{"id":"https://openalex.org/W4285217451","doi":"https://doi.org/10.1007/978-3-031-04749-7_15","title":"Co-linear Chaining with\u00a0Overlaps and\u00a0Gap Costs","display_name":"Co-linear Chaining with\u00a0Overlaps and\u00a0Gap Costs","publication_year":2022,"publication_date":"2022-01-01","ids":{"openalex":"https://openalex.org/W4285217451","doi":"https://doi.org/10.1007/978-3-031-04749-7_15"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-031-04749-7_15","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-04749-7_15","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5037477391","display_name":"Chirag Jain","orcid":"https://orcid.org/0000-0002-4300-0794"},"institutions":[{"id":"https://openalex.org/I59270414","display_name":"Indian Institute of Science Bangalore","ror":"https://ror.org/04dese585","country_code":"IN","type":"education","lineage":["https://openalex.org/I59270414"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Chirag Jain","raw_affiliation_strings":["Department of Computational and Data Sciences, Indian Institute of Science, Bangalore, India"],"affiliations":[{"raw_affiliation_string":"Department of Computational and Data Sciences, Indian Institute of Science, Bangalore, India","institution_ids":["https://openalex.org/I59270414"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026282036","display_name":"Daniel Gibney","orcid":"https://orcid.org/0000-0003-1493-5432"},"institutions":[{"id":"https://openalex.org/I130701444","display_name":"Georgia Institute of Technology","ror":"https://ror.org/01zkghx44","country_code":"US","type":"education","lineage":["https://openalex.org/I130701444"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Daniel Gibney","raw_affiliation_strings":["School of Computer Science and Engineering, Georgia Institute of Technology, Atlanta, USA"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Georgia Institute of Technology, Atlanta, USA","institution_ids":["https://openalex.org/I130701444"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5049669178","display_name":"Sharma V. Thankachan","orcid":"https://orcid.org/0000-0002-6852-1035"},"institutions":[{"id":"https://openalex.org/I106165777","display_name":"University of Central Florida","ror":"https://ror.org/036nfer12","country_code":"US","type":"education","lineage":["https://openalex.org/I106165777"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sharma V. Thankachan","raw_affiliation_strings":["Department of Computer Science, University of Central Florida, Orlando, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Central Florida, Orlando, USA","institution_ids":["https://openalex.org/I106165777"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5026282036"],"corresponding_institution_ids":["https://openalex.org/I130701444"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":6.4762,"has_fulltext":false,"cited_by_count":14,"citation_normalized_percentile":{"value":0.97375487,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"246","last_page":"262"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9915000200271606,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/chaining","display_name":"Chaining","score":0.9664758443832397},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6936435699462891},{"id":"https://openalex.org/keywords/heuristic","display_name":"Heuristic","score":0.5436637997627258},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5299623608589172},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.5214142799377441},{"id":"https://openalex.org/keywords/time-complexity","display_name":"Time complexity","score":0.4524752199649811},{"id":"https://openalex.org/keywords/linear-programming","display_name":"Linear programming","score":0.4439620077610016},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.32900360226631165},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.15342646837234497}],"concepts":[{"id":"https://openalex.org/C49020025","wikidata":"https://www.wikidata.org/wiki/Q1059099","display_name":"Chaining","level":2,"score":0.9664758443832397},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6936435699462891},{"id":"https://openalex.org/C173801870","wikidata":"https://www.wikidata.org/wiki/Q201413","display_name":"Heuristic","level":2,"score":0.5436637997627258},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5299623608589172},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.5214142799377441},{"id":"https://openalex.org/C311688","wikidata":"https://www.wikidata.org/wiki/Q2393193","display_name":"Time complexity","level":2,"score":0.4524752199649811},{"id":"https://openalex.org/C41045048","wikidata":"https://www.wikidata.org/wiki/Q202843","display_name":"Linear programming","level":2,"score":0.4439620077610016},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.32900360226631165},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.15342646837234497},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C542102704","wikidata":"https://www.wikidata.org/wiki/Q183257","display_name":"Psychotherapist","level":1,"score":0.0},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.0},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-031-04749-7_15","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-04749-7_15","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":30,"referenced_works":["https://openalex.org/W1520134085","https://openalex.org/W1981014117","https://openalex.org/W1984940291","https://openalex.org/W1987042978","https://openalex.org/W2011632873","https://openalex.org/W2017265532","https://openalex.org/W2029832497","https://openalex.org/W2055693471","https://openalex.org/W2078230568","https://openalex.org/W2100751585","https://openalex.org/W2107282968","https://openalex.org/W2110291136","https://openalex.org/W2111295912","https://openalex.org/W2124115696","https://openalex.org/W2137759177","https://openalex.org/W2143531254","https://openalex.org/W2152331922","https://openalex.org/W2160175656","https://openalex.org/W2784788330","https://openalex.org/W2789843538","https://openalex.org/W2913934544","https://openalex.org/W2950121474","https://openalex.org/W2953174564","https://openalex.org/W3092652421","https://openalex.org/W3097643970","https://openalex.org/W3126902103","https://openalex.org/W3177485564","https://openalex.org/W3186338429","https://openalex.org/W3186590823","https://openalex.org/W4251391716"],"related_works":["https://openalex.org/W1995270367","https://openalex.org/W2767696758","https://openalex.org/W4387627836","https://openalex.org/W2107793209","https://openalex.org/W2041767423","https://openalex.org/W3028301851","https://openalex.org/W2901315987","https://openalex.org/W4200061056","https://openalex.org/W2107423006","https://openalex.org/W1581805909"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}