{"id":"https://openalex.org/W4285126148","doi":"https://doi.org/10.1007/978-3-031-07802-6_21","title":"Comparisons of\u00a0Knowledge Graphs and\u00a0Entity Extraction in\u00a0Breast Cancer Subtyping Biomedical Text Analysis","display_name":"Comparisons of\u00a0Knowledge Graphs and\u00a0Entity Extraction in\u00a0Breast Cancer Subtyping Biomedical Text Analysis","publication_year":2022,"publication_date":"2022-01-01","ids":{"openalex":"https://openalex.org/W4285126148","doi":"https://doi.org/10.1007/978-3-031-07802-6_21"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-031-07802-6_21","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-07802-6_21","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5004031300","display_name":"Jean M. Davidson","orcid":"https://orcid.org/0000-0001-5951-5955"},"institutions":[{"id":"https://openalex.org/I149919469","display_name":"California Polytechnic State University","ror":"https://ror.org/001gpfp45","country_code":"US","type":"education","lineage":["https://openalex.org/I149919469"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jean Davidson","raw_affiliation_strings":["Department of Computer Science and Department of Biological Sciences, California Polytechnic State University, San Luis Obispo, San Luis Obispo, CA, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Department of Biological Sciences, California Polytechnic State University, San Luis Obispo, San Luis Obispo, CA, USA","institution_ids":["https://openalex.org/I149919469"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082018485","display_name":"Grif Hawblitzel","orcid":null},"institutions":[{"id":"https://openalex.org/I149919469","display_name":"California Polytechnic State University","ror":"https://ror.org/001gpfp45","country_code":"US","type":"education","lineage":["https://openalex.org/I149919469"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Grif Hawblitzel","raw_affiliation_strings":["Department of Computer Science and Department of Biological Sciences, California Polytechnic State University, San Luis Obispo, San Luis Obispo, CA, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Department of Biological Sciences, California Polytechnic State University, San Luis Obispo, San Luis Obispo, CA, USA","institution_ids":["https://openalex.org/I149919469"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005174520","display_name":"McClain Kressman","orcid":"https://orcid.org/0000-0002-1679-8606"},"institutions":[{"id":"https://openalex.org/I149919469","display_name":"California Polytechnic State University","ror":"https://ror.org/001gpfp45","country_code":"US","type":"education","lineage":["https://openalex.org/I149919469"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"McClain Kressman","raw_affiliation_strings":["Department of Computer Science and Department of Biological Sciences, California Polytechnic State University, San Luis Obispo, San Luis Obispo, CA, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Department of Biological Sciences, California Polytechnic State University, San Luis Obispo, San Luis Obispo, CA, USA","institution_ids":["https://openalex.org/I149919469"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056632320","display_name":"Andrew Doud","orcid":null},"institutions":[{"id":"https://openalex.org/I149919469","display_name":"California Polytechnic State University","ror":"https://ror.org/001gpfp45","country_code":"US","type":"education","lineage":["https://openalex.org/I149919469"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andrew Doud","raw_affiliation_strings":["Department of Computer Science and Department of Biological Sciences, California Polytechnic State University, San Luis Obispo, San Luis Obispo, CA, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Department of Biological Sciences, California Polytechnic State University, San Luis Obispo, San Luis Obispo, CA, USA","institution_ids":["https://openalex.org/I149919469"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044622939","display_name":"Harsha Lakshmankumar","orcid":null},"institutions":[{"id":"https://openalex.org/I149919469","display_name":"California Polytechnic State University","ror":"https://ror.org/001gpfp45","country_code":"US","type":"education","lineage":["https://openalex.org/I149919469"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Harsha Lakshmankumar","raw_affiliation_strings":["Department of Computer Science and Department of Biological Sciences, California Polytechnic State University, San Luis Obispo, San Luis Obispo, CA, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Department of Biological Sciences, California Polytechnic State University, San Luis Obispo, San Luis Obispo, CA, USA","institution_ids":["https://openalex.org/I149919469"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103607728","display_name":"Ella Thomas","orcid":null},"institutions":[{"id":"https://openalex.org/I149919469","display_name":"California Polytechnic State University","ror":"https://ror.org/001gpfp45","country_code":"US","type":"education","lineage":["https://openalex.org/I149919469"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ella Thomas","raw_affiliation_strings":["Department of Computer Science and Department of Biological Sciences, California Polytechnic State University, San Luis Obispo, San Luis Obispo, CA, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Department of Biological Sciences, California Polytechnic State University, San Luis Obispo, San Luis Obispo, CA, USA","institution_ids":["https://openalex.org/I149919469"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100763846","display_name":"Paul Kim","orcid":"https://orcid.org/0000-0002-1755-6182"},"institutions":[{"id":"https://openalex.org/I149919469","display_name":"California