{"id":"https://openalex.org/W4285149659","doi":"https://doi.org/10.1007/978-3-031-09037-0_12","title":"A Framework for\u00a0Registration of\u00a0Multi-modal Spatial Transcriptomics Data","display_name":"A Framework for\u00a0Registration of\u00a0Multi-modal Spatial Transcriptomics Data","publication_year":2022,"publication_date":"2022-01-01","ids":{"openalex":"https://openalex.org/W4285149659","doi":"https://doi.org/10.1007/978-3-031-09037-0_12"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-031-09037-0_12","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-09037-0_12","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5007087474","display_name":"Yu Qiang","orcid":"https://orcid.org/0000-0002-3783-512X"},"institutions":[{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]},{"id":"https://openalex.org/I100135526","display_name":"BGI Group (China)","ror":"https://ror.org/045pn2j94","country_code":"CN","type":"company","lineage":["https://openalex.org/I100135526"]}],"countries":["CN","DE"],"is_corresponding":true,"raw_author_name":"Yu Qiang","raw_affiliation_strings":["Heidelberg University, BioQuant, IPMB, and DKFZ Heidelberg, Biomedical Computer Vision Group, INF 267, 69120, Heidelberg, Germany","MGI, BGI-Shenzhen, Shenzhen, 518083, China"],"affiliations":[{"raw_affiliation_string":"Heidelberg University, BioQuant, IPMB, and DKFZ Heidelberg, Biomedical Computer Vision Group, INF 267, 69120, Heidelberg, Germany","institution_ids":["https://openalex.org/I223822909"]},{"raw_affiliation_string":"MGI, BGI-Shenzhen, Shenzhen, 518083, China","institution_ids":["https://openalex.org/I100135526"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103102516","display_name":"Shixu He","orcid":"https://orcid.org/0000-0001-8890-0844"},"institutions":[{"id":"https://openalex.org/I100135526","display_name":"BGI Group (China)","ror":"https://ror.org/045pn2j94","country_code":"CN","type":"company","lineage":["https://openalex.org/I100135526"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shixu He","raw_affiliation_strings":["MGI, BGI-Shenzhen, Shenzhen, 518083, China"],"affiliations":[{"raw_affiliation_string":"MGI, BGI-Shenzhen, Shenzhen, 518083, China","institution_ids":["https://openalex.org/I100135526"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019158197","display_name":"Renpeng Ding","orcid":"https://orcid.org/0009-0005-1938-9196"},"institutions":[{"id":"https://openalex.org/I100135526","display_name":"BGI Group (China)","ror":"https://ror.org/045pn2j94","country_code":"CN","type":"company","lineage":["https://openalex.org/I100135526"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Renpeng Ding","raw_affiliation_strings":["MGI, BGI-Shenzhen, Shenzhen, 518083, China"],"affiliations":[{"raw_affiliation_string":"MGI, BGI-Shenzhen, Shenzhen, 518083, China","institution_ids":["https://openalex.org/I100135526"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078745386","display_name":"Kailong Ma","orcid":null},"institutions":[{"id":"https://openalex.org/I100135526","display_name":"BGI Group (China)","ror":"https://ror.org/045pn2j94","country_code":"CN","type":"company","lineage":["https://openalex.org/I100135526"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Kailong Ma","raw_affiliation_strings":["MGI, BGI-Shenzhen, Shenzhen, 518083, China"],"affiliations":[{"raw_affiliation_string":"MGI, BGI-Shenzhen, Shenzhen, 518083, China","institution_ids":["https://openalex.org/I100135526"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062059924","display_name":"Yong Hou","orcid":"https://orcid.org/0000-0002-0420-0726"},"institutions":[{"id":"https://openalex.org/I100135526","display_name":"BGI Group (China)","ror":"https://ror.org/045pn2j94","country_code":"CN","type":"company","lineage":["https://openalex.org/I100135526"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yong Hou","raw_affiliation_strings":["MGI, BGI-Shenzhen, Shenzhen, 518083, China"],"affiliations":[{"raw_affiliation_string":"MGI, BGI-Shenzhen, Shenzhen, 518083, China","institution_ids":["https://openalex.org/I100135526"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101601139","display_name":"Yan Zhou","orcid":"https://orcid.org/0000-0003-4010-339X"},"institutions":[{"id":"https://openalex.org/I100135526","display_name":"BGI Group (China)","ror":"https://ror.org/045pn2j94","country_code":"CN","type":"company","lineage":["https://openalex.org/I100135526"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yan Zhou","raw_affiliation_strings":["MGI, BGI-Shenzhen, Shenzhen, 518083, China"],"affiliations":[{"raw_affiliation_string":"MGI, BGI-Shenzhen, Shenzhen, 518083, China","institution_ids":["https://openalex.org/I100135526"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5105166471","display_name":"Karl