{"id":"https://openalex.org/W4285251095","doi":"https://doi.org/10.1007/978-3-031-06220-9_14","title":"Using Computational Synthetic Biology Tools to Modulate Gene Expression Within a Microbiome","display_name":"Using Computational Synthetic Biology Tools to Modulate Gene Expression Within a Microbiome","publication_year":2022,"publication_date":"2022-01-01","ids":{"openalex":"https://openalex.org/W4285251095","doi":"https://doi.org/10.1007/978-3-031-06220-9_14"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-031-06220-9_14","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-06220-9_14","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5078619948","display_name":"Liyam Chitayat Levi","orcid":null},"institutions":[{"id":"https://openalex.org/I16391192","display_name":"Tel Aviv University","ror":"https://ror.org/04mhzgx49","country_code":"IL","type":"education","lineage":["https://openalex.org/I16391192"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Liyam Chitayat Levi","raw_affiliation_strings":["Department of Biomedical Engineering, Tel-Aviv University, Tel Aviv, Israel"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Tel-Aviv University, Tel Aviv, Israel","institution_ids":["https://openalex.org/I16391192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043326293","display_name":"Ido Rippin","orcid":"https://orcid.org/0000-0003-1651-5036"},"institutions":[{"id":"https://openalex.org/I16391192","display_name":"Tel Aviv University","ror":"https://ror.org/04mhzgx49","country_code":"IL","type":"education","lineage":["https://openalex.org/I16391192"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Ido Rippin","raw_affiliation_strings":["Sackler Faculty of Medicine, Tel-Aviv University, Tel Aviv, Israel"],"affiliations":[{"raw_affiliation_string":"Sackler Faculty of Medicine, Tel-Aviv University, Tel Aviv, Israel","institution_ids":["https://openalex.org/I16391192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024124464","display_name":"Moran Ben Tulila","orcid":"https://orcid.org/0000-0002-1997-4345"},"institutions":[{"id":"https://openalex.org/I16391192","display_name":"Tel Aviv University","ror":"https://ror.org/04mhzgx49","country_code":"IL","type":"education","lineage":["https://openalex.org/I16391192"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Moran Ben Tulila","raw_affiliation_strings":["Department of Biomedical Engineering, Tel-Aviv University, Tel Aviv, Israel"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Tel-Aviv University, Tel Aviv, Israel","institution_ids":["https://openalex.org/I16391192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064322699","display_name":"Rotem Galron","orcid":null},"institutions":[{"id":"https://openalex.org/I16391192","display_name":"Tel Aviv University","ror":"https://ror.org/04mhzgx49","country_code":"IL","type":"education","lineage":["https://openalex.org/I16391192"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Rotem Galron","raw_affiliation_strings":["Department of Biomedical Engineering, Tel-Aviv University, Tel Aviv, Israel"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Tel-Aviv University, Tel Aviv, Israel","institution_ids":["https://openalex.org/I16391192"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5021278923","display_name":"Tamir Tuller","orcid":"https://orcid.org/0000-0003-4194-7068"},"institutions":[{"id":"https://openalex.org/I16391192","display_name":"Tel Aviv University","ror":"https://ror.org/04mhzgx49","country_code":"IL","type":"education","lineage":["https://openalex.org/I16391192"]}],"countries":["IL"],"is_corresponding":true,"raw_author_name":"Tamir Tuller","raw_affiliation_strings":["Department of Biomedical Engineering, Tel-Aviv University, Tel Aviv, Israel","The Sagol School of Neuroscience, Tel-Aviv University, Tel Aviv, Israel"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Tel-Aviv University, Tel Aviv, Israel","institution_ids":["https://openalex.org/I16391192"]},{"raw_affiliation_string":"The Sagol School of Neuroscience, Tel-Aviv University, Tel Aviv, Israel","institution_ids":["https://openalex.org/I16391192"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5021278923"],"corresponding_institution_ids":["https://openalex.org/I16391192"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.17669987,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"235","last_page":"259"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9921000003814697,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":0.9905999898910522,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/microbiome","display_name":"Microbiome","score":0.7082645893096924},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.5627360343933105},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5401114821434021},{"id":"https://openalex.org/keywords/metagenomics","display_name":"Metagenomics","score":0.5223684906959534},{"id":"https://openalex.org/keywords/generalization","display_name":"Generalization","score":0.4999072551727295},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.49628692865371704},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.46753188967704773},{"id":"https://openalex.org/keywords/expression","display_name":"Expression (computer science)","score":0.45904913544654846},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3970935642719269},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3478829860687256},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3238523006439209},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2702856957912445}],"concepts":[{"id":"https://openalex.org/C143121216","wikidata":"https://www.wikidata.org/wiki/Q1330402","display_name":"Microbiome","level":2,"score":0.7082645893096924},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.5627360343933105},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5401114821434021},{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.5223684906959534},{"id":"https://openalex.org/C177148314","wikidata":"https://www.wikidata.org/wiki/Q170084","display_name":"Generalization","level":2,"score":0.4999072551727295},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.49628692865371704},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.46753188967704773},{"id":"https://openalex.org/C90559484","wikidata":"https://www.wikidata.org/wiki/Q778379","display_name":"Expression (computer science)","level":2,"score":0.45904913544654846},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3970935642719269},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3478829860687256},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3238523006439209},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2702856957912445},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-031-06220-9_14","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-06220-9_14","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Life in Land","id":"https://metadata.un.org/sdg/15","score":0.7400000095367432}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":42,"referenced_works":["https://openalex.org/W1558263848","https://openalex.org/W1601118060","https://openalex.org/W1834065866","https://openalex.org/W1977591727","https://openalex.org/W1993235214","https://openalex.org/W2011428499","https://openalex.org/W2018590530","https://openalex.org/W2019604065","https://openalex.org/W2029878856","https://openalex.org/W2032356948","https://openalex.org/W2078380674","https://openalex.org/W2087465592","https://openalex.org/W2087649464","https://openalex.org/W2106420457","https://openalex.org/W2111325483","https://openalex.org/W2113181456","https://openalex.org/W2121166240","https://openalex.org/W2131510173","https://openalex.org/W2132587585","https://openalex.org/W2133620956","https://openalex.org/W2142678478","https://openalex.org/W2147837708","https://openalex.org/W2187467595","https://openalex.org/W2317271409","https://openalex.org/W2335472966","https://openalex.org/W2516509948","https://openalex.org/W2534106100","https://openalex.org/W2581045219","https://openalex.org/W2607347190","https://openalex.org/W2753369155","https://openalex.org/W2909919296","https://openalex.org/W2913871048","https://openalex.org/W2935798331","https://openalex.org/W2952869842","https://openalex.org/W2974481407","https://openalex.org/W2999743866","https://openalex.org/W3015066153","https://openalex.org/W3033378924","https://openalex.org/W3041953549","https://openalex.org/W3139265997","https://openalex.org/W3152698768","https://openalex.org/W3184356459"],"related_works":["https://openalex.org/W638577851","https://openalex.org/W2968354375","https://openalex.org/W2359440920","https://openalex.org/W2889550857","https://openalex.org/W3013372948","https://openalex.org/W3135997498","https://openalex.org/W4242417330","https://openalex.org/W3198631238","https://openalex.org/W4388282505","https://openalex.org/W3139084279"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
