{"id":"https://openalex.org/W4285268031","doi":"https://doi.org/10.1007/978-3-031-07802-6_5","title":"Comparative Study of Synthetic Bulk RNA-Seq Generators","display_name":"Comparative Study of Synthetic Bulk RNA-Seq Generators","publication_year":2022,"publication_date":"2022-01-01","ids":{"openalex":"https://openalex.org/W4285268031","doi":"https://doi.org/10.1007/978-3-031-07802-6_5"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-031-07802-6_5","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-07802-6_5","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5006664134","display_name":"Felitsiya Shakola","orcid":"https://orcid.org/0000-0003-0537-2404"},"institutions":[{"id":"https://openalex.org/I58918642","display_name":"Sofia University \"St. Kliment Ohridski\"","ror":"https://ror.org/02jv3k292","country_code":"BG","type":"education","lineage":["https://openalex.org/I58918642"]}],"countries":["BG"],"is_corresponding":true,"raw_author_name":"Felitsiya Shakola","raw_affiliation_strings":["GATE Institute, Sofia University, 125 Tsarigradsko Shosse, Bl. 2, 1113, Sofia, Bulgaria"],"affiliations":[{"raw_affiliation_string":"GATE Institute, Sofia University, 125 Tsarigradsko Shosse, Bl. 2, 1113, Sofia, Bulgaria","institution_ids":["https://openalex.org/I58918642"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077056347","display_name":"Dean Palejev","orcid":"https://orcid.org/0000-0002-0563-6636"},"institutions":[{"id":"https://openalex.org/I4210105926","display_name":"Institute of Mathematics and Informatics","ror":"https://ror.org/01b5dy719","country_code":"BG","type":"facility","lineage":["https://openalex.org/I24768866","https://openalex.org/I4210105926"]},{"id":"https://openalex.org/I58918642","display_name":"Sofia University \"St. Kliment Ohridski\"","ror":"https://ror.org/02jv3k292","country_code":"BG","type":"education","lineage":["https://openalex.org/I58918642"]},{"id":"https://openalex.org/I24768866","display_name":"Bulgarian Academy of Sciences","ror":"https://ror.org/01x8hew03","country_code":"BG","type":"funder","lineage":["https://openalex.org/I24768866"]}],"countries":["BG"],"is_corresponding":false,"raw_author_name":"Dean Palejev","raw_affiliation_strings":["GATE Institute, Sofia University, 125 Tsarigradsko Shosse, Bl. 2, 1113, Sofia, Bulgaria","Institute of Mathematics and Informatics, Bulgarian Academy of Sciences, Acad. G. Bonchev St., Bl. 8, 1113, Sofia, Bulgaria"],"affiliations":[{"raw_affiliation_string":"GATE Institute, Sofia University, 125 Tsarigradsko Shosse, Bl. 2, 1113, Sofia, Bulgaria","institution_ids":["https://openalex.org/I58918642"]},{"raw_affiliation_string":"Institute of Mathematics and Informatics, Bulgarian Academy of Sciences, Acad. G. Bonchev St., Bl. 8, 1113, Sofia, Bulgaria","institution_ids":["https://openalex.org/I24768866","https://openalex.org/I4210105926"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5079620688","display_name":"Ivan Ivanov","orcid":"https://orcid.org/0000-0002-5323-8325"},"institutions":[{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ivan Ivanov","raw_affiliation_strings":["Department of Veterinary Physiology and Pharmacology, Texas A&M University, College Station, Texas, 77843, USA"],"affiliations":[{"raw_affiliation_string":"Department of Veterinary Physiology and Pharmacology, Texas A&M University, College Station, Texas, 77843, USA","institution_ids":["https://openalex.org/I91045830"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5006664134"],"corresponding_institution_ids":["https://openalex.org/I58918642"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":1.027,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.81142857,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"57","last_page":"70"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9937999844551086,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9932000041007996,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/synthetic-data","display_name":"Synthetic data","score":0.7161176204681396},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6635339856147766},{"id":"https://openalex.org/keywords/closeness","display_name":"Closeness","score":0.6061064600944519},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5718140006065369},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5151532888412476},{"id":"https://openalex.org/keywords/parametric-statistics","display_name":"Parametric