{"id":"https://openalex.org/W4312507510","doi":"https://doi.org/10.1007/978-3-031-20837-9_6","title":"Improving Bacterial sRNA Identification By Combining Genomic Context and Sequence-Derived Features","display_name":"Improving Bacterial sRNA Identification By Combining Genomic Context and Sequence-Derived Features","publication_year":2022,"publication_date":"2022-01-01","ids":{"openalex":"https://openalex.org/W4312507510","doi":"https://doi.org/10.1007/978-3-031-20837-9_6"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-031-20837-9_6","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-20837-9_6","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5028444194","display_name":"Mohammad Sorkhian","orcid":null},"institutions":[{"id":"https://openalex.org/I130438778","display_name":"Memorial University of Newfoundland","ror":"https://ror.org/04haebc03","country_code":"CA","type":"education","lineage":["https://openalex.org/I130438778"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Mohammad Sorkhian","raw_affiliation_strings":["Department of Computer Science, Memorial University of Newfoundland, St. John\u2019s, Canada","Department of Computer Science, Memorial University of Newfoundland, St. John's, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Memorial University of Newfoundland, St. John\u2019s, Canada","institution_ids":["https://openalex.org/I130438778"]},{"raw_affiliation_string":"Department of Computer Science, Memorial University of Newfoundland, St. John's, Canada","institution_ids":["https://openalex.org/I130438778"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048501229","display_name":"Megha Nagari","orcid":null},"institutions":[{"id":"https://openalex.org/I130438778","display_name":"Memorial University of Newfoundland","ror":"https://ror.org/04haebc03","country_code":"CA","type":"education","lineage":["https://openalex.org/I130438778"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Megha Nagari","raw_affiliation_strings":["Department of Computer Science, Memorial University of Newfoundland, St. John\u2019s, Canada","Department of Computer Science, Memorial University of Newfoundland, St. John's, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Memorial University of Newfoundland, St. John\u2019s, Canada","institution_ids":["https://openalex.org/I130438778"]},{"raw_affiliation_string":"Department of Computer Science, Memorial University of Newfoundland, St. John's, Canada","institution_ids":["https://openalex.org/I130438778"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034562210","display_name":"Moustafa Elsisy","orcid":null},"institutions":[{"id":"https://openalex.org/I130438778","display_name":"Memorial University of Newfoundland","ror":"https://ror.org/04haebc03","country_code":"CA","type":"education","lineage":["https://openalex.org/I130438778"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Moustafa Elsisy","raw_affiliation_strings":["Department of Computer Science, Memorial University of Newfoundland, St. John\u2019s, Canada","Department of Computer Science, Memorial University of Newfoundland, St. John's, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Memorial University of Newfoundland, St. John\u2019s, Canada","institution_ids":["https://openalex.org/I130438778"]},{"raw_affiliation_string":"Department of Computer Science, Memorial University of Newfoundland, St. John's, Canada","institution_ids":["https://openalex.org/I130438778"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5044078900","display_name":"Lourdes Pe\u00f1a\u2010Castillo","orcid":"https://orcid.org/0000-0002-0643-2547"},"institutions":[{"id":"https://openalex.org/I130438778","display_name":"Memorial University of Newfoundland","ror":"https://ror.org/04haebc03","country_code":"CA","type":"education","lineage":["https://openalex.org/I130438778"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Lourdes Pe\u00f1a-Castillo","raw_affiliation_strings":["Department of Biology, Memorial University of Newfoundland, St. John\u2019s, Canada","Department of Computer Science, Memorial University of Newfoundland, St. John\u2019s, Canada","Department of Biology, Memorial University of Newfoundland, St. John's, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Biology, Memorial University of Newfoundland, St. John\u2019s, Canada","institution_ids":["https://openalex.org/I130438778"]},{"raw_affiliation_string":"Department of Computer Science, Memorial University of Newfoundland, St. John\u2019s, Canada","institution_ids":["https://openalex.org/I130438778"]},{"raw_affiliation_string":"Department of Biology, Memorial University of Newfoundland, St. John's, Canada","institution_ids":["https://openalex.org/I130438778"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5044078900"],"corresponding_institution_ids":["https://openalex.org/I130438778"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":1.4945,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.83984409,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"67","last_page":"78"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9951000213623047,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9789000153541565,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/transfer-rna","display_name":"Transfer RNA","score":0.681283175945282},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6364396214485168},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6084061861038208},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.6066290736198425},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.5883097052574158},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.4202047884464264},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.31503093242645264},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3144722580909729},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.19355669617652893},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.15702611207962036}],"concepts":[{"id":"https://openalex.org/C153957851","wikidata":"https://www.wikidata.org/wiki/Q201448","display_name":"Transfer RNA","level":4,"score":0.681283175945282},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6364396214485168},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6084061861038208},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.6066290736198425},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5883097052574158},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.4202047884464264},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.31503093242645264},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3144722580909729},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.19355669617652893},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.15702611207962036},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-031-20837-9_6","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-20837-9_6","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger","score":0.550000011920929}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W1822105579","https://openalex.org/W1969480602","https://openalex.org/W2082124641","https://openalex.org/W2083710504","https://openalex.org/W2085534636","https://openalex.org/W2096959582","https://openalex.org/W2102619694","https://openalex.org/W2109295007","https://openalex.org/W2139304431","https://openalex.org/W2151007096","https://openalex.org/W2215199585","https://openalex.org/W2342249984","https://openalex.org/W2343865724","https://openalex.org/W2397790962","https://openalex.org/W2601547100","https://openalex.org/W2604261407","https://openalex.org/W2783517692","https://openalex.org/W2821433317","https://openalex.org/W2900007277","https://openalex.org/W2906416051","https://openalex.org/W3035965352","https://openalex.org/W3093794060","https://openalex.org/W3099878876","https://openalex.org/W3214710775","https://openalex.org/W6675354045"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2040216736","https://openalex.org/W1998434095","https://openalex.org/W4312203868","https://openalex.org/W2069013776","https://openalex.org/W1979806605","https://openalex.org/W2075273261","https://openalex.org/W2038264393","https://openalex.org/W2059637021","https://openalex.org/W2939643004"],"abstract_inverted_index":null,"counts_by_year":[{"year":2024,"cited_by_count":3}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
