{"id":"https://openalex.org/W4312788309","doi":"https://doi.org/10.1007/978-3-031-17531-2_11","title":"Clustering SARS-CoV-2 Variants from\u00a0Raw High-Throughput Sequencing Reads Data","display_name":"Clustering SARS-CoV-2 Variants from\u00a0Raw High-Throughput Sequencing Reads Data","publication_year":2022,"publication_date":"2022-01-01","ids":{"openalex":"https://openalex.org/W4312788309","doi":"https://doi.org/10.1007/978-3-031-17531-2_11"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-031-17531-2_11","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-17531-2_11","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5017366862","display_name":"Prakash Chourasia","orcid":"https://orcid.org/0000-0002-1443-2192"},"institutions":[{"id":"https://openalex.org/I181565077","display_name":"Georgia State University","ror":"https://ror.org/03qt6ba18","country_code":"US","type":"education","lineage":["https://openalex.org/I181565077"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Prakash Chourasia","raw_affiliation_strings":["Georgia State University, Atlanta, GA, 30303, USA"],"raw_orcid":"https://orcid.org/0000-0002-1443-2192","affiliations":[{"raw_affiliation_string":"Georgia State University, Atlanta, GA, 30303, USA","institution_ids":["https://openalex.org/I181565077"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064858842","display_name":"Sarwan Ali","orcid":"https://orcid.org/0000-0001-8121-2168"},"institutions":[{"id":"https://openalex.org/I181565077","display_name":"Georgia State University","ror":"https://ror.org/03qt6ba18","country_code":"US","type":"education","lineage":["https://openalex.org/I181565077"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sarwan Ali","raw_affiliation_strings":["Georgia State University, Atlanta, GA, 30303, USA"],"raw_orcid":"https://orcid.org/0000-0001-8121-2168","affiliations":[{"raw_affiliation_string":"Georgia State University, Atlanta, GA, 30303, USA","institution_ids":["https://openalex.org/I181565077"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048411377","display_name":"Simone Ciccolella","orcid":"https://orcid.org/0000-0002-6469-4887"},"institutions":[{"id":"https://openalex.org/I66752286","display_name":"University of Milano-Bicocca","ror":"https://ror.org/01ynf4891","country_code":"IT","type":"education","lineage":["https://openalex.org/I66752286"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Simone Ciccolella","raw_affiliation_strings":["University of Milano-Bicocca, Milan, Italy"],"raw_orcid":"https://orcid.org/0000-0002-6469-4887","affiliations":[{"raw_affiliation_string":"University of Milano-Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059679442","display_name":"Gianluca Della Vedova","orcid":"https://orcid.org/0000-0001-5584-3089"},"institutions":[{"id":"https://openalex.org/I66752286","display_name":"University of Milano-Bicocca","ror":"https://ror.org/01ynf4891","country_code":"IT","type":"education","lineage":["https://openalex.org/I66752286"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Gianluca Della Vedova","raw_affiliation_strings":["University of Milano-Bicocca, Milan, Italy"],"raw_orcid":"https://orcid.org/0000-0001-5584-3089","affiliations":[{"raw_affiliation_string":"University of Milano-Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5026228482","display_name":"Murray Patterson","orcid":"https://orcid.org/0000-0002-4329-0234"},"institutions":[{"id":"https://openalex.org/I181565077","display_name":"Georgia State University","ror":"https://ror.org/03qt6ba18","country_code":"US","type":"education","lineage":["https://openalex.org/I181565077"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Murray Patterson","raw_affiliation_strings":["Georgia State University, Atlanta, GA, 30303, USA"],"raw_orcid":"https://orcid.org/0000-0002-4329-0234","affiliations":[{"raw_affiliation_string":"Georgia State University, Atlanta, GA, 30303, USA","institution_ids":["https://openalex.org/I181565077"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5026228482"],"corresponding_institution_ids":["https://openalex.org/I181565077"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":26.6834,"has_fulltext":false,"cited_by_count":10,"citation_normalized_percentile":{"value":0.99717248,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"133","last_page":"148"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10118","display_name":"SARS-CoV-2 and COVID-19 Research","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10118","display_name":"SARS-CoV-2 and COVID-19 