Polytechnic State University","ror":"https://ror.org/001gpfp45","country_code":"US","type":"education","lineage":["https://openalex.org/I149919469"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Paul Kim","raw_affiliation_strings":["Department of Computer Science and Department of Biological Sciences, California Polytechnic State University, San Luis Obispo, San Luis Obispo, CA, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Department of Biological Sciences, California Polytechnic State University, San Luis Obispo, San Luis Obispo, CA, USA","institution_ids":["https://openalex.org/I149919469"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067518897","display_name":"Ava Jakusovszky","orcid":null},"institutions":[{"id":"https://openalex.org/I149919469","display_name":"California Polytechnic State University","ror":"https://ror.org/001gpfp45","country_code":"US","type":"education","lineage":["https://openalex.org/I149919469"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ava Jakusovszky","raw_affiliation_strings":["Department of Computer Science and Department of Biological Sciences, California Polytechnic State University, San Luis Obispo, San Luis Obispo, CA, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Department of Biological Sciences, California Polytechnic State University, San Luis Obispo, San Luis Obispo, CA, USA","institution_ids":["https://openalex.org/I149919469"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5007961778","display_name":"Paul Anderson","orcid":"https://orcid.org/0000-0002-8408-3944"},"institutions":[{"id":"https://openalex.org/I149919469","display_name":"California Polytechnic State University","ror":"https://ror.org/001gpfp45","country_code":"US","type":"education","lineage":["https://openalex.org/I149919469"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Paul Anderson","raw_affiliation_strings":["Department of Computer Science and Department of Biological Sciences, California Polytechnic State University, San Luis Obispo, San Luis Obispo, CA, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Department of Biological Sciences, California Polytechnic State University, San Luis Obispo, San Luis Obispo, CA, USA","institution_ids":["https://openalex.org/I149919469"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5004031300"],"corresponding_institution_ids":["https://openalex.org/I149919469"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.14439151,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"249","last_page":"259"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9830999970436096,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9603000283241272,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/subtyping","display_name":"Subtyping","score":0.9004525542259216},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5476812124252319},{"id":"https://openalex.org/keywords/breast-cancer","display_name":"Breast cancer","score":0.46604835987091064},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3259429931640625},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.2685126066207886},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.22315430641174316},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.20669743418693542},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.1370719075202942},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.12271884083747864}],"concepts":[{"id":"https://openalex.org/C83852419","wikidata":"https://www.wikidata.org/wiki/Q2713292","display_name":"Subtyping","level":2,"score":0.9004525542259216},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5476812124252319},{"id":"https://openalex.org/C530470458","wikidata":"https://www.wikidata.org/wiki/Q128581","display_name":"Breast cancer","level":3,"score":0.46604835987091064},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3259429931640625},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.2685126066207886},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.22315430641174316},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.20669743418693542},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.1370719075202942},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.12271884083747864}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-031-07802-6_21","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-07802-6_21","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W1991734968","https://openalex.org/W2003412927","https://openalex.org/W2005895632","https://openalex.org/W2058198205","https://openalex.org/W2066353069","https://openalex.org/W2067287567","https://openalex.org/W2082326948","https://openalex.org/W2096283457","https://openalex.org/W2109779908","https://openalex.org/W2111568097","https://openalex.org/W2119434445","https://openalex.org/W2126563020","https://openalex.org/W2148638517","https://openalex.org/W2153565541","https://openalex.org/W2309067861","https://openalex.org/W2524949478","https://openalex.org/W2915623326","https://openalex.org/W2971796232","https://openalex.org/W3016218187","https://openalex.org/W3033896008","https://openalex.org/W3106224367","https://openalex.org/W3128646645","https://openalex.org/W3207569082","https://openalex.org/W4221142212","https://openalex.org/W4242369950"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2396009657","https://openalex.org/W2799110842","https://openalex.org/W3032826521","https://openalex.org/W2391332606","https://openalex.org/W1462775415","https://openalex.org/W4229853287","https://openalex.org/W1987896487","https://openalex.org/W2008549446","https://openalex.org/W1535483699"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