Rohr","orcid":null},"institutions":[{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Karl Rohr","raw_affiliation_strings":["Heidelberg University, BioQuant, IPMB, and DKFZ Heidelberg, Biomedical Computer Vision Group, INF 267, 69120, Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"Heidelberg University, BioQuant, IPMB, and DKFZ Heidelberg, Biomedical Computer Vision Group, INF 267, 69120, Heidelberg, Germany","institution_ids":["https://openalex.org/I223822909"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5007087474"],"corresponding_institution_ids":["https://openalex.org/I100135526","https://openalex.org/I223822909"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.1512343,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"134","last_page":"145"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9940999746322632,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11313","display_name":"Immune cells in cancer","score":0.9754999876022339,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7552745938301086},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.6231050491333008},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6197477579116821},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.5929580330848694},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.5199743509292603},{"id":"https://openalex.org/keywords/immunostaining","display_name":"Immunostaining","score":0.4960401952266693},{"id":"https://openalex.org/keywords/modal","display_name":"Modal","score":0.4705239534378052},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.4662315845489502},{"id":"https://openalex.org/keywords/image-processing","display_name":"Image processing","score":0.45036977529525757},{"id":"https://openalex.org/keywords/image-registration","display_name":"Image registration","score":0.42663440108299255},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.16822746396064758},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.1681441068649292},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.08817335963249207}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7552745938301086},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.6231050491333008},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6197477579116821},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.5929580330848694},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.5199743509292603},{"id":"https://openalex.org/C4224716","wikidata":"https://www.wikidata.org/wiki/Q10859258","display_name":"Immunostaining","level":3,"score":0.4960401952266693},{"id":"https://openalex.org/C71139939","wikidata":"https://www.wikidata.org/wiki/Q910194","display_name":"Modal","level":2,"score":0.4705239534378052},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.4662315845489502},{"id":"https://openalex.org/C9417928","wikidata":"https://www.wikidata.org/wiki/Q1070689","display_name":"Image processing","level":3,"score":0.45036977529525757},{"id":"https://openalex.org/C166704113","wikidata":"https://www.wikidata.org/wiki/Q861092","display_name":"Image registration","level":3,"score":0.42663440108299255},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.16822746396064758},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1681441068649292},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.08817335963249207},{"id":"https://openalex.org/C204232928","wikidata":"https://www.wikidata.org/wiki/Q899285","display_name":"Immunohistochemistry","level":2,"score":0.0},{"id":"https://openalex.org/C188027245","wikidata":"https://www.wikidata.org/wiki/Q750446","display_name":"Polymer chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-031-09037-0_12","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-09037-0_12","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":14,"referenced_works":["https://openalex.org/W161707881","https://openalex.org/W2036290398","https://openalex.org/W2066234723","https://openalex.org/W2134236847","https://openalex.org/W2143623375","https://openalex.org/W2499411512","https://openalex.org/W2670707886","https://openalex.org/W2910928142","https://openalex.org/W2999345636","https://openalex.org/W3037921274","https://openalex.org/W3044030235","https://openalex.org/W3121491376","https://openalex.org/W3167327839","https://openalex.org/W3190202966"],"related_works":["https://openalex.org/W2924722371","https://openalex.org/W2001495175","https://openalex.org/W2057390952","https://openalex.org/W4249287024","https://openalex.org/W4232041577","https://openalex.org/W1988931642","https://openalex.org/W3144672929","https://openalex.org/W2399513595","https://openalex.org/W2394972899","https://openalex.org/W1981949783"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
