{"id":"https://openalex.org/W4285236475","doi":"https://doi.org/10.1007/978-3-031-04749-7_20","title":"DiffDomain Enables Identification of\u00a0Structurally Reorganized Topologically Associating Domains","display_name":"DiffDomain Enables Identification of\u00a0Structurally Reorganized Topologically Associating Domains","publication_year":2022,"publication_date":"2022-01-01","ids":{"openalex":"https://openalex.org/W4285236475","doi":"https://doi.org/10.1007/978-3-031-04749-7_20"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-031-04749-7_20","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-04749-7_20","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5007533139","display_name":"Dunming Hua","orcid":null},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Dunming Hua","raw_affiliation_strings":["School of Public Health (Shenzhen), Sun Yat-sen University, Shenzhen, 510275, Guangdong, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Public Health (Shenzhen), Sun Yat-sen University, Shenzhen, 510275, Guangdong, China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109673980","display_name":"Ming Gu","orcid":null},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ming Gu","raw_affiliation_strings":["School of Public Health (Shenzhen), Sun Yat-sen University, Shenzhen, 510275, Guangdong, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Public Health (Shenzhen), Sun Yat-sen University, Shenzhen, 510275, Guangdong, China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068660553","display_name":"Yanyi Du","orcid":null},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yanyi Du","raw_affiliation_strings":["School of Public Health (Shenzhen), Sun Yat-sen University, Shenzhen, 510275, Guangdong, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Public Health (Shenzhen), Sun Yat-sen University, Shenzhen, 510275, Guangdong, China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100620864","display_name":"Qi Li","orcid":"https://orcid.org/0000-0003-3746-9876"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Li Qi","raw_affiliation_strings":["Chongqing Municipal Center for Disease Control and Prevention, Chongqing, 400042, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chongqing Municipal Center for Disease Control and Prevention, Chongqing, 400042, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051657705","display_name":"Xiangjun Du","orcid":"https://orcid.org/0000-0001-8184-8430"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiangjun Du","raw_affiliation_strings":["School of Public Health (Shenzhen), Sun Yat-sen University, Shenzhen, 510275, Guangdong, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Public Health (Shenzhen), Sun Yat-sen University, Shenzhen, 510275, Guangdong, China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058289590","display_name":"Zhidong Bai","orcid":"https://orcid.org/0000-0002-5300-5513"},"institutions":[{"id":"https://openalex.org/I184983240","display_name":"Northeast Normal University","ror":"https://ror.org/02rkvz144","country_code":"CN","type":"education","lineage":["https://openalex.org/I184983240"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhidong Bai","raw_affiliation_strings":["KLASMOE and School of Mathematics and Statistics, Northeast Normal University, Changchun, 130024, Jilin, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"KLASMOE and School of Mathematics and Statistics, Northeast Normal University, Changchun, 130024, Jilin, China","institution_ids":["https://openalex.org/I184983240"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038128649","display_name":"Xiaopeng Zhu","orcid":"https://orcid.org/0000-0003-2007-9820"},"institutions":[{"id":"https://openalex.org/I74973139","display_name":"Carnegie Mellon University","ror":"https://ror.org/05x2bcf33","country_code":"US","type":"education","lineage":["https://openalex.org/I74973139"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xiaopeng Zhu","raw_affiliation_strings":["Computational Biology Department, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA, 15213, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Biology Department, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA, 15213, USA","institution_ids":["https://openalex.org/I74973139"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5015927927","display_name":"Dechao Tian","orcid":"https://orcid.org/0000-0001-9281-1633"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Dechao Tian","raw_affiliation_strings":["School of Public Health (Shenzhen), Sun Yat-sen University, Shenzhen, 510275, Guangdong, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Public Health (Shenzhen), Sun Yat-sen University, Shenzhen, 510275, Guangdong, China","institution_ids":["https://openalex.org/I157773358"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":8,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":1.9973,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.86293586,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"302","last_page":"303"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9824000000953674,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.942300021648407,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/chromatin","display_name":"Chromatin","score":0.782813310623169},{"id":"https://openalex.org/keywords/chromosome-conformation-capture","display_name":"Chromosome conformation capture","score":0.7753151655197144},{"id":"https://openalex.org/keywords/enhancer","display_name":"Enhancer","score":0.7147785425186157},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6870200634002686},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5978500247001648},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.4782941937446594},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.47388333082199097},{"id":"https://openalex.org/keywords/chromosome","display_name":"Chromosome","score":0.45297497510910034},{"id":"https://openalex.org/keywords/evolutionary-biology","display_name":"Evolutionary biology","score":0.4320402443408966},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.39934077858924866},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.19138655066490173},{"id":"https://openalex.org/keywords/transcription-factor","display_name":"Transcription factor","score":0.17837679386138916}],"concepts":[{"id":"https://openalex.org/C83640560","wikidata":"https://www.wikidata.org/wiki/Q180951","display_name":"Chromatin","level":3,"score":0.782813310623169},{"id":"https://openalex.org/C93946551","wikidata":"https://www.wikidata.org/wiki/Q5113914","display_name":"Chromosome conformation capture","level":5,"score":0.7753151655197144},{"id":"https://openalex.org/C111936080","wikidata":"https://www.wikidata.org/wiki/Q913367","display_name":"Enhancer","level":4,"score":0.7147785425186157},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6870200634002686},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5978500247001648},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.4782941937446594},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.47388333082199097},{"id":"https://openalex.org/C30481170","wikidata":"https://www.wikidata.org/wiki/Q37748","display_name":"Chromosome","level":3,"score":0.45297497510910034},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.4320402443408966},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.39934077858924866},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.19138655066490173},{"id":"https://openalex.org/C86339819","wikidata":"https://www.wikidata.org/wiki/Q407384","display_name":"Transcription factor","level":3,"score":0.17837679386138916},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-031-04749-7_20","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-04749-7_20","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-44782-6","is_oa":false,"landing_page_url":"https://www.nature.com/articles/s41467-024-44782-6","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W3195254751","https://openalex.org/W1988056927","https://openalex.org/W2971821708","https://openalex.org/W3116849561","https://openalex.org/W2136004413","https://openalex.org/W3180808842","https://openalex.org/W2111997778","https://openalex.org/W2793253652","https://openalex.org/W2043314233","https://openalex.org/W2065057682"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}