https://openalex.org/I200332995","display_name":"TU Dortmund University","ror":"https://ror.org/01k97gp34","country_code":"DE","type":"education","lineage":["https://openalex.org/I200332995"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Andre Droschinsky","raw_affiliation_strings":["Department of Computer Science, TU Dortmund University, Dortmund, Germany"],"raw_orcid":"https://orcid.org/0000-0002-7983-3739","affiliations":[{"raw_affiliation_string":"Department of Computer Science, TU Dortmund University, Dortmund, Germany","institution_ids":["https://openalex.org/I200332995"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015053198","display_name":"Lina Humbeck","orcid":"https://orcid.org/0000-0003-3151-9158"},"institutions":[{"id":"https://openalex.org/I1330995197","display_name":"Boehringer Ingelheim (Germany)","ror":"https://ror.org/00q32j219","country_code":"DE","type":"company","lineage":["https://openalex.org/I1330995197"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Lina Humbeck","raw_affiliation_strings":["Computational Chemistry, Medicinal Chemistry, Boehringer Ingelheim Pharma GmbH & Co. KG, Ingelheim am Rhein, Germany"],"raw_orcid":"https://orcid.org/0000-0003-3151-9158","affiliations":[{"raw_affiliation_string":"Computational Chemistry, Medicinal Chemistry, Boehringer Ingelheim Pharma GmbH & Co. KG, Ingelheim am Rhein, Germany","institution_ids":["https://openalex.org/I1330995197"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031181726","display_name":"Oliver Koch","orcid":"https://orcid.org/0000-0001-9228-217X"},"institutions":[{"id":"https://openalex.org/I22465464","display_name":"University of M\u00fcnster","ror":"https://ror.org/00pd74e08","country_code":"DE","type":"education","lineage":["https://openalex.org/I22465464"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Oliver Koch","raw_affiliation_strings":["Institute of Pharmaceutical and Medicinal Chemistry, and Center for Multiscale Theory and Computation, University of M\u00fcnster, M\u00fcnster, Germany"],"raw_orcid":"https://orcid.org/0000-0001-9228-217X","affiliations":[{"raw_affiliation_string":"Institute of Pharmaceutical and Medicinal Chemistry, and Center for Multiscale Theory and Computation, University of M\u00fcnster, M\u00fcnster, Germany","institution_ids":["https://openalex.org/I22465464"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009569829","display_name":"Nils M. Kriege","orcid":"https://orcid.org/0000-0003-2645-947X"},"institutions":[{"id":"https://openalex.org/I129774422","display_name":"University of Vienna","ror":"https://ror.org/03prydq77","country_code":"AT","type":"education","lineage":["https://openalex.org/I129774422"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Nils M. Kriege","raw_affiliation_strings":["Faculty of Computer Science, University of Vienna, Vienna, Austria"],"raw_orcid":"https://orcid.org/0000-0003-2645-947X","affiliations":[{"raw_affiliation_string":"Faculty of Computer Science, University of Vienna, Vienna, Austria","institution_ids":["https://openalex.org/I129774422"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012801992","display_name":"Petra Mutzel","orcid":"https://orcid.org/0000-0001-7621-971X"},"institutions":[{"id":"https://openalex.org/I135140700","display_name":"University of Bonn","ror":"https://ror.org/041nas322","country_code":"DE","type":"education","lineage":["https://openalex.org/I135140700"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Petra Mutzel","raw_affiliation_strings":["Institute for Computer Science, University of Bonn, Bonn, Germany"],"raw_orcid":"https://orcid.org/0000-0001-7621-971X","affiliations":[{"raw_affiliation_string":"Institute for Computer Science, University of Bonn, Bonn, Germany","institution_ids":["https://openalex.org/I135140700"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5021943398","display_name":"Till Sch\u00e4fer","orcid":"https://orcid.org/0000-0003-1709-1925"},"institutions":[{"id":"https://openalex.org/I135140700","display_name":"University of Bonn","ror":"https://ror.org/041nas322","country_code":"DE","type":"education","lineage":["https://openalex.org/I135140700"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Till Sch\u00e4fer","raw_affiliation_strings":["Institute for Computer Science, University of Bonn, Bonn, Germany"],"raw_orcid":"https://orcid.org/0000-0003-1709-1925","affiliations":[{"raw_affiliation_string":"Institute for Computer Science, University of Bonn, Bonn, Germany","institution_ids":["https://openalex.org/I135140700"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5012801992"],"corresponding_institution_ids":["https://openalex.org/I135140700"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":{"value":5000,"currency":"EUR","value_usd":5392},"fwci":1.3267,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.84436573,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":95},"biblio":{"volume":null,"issue":null,"first_page":"76","last_page":"96"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10911","display_name":"Chemical Synthesis and Analysis","score":0.9674999713897705,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11440","display_name":"Click Chemistry and