Research","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9896000027656555,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.98089998960495,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/bottleneck","display_name":"Bottleneck","score":0.7988514304161072},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.761077880859375},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.7070654630661011},{"id":"https://openalex.org/keywords/embedding","display_name":"Embedding","score":0.5059861540794373},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4803939461708069},{"id":"https://openalex.org/keywords/raw-data","display_name":"Raw data","score":0.4782085418701172},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.44488459825515747},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2867499589920044}],"concepts":[{"id":"https://openalex.org/C2780513914","wikidata":"https://www.wikidata.org/wiki/Q18210350","display_name":"Bottleneck","level":2,"score":0.7988514304161072},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.761077880859375},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.7070654630661011},{"id":"https://openalex.org/C41608201","wikidata":"https://www.wikidata.org/wiki/Q980509","display_name":"Embedding","level":2,"score":0.5059861540794373},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4803939461708069},{"id":"https://openalex.org/C132964779","wikidata":"https://www.wikidata.org/wiki/Q2110223","display_name":"Raw data","level":2,"score":0.4782085418701172},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.44488459825515747},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2867499589920044},{"id":"https://openalex.org/C149635348","wikidata":"https://www.wikidata.org/wiki/Q193040","display_name":"Embedded system","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-031-17531-2_11","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-17531-2_11","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:boa.unimib.it:10281/400922","is_oa":false,"landing_page_url":"https://hdl.handle.net/10281/400922","pdf_url":null,"source":{"id":"https://openalex.org/S4306401259","display_name":"BOA (University of Milano-Bicocca)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I66752286","host_organization_name":"University of Milano-Bicocca","host_organization_lineage":["https://openalex.org/I66752286"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/conferenceObject"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.8299999833106995}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":46,"referenced_works":["https://openalex.org/W1529026127","https://openalex.org/W1574447377","https://openalex.org/W1971100822","https://openalex.org/W1987971958","https://openalex.org/W2030644393","https://openalex.org/W2036780345","https://openalex.org/W2051224630","https://openalex.org/W2085487226","https://openalex.org/W2097749765","https://openalex.org/W2104846587","https://openalex.org/W2121984048","https://openalex.org/W2144560237","https://openalex.org/W2149230623","https://openalex.org/W2150593711","https://openalex.org/W2159954944","https://openalex.org/W2515836512","https://openalex.org/W2950815005","https://openalex.org/W2952045272","https://openalex.org/W2997636468","https://openalex.org/W2997987931","https://openalex.org/W2999010333","https://openalex.org/W3005235420","https://openalex.org/W3009335299","https://openalex.org/W3043124965","https://openalex.org/W3083490151","https://openalex.org/W3085065390","https://openalex.org/W3087224093","https://openalex.org/W3098754359","https://openalex.org/W3114206215","https://openalex.org/W3119321472","https://openalex.org/W3121365103","https://openalex.org/W3126641925","https://openalex.org/W3131055609","https://openalex.org/W3164973676","https://openalex.org/W3180301457","https://openalex.org/W3196141744","https://openalex.org/W3198971816","https://openalex.org/W3207849004","https://openalex.org/W3209047475","https://openalex.org/W3216778212","https://openalex.org/W3217347027","https://openalex.org/W4210644165","https://openalex.org/W4220693339","https://openalex.org/W4235169531","https://openalex.org/W4253260758","https://openalex.org/W6675354045"],"related_works":["https://openalex.org/W2440691801","https://openalex.org/W2381356463","https://openalex.org/W2357461155","https://openalex.org/W2912933387","https://openalex.org/W2997669297","https://openalex.org/W4249931853","https://openalex.org/W4246510521","https://openalex.org/W2728991141","https://openalex.org/W3192150692","https://openalex.org/W3001236632"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":8},{"year":2022,"cited_by_count":1}],"updated_date":"2026-08-04T08:18:43.703281","created_date":"2025-10-10T00:00:00"}