statistics","score":0.5055959224700928},{"id":"https://openalex.org/keywords/nonparametric-statistics","display_name":"Nonparametric statistics","score":0.4759092926979065},{"id":"https://openalex.org/keywords/rna-seq","display_name":"RNA-Seq","score":0.4607824385166168},{"id":"https://openalex.org/keywords/data-set","display_name":"Data set","score":0.4131168723106384},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3483062982559204},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.33494603633880615},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1549927294254303},{"id":"https://openalex.org/keywords/econometrics","display_name":"Econometrics","score":0.08369910717010498},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.07485565543174744}],"concepts":[{"id":"https://openalex.org/C160920958","wikidata":"https://www.wikidata.org/wiki/Q7662746","display_name":"Synthetic data","level":2,"score":0.7161176204681396},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6635339856147766},{"id":"https://openalex.org/C2779545769","wikidata":"https://www.wikidata.org/wiki/Q5135364","display_name":"Closeness","level":2,"score":0.6061064600944519},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5718140006065369},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5151532888412476},{"id":"https://openalex.org/C117251300","wikidata":"https://www.wikidata.org/wiki/Q1849855","display_name":"Parametric statistics","level":2,"score":0.5055959224700928},{"id":"https://openalex.org/C102366305","wikidata":"https://www.wikidata.org/wiki/Q1097688","display_name":"Nonparametric statistics","level":2,"score":0.4759092926979065},{"id":"https://openalex.org/C107397762","wikidata":"https://www.wikidata.org/wiki/Q2542347","display_name":"RNA-Seq","level":5,"score":0.4607824385166168},{"id":"https://openalex.org/C58489278","wikidata":"https://www.wikidata.org/wiki/Q1172284","display_name":"Data set","level":2,"score":0.4131168723106384},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3483062982559204},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.33494603633880615},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1549927294254303},{"id":"https://openalex.org/C149782125","wikidata":"https://www.wikidata.org/wiki/Q160039","display_name":"Econometrics","level":1,"score":0.08369910717010498},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.07485565543174744},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-031-07802-6_5","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-07802-6_5","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure","score":0.46000000834465027}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":31,"referenced_works":["https://openalex.org/W1981509058","https://openalex.org/W1996968822","https://openalex.org/W2022590976","https://openalex.org/W2027455260","https://openalex.org/W2060842569","https://openalex.org/W2068614693","https://openalex.org/W2093043381","https://openalex.org/W2094815068","https://openalex.org/W2107038793","https://openalex.org/W2121211805","https://openalex.org/W2135256913","https://openalex.org/W2148167644","https://openalex.org/W2162698597","https://openalex.org/W2179438025","https://openalex.org/W2319666323","https://openalex.org/W2531058132","https://openalex.org/W2749493208","https://openalex.org/W2761803678","https://openalex.org/W2886347923","https://openalex.org/W2944627925","https://openalex.org/W2949067670","https://openalex.org/W2949086748","https://openalex.org/W2952027905","https://openalex.org/W2991423641","https://openalex.org/W3007722513","https://openalex.org/W3019556496","https://openalex.org/W3027249069","https://openalex.org/W3039072393","https://openalex.org/W3181282080","https://openalex.org/W3183813740","https://openalex.org/W4301040373"],"related_works":["https://openalex.org/W1995054232","https://openalex.org/W1556709767","https://openalex.org/W1557920161","https://openalex.org/W2156910174","https://openalex.org/W2011510925","https://openalex.org/W1993023208","https://openalex.org/W4291020658","https://openalex.org/W2593813644","https://openalex.org/W1562218326","https://openalex.org/W2061476331"],"abstract_inverted_index":null,"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