Applications","score":0.9502999782562256,"subfield":{"id":"https://openalex.org/subfields/1605","display_name":"Organic Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8135789632797241},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.5787864923477173},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5728541612625122},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.5620938539505005},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.5322059988975525},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.49543988704681396},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4263577461242676},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4258801341056824},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.21324065327644348},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.08050304651260376}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8135789632797241},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.5787864923477173},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5728541612625122},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.5620938539505005},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.5322059988975525},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.49543988704681396},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4263577461242676},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4258801341056824},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.21324065327644348},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.08050304651260376},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-031-21534-6_5","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-031-21534-6_5","pdf_url":"https://link.springer.com/content/pdf/10.1007/978-3-031-21534-6_5.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":{"id":"doi:10.1007/978-3-031-21534-6_5","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-031-21534-6_5","pdf_url":"https://link.springer.com/content/pdf/10.1007/978-3-031-21534-6_5.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"sustainable_development_goals":[{"score":0.6399999856948853,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G8909796238","display_name":null,"funder_award_id":"SPP 1736","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"}],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"},{"id":"https://openalex.org/F4320329559","display_name":"Technische Universit\u00e4t Dortmund","ror":"https://ror.org/01k97gp34"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4317181457.pdf"},"referenced_works_count":56,"referenced_works":["https://openalex.org/W87060577","https://openalex.org/W108777047","https://openalex.org/W1529345033","https://openalex.org/W1549727926","https://openalex.org/W1595350250","https://openalex.org/W1647126819","https://openalex.org/W1672197616","https://openalex.org/W1757990252","https://openalex.org/W1963920197","https://openalex.org/W1967592256","https://openalex.org/W1972190210","https://openalex.org/W1975141043","https://openalex.org/W1975875968","https://openalex.org/W1982870104","https://openalex.org/W1988037271","https://openalex.org/W1998355166","https://openalex.org/W2002116543","https://openalex.org/W2022444336","https://openalex.org/W2047260621","https://openalex.org/W2051658231","https://openalex.org/W2071321387","https://openalex.org/W2071949631","https://openalex.org/W2071975644","https://openalex.org/W2084903757","https://openalex.org/W2096360825","https://openalex.org/W2103626206","https://openalex.org/W2105687791","https://openalex.org/W2114704115","https://openalex.org/W2116105292","https://openalex.org/W2125687218","https://openalex.org/W2133286004","https://openalex.org/W2170082200","https://openalex.org/W2172024214","https://openalex.org/W2179066627","https://openalex.org/W2205700110","https://openalex.org/W2210685190","https://openalex.org/W2278967895","https://openalex.org/W2472085920","https://openalex.org/W2532619499","https://openalex.org/W2543923633","https://openalex.org/W2613791735","https://openalex.org/W2764312879","https://openalex.org/W2791678506","https://openalex.org/W2925177113","https://openalex.org/W2962762795","https://openalex.org/W2962906985","https://openalex.org/W2963589575","https://openalex.org/W2971253248","https://openalex.org/W2999544683","https://openalex.org/W3097145107","https://openalex.org/W3103523530","https://openalex.org/W3113296199","https://openalex.org/W3124172763","https://openalex.org/W3141855080","https://openalex.org/W4232574948","https://openalex.org/W4254311734"],"related_works":["https://openalex.org/W2804364458","https://openalex.org/W4298130764","https://openalex.org/W2132641928","https://openalex.org/W4310225030","https://openalex.org/W2090259340","https://openalex.org/W2083665254","https://openalex.org/W2393816671","https://openalex.org/W1534720161","https://openalex.org/W1926736923","https://openalex.org/W2804957450"],"abstract_inverted_index":{"Abstract":[0],"Rational":[1],"drug":[2],"design":[3],"deals":[4],"with":[5,64],"computational":[6],"methods":[7,53],"to":[8,21,106],"accelerate":[9],"the":[10,33,57,60,83],"development":[11],"of":[12,25,35,52,59,86],"new":[13],"drugs.":[14],"Among":[15],"other":[16],"tasks,":[17],"it":[18],"is":[19,54],"necessary":[20],"analyze":[22],"huge":[23],"databases":[24],"small":[26],"molecules.":[27],"Since":[28],"a":[29,49],"direct":[30],"relationship":[31],"between":[32],"structure":[34],"these":[36],"molecules":[37,61],"and":[38,76,79,103],"their":[39,104],"effect":[40],"(e.g.,":[41],"toxicity)":[42],"can":[43],"be":[44],"assumed":[45],"in":[46],"many":[47],"cases,":[48],"wide":[50],"set":[51],"based":[55],"on":[56],"modeling":[58],"as":[62],"graphs":[63],"attributes.":[65],"Here,":[66],"we":[67,92],"discuss":[68,93],"our":[69],"results":[70],"concerning":[71],"structural":[72],"molecular":[73,77],"similarity":[74,88,98],"searches":[75],"clustering":[78],"put":[80],"them":[81],"into":[82],"wider":[84],"context":[85],"graph":[87,97],"search.":[89],"In":[90],"particular,":[91],"algorithms":[94],"for":[95],"computing":[96],"w.r.t.":[99],"maximum":[100],"common":[101],"subgraphs":[102],"extension":[105],"domain":[107],"specific":[108],"requirements.":[109]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1}],"updated_date":"2026-06-13T06:13:01.061226","created_date":"2025-10-10T00:00:00"}
