{"id":"https://openalex.org/W3199187093","doi":"https://doi.org/10.1007/978-3-031-11203-4_18","title":"Identifying Partial Mouse Brain Microscopy Images from\u00a0the\u00a0Allen Reference Atlas Using a\u00a0Contrastively Learned Semantic Space","display_name":"Identifying Partial Mouse Brain Microscopy Images from\u00a0the\u00a0Allen Reference Atlas Using a\u00a0Contrastively Learned Semantic Space","publication_year":2022,"publication_date":"2022-01-01","ids":{"openalex":"https://openalex.org/W3199187093","doi":"https://doi.org/10.1007/978-3-031-11203-4_18","mag":"3199187093"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-031-11203-4_18","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-11203-4_18","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["arxiv","crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2109.06662","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5056342711","display_name":"Justinas Antanavicius","orcid":null},"institutions":[{"id":"https://openalex.org/I124055696","display_name":"University of Copenhagen","ror":"https://ror.org/035b05819","country_code":"DK","type":"education","lineage":["https://openalex.org/I124055696"]}],"countries":["DK"],"is_corresponding":true,"raw_author_name":"Justinas Antanavicius","raw_affiliation_strings":["Department of Computer Science, University of Copenhagen, Copenhagen, Denmark"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Copenhagen, Copenhagen, Denmark","institution_ids":["https://openalex.org/I124055696"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051574516","display_name":"Roberto Leiras","orcid":"https://orcid.org/0000-0001-7232-2904"},"institutions":[{"id":"https://openalex.org/I124055696","display_name":"University of Copenhagen","ror":"https://ror.org/035b05819","country_code":"DK","type":"education","lineage":["https://openalex.org/I124055696"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Roberto Leiras","raw_affiliation_strings":["Department of Neuroscience, University of Copenhagen, Copenhagen, Denmark"],"affiliations":[{"raw_affiliation_string":"Department of Neuroscience, University of Copenhagen, Copenhagen, Denmark","institution_ids":["https://openalex.org/I124055696"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5063821969","display_name":"Raghavendra Selvan","orcid":"https://orcid.org/0000-0003-4302-0207"},"institutions":[{"id":"https://openalex.org/I124055696","display_name":"University of Copenhagen","ror":"https://ror.org/035b05819","country_code":"DK","type":"education","lineage":["https://openalex.org/I124055696"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Raghavendra Selvan","raw_affiliation_strings":["Department of Computer Science, University of Copenhagen, Copenhagen, Denmark","Department of Neuroscience, University of Copenhagen, Copenhagen, Denmark"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Copenhagen, Copenhagen, Denmark","institution_ids":["https://openalex.org/I124055696"]},{"raw_affiliation_string":"Department of Neuroscience, University of Copenhagen, Copenhagen, Denmark","institution_ids":["https://openalex.org/I124055696"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5056342711"],"corresponding_institution_ids":["https://openalex.org/I124055696"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.00355182,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"166","last_page":"176"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10824","display_name":"Image Retrieval and Classification Techniques","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10824","display_name":"Image Retrieval and Classification Techniques","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9955000281333923,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.714160680770874},{"id":"https://openalex.org/keywords/atlas","display_name":"Atlas (anatomy)","score":0.691689133644104},{"id":"https://openalex.org/keywords/brain-atlas","display_name":"Brain atlas","score":0.6844038963317871},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.49826812744140625},{"id":"https://openalex.org/keywords/space","display_name":"Space (punctuation)","score":0.4450412094593048},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics (images)","score":0.4116196036338806},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.34222540259361267},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.3415676951408386},{"id":"https://openalex.org/keywords/cartography","display_name":"Cartography","score":0.3292074203491211},{"id":"https://openalex.org/keywords/anatomy","display_name":"Anatomy","score":0.08952662348747253},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.07017424702644348},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.058315813541412354}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.714160680770874},{"id":"https://openalex.org/C2776673561","wikidata":"https://www.wikidata.org/wiki/Q655357","display_name":"Atlas (anatomy)","level":2,"score":0.691689133644104},{"id":"https://openalex.org/C2780972224","wikidata":"https://www.wikidata.org/wiki/Q17047956","display_name":"Brain atlas","level":2,"score":0.6844038963317871},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.49826812744140625},{"id":"https://openalex.org/C2778572836","wikidata":"https://www.wikidata.org/wiki/Q380933","display_name":"Space (punctuation)","level":2,"score":0.4450412094593048},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.4116196036338806},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.34222540259361267},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.3415676951408386},{"id":"https://openalex.org/C58640448","wikidata":"https://www.wikidata.org/wiki/Q42515","display_name":"Cartography","level":1,"score":0.3292074203491211},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.08952662348747253},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.07017424702644348},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.058315813541412354},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/978-3-031-11203-4_18","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-11203-4_18","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:arXiv.org:2109.06662","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2109.06662","pdf_url":"https://arxiv.org/pdf/2109.06662","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/4d5348d3-42de-4bc3-a638-e83a7c527fff","is_oa":true,"landing_page_url":"https://researchprofiles.ku.dk/da/publications/4d5348d3-42de-4bc3-a638-e83a7c527fff","pdf_url":null,"source":{"id":"https://openalex.org/S4306401983","display_name":"Research at the University of Copenhagen (University of Copenhagen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I124055696","host_organization_name":"University of Copenhagen","host_organization_lineage":["https://openalex.org/I124055696"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Antanavicius , J , Leiras , R & Selvan , R 2022 , Identifying Partial Mouse Brain Microscopy Images from\u00a0the\u00a0Allen Reference Atlas Using a\u00a0Contrastively Learned Semantic Space . in A Hering , J Schnabel , M Zhang , E Ferrante , M Heinrich & D Rueckert (eds) , Biomedical Image Registration - 10th International Workshop, WBIR 2022, Proceedings . 1 edn , Springer Science and Business Media Deutschland GmbH , Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) , vol. 13386 LNCS , pp. 166-176 , 10th International Workshop on Biomedical Image Registration, WBIR 2020 , Munich , Germany , 10/07/2022 . https://doi.org/10.1007/978-3-031-11203-4_18","raw_type":"contributionToPeriodical"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2109.06662","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2109.06662","pdf_url":"https://arxiv.org/pdf/2109.06662","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},"sustainable_development_goals":[{"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4","score":0.49000000953674316}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":20,"referenced_works":["https://openalex.org/W1522301498","https://openalex.org/W2096733369","https://openalex.org/W2113180829","https://openalex.org/W2123491442","https://openalex.org/W2127589108","https://openalex.org/W2133287637","https://openalex.org/W2138621090","https://openalex.org/W2157364932","https://openalex.org/W2194775991","https://openalex.org/W2507987841","https://openalex.org/W2601707599","https://openalex.org/W2773247831","https://openalex.org/W2793622148","https://openalex.org/W2891590469","https://openalex.org/W2905058438","https://openalex.org/W3091905774","https://openalex.org/W3099206234","https://openalex.org/W3100018800","https://openalex.org/W3104164805","https://openalex.org/W4221144909"],"related_works":["https://openalex.org/W3214912135","https://openalex.org/W2951635595","https://openalex.org/W4319337879","https://openalex.org/W2012519212","https://openalex.org/W4249039539","https://openalex.org/W562633612","https://openalex.org/W1523541591","https://openalex.org/W4389549668","https://openalex.org/W4229506690","https://openalex.org/W1988374557"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
