{"id":"https://openalex.org/W4285161644","doi":"https://doi.org/10.1007/978-3-031-04749-7_11","title":"Safety and Completeness in Flow Decompositions for RNA Assembly","display_name":"Safety and Completeness in Flow Decompositions for RNA Assembly","publication_year":2022,"publication_date":"2022-01-01","ids":{"openalex":"https://openalex.org/W4285161644","doi":"https://doi.org/10.1007/978-3-031-04749-7_11"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-031-04749-7_11","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-04749-7_11","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5014870050","display_name":"Shahbaz Khan","orcid":"https://orcid.org/0000-0001-9352-0088"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]},{"id":"https://openalex.org/I154851008","display_name":"Indian Institute of Technology Roorkee","ror":"https://ror.org/00582g326","country_code":"IN","type":"education","lineage":["https://openalex.org/I154851008"]}],"countries":["FI","IN"],"is_corresponding":true,"raw_author_name":"Shahbaz Khan","raw_affiliation_strings":["Department of Computer Science and Engineering, IIT Roorkee, Roorkee, India","Department of Computer Science, University of Helsinki, Helsinki, Finland"],"raw_orcid":"https://orcid.org/0000-0001-9352-0088","affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, IIT Roorkee, Roorkee, India","institution_ids":["https://openalex.org/I154851008"]},{"raw_affiliation_string":"Department of Computer Science, University of Helsinki, Helsinki, Finland","institution_ids":["https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083511179","display_name":"Milla Kortelainen","orcid":"https://orcid.org/0000-0003-1590-0987"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Milla Kortelainen","raw_affiliation_strings":["Department of Computer Science, University of Helsinki, Helsinki, Finland"],"raw_orcid":"https://orcid.org/0000-0003-1590-0987","affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Helsinki, Helsinki, Finland","institution_ids":["https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064412838","display_name":"Manuel C\u00e1ceres","orcid":"https://orcid.org/0000-0003-0235-6951"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Manuel C\u00e1ceres","raw_affiliation_strings":["Department of Computer Science, University of Helsinki, Helsinki, Finland"],"raw_orcid":"https://orcid.org/0000-0003-0235-6951","affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Helsinki, Helsinki, Finland","institution_ids":["https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023404314","display_name":"Lucia Williams","orcid":"https://orcid.org/0000-0003-3785-0247"},"institutions":[{"id":"https://openalex.org/I23732399","display_name":"Montana State University","ror":"https://ror.org/02w0trx84","country_code":"US","type":"education","lineage":["https://openalex.org/I23732399","https://openalex.org/I4210126032"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lucia Williams","raw_affiliation_strings":["School of Computing, Montana State University, Bozeman, USA"],"raw_orcid":"https://orcid.org/0000-0003-3785-0247","affiliations":[{"raw_affiliation_string":"School of Computing, Montana State University, Bozeman, USA","institution_ids":["https://openalex.org/I23732399"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5063897224","display_name":"Alexandru I. Tomescu","orcid":"https://orcid.org/0000-0002-5747-8350"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Alexandru I. Tomescu","raw_affiliation_strings":["Department of Computer Science, University of Helsinki, Helsinki, Finland"],"raw_orcid":"https://orcid.org/0000-0002-5747-8350","affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Helsinki, Helsinki, Finland","institution_ids":["https://openalex.org/I133731052"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5014870050"],"corresponding_institution_ids":["https://openalex.org/I133731052","https://openalex.org/I154851008"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":6.0068,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.96018074,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"177","last_page":"192"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9948999881744385,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6513756513595581},{"id":"https://openalex.org/keywords/greedy-algorithm","display_name":"Greedy algorithm","score":0.6032086610794067},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5440626740455627},{"id":"https://openalex.org/keywords/identifiability","display_name":"Identifiability","score":0.4951860010623932},{"id":"https://openalex.org/keywords/probabilistic-logic","display_name":"Probabilistic logic","score":0.4805236756801605},{"id":"https://openalex.org/keywords/path","display_name":"Path (computing)","score":0.45778974890708923},{"id":"https://openalex.org/keywords/maximum-flow-problem","display_name":"Maximum flow problem","score":0.43960803747177124},{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.4355591833591461},{"id":"https://openalex.org/keywords/metric","display_name":"Metric (unit)","score":0.43471062183380127},{"id":"https://openalex.org/keywords/heuristic","display_name":"Heuristic","score":0.427115261554718},{"id":"https://openalex.org/keywords/mathematical-optimization","display_name":"Mathematical optimization","score":0.4031190872192383},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3520682156085968},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2774624824523926},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.09410586953163147}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6513756513595581},{"id":"https://openalex.org/C51823790","wikidata":"https://www.wikidata.org/wiki/Q504353","display_name":"Greedy algorithm","level":2,"score":0.6032086610794067},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5440626740455627},{"id":"https://openalex.org/C122770356","wikidata":"https://www.wikidata.org/wiki/Q1656753","display_name":"Identifiability","level":2,"score":0.4951860010623932},{"id":"https://openalex.org/C49937458","wikidata":"https://www.wikidata.org/wiki/Q2599292","display_name":"Probabilistic logic","level":2,"score":0.4805236756801605},{"id":"https://openalex.org/C2777735758","wikidata":"https://www.wikidata.org/wiki/Q817765","display_name":"Path (computing)","level":2,"score":0.45778974890708923},{"id":"https://openalex.org/C157469704","wikidata":"https://www.wikidata.org/wiki/Q2585642","display_name":"Maximum flow problem","level":2,"score":0.43960803747177124},{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.4355591833591461},{"id":"https://openalex.org/C176217482","wikidata":"https://www.wikidata.org/wiki/Q860554","display_name":"Metric (unit)","level":2,"score":0.43471062183380127},{"id":"https://openalex.org/C173801870","wikidata":"https://www.wikidata.org/wiki/Q201413","display_name":"Heuristic","level":2,"score":0.427115261554718},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.4031190872192383},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3520682156085968},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2774624824523926},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.09410586953163147},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C21547014","wikidata":"https://www.wikidata.org/wiki/Q1423657","display_name":"Operations management","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-031-04749-7_11","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-031-04749-7_11","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":39,"referenced_works":["https://openalex.org/W566841155","https://openalex.org/W1850079471","https://openalex.org/W1981509058","https://openalex.org/W1984236772","https://openalex.org/W1999851725","https://openalex.org/W2053057991","https://openalex.org/W2061687898","https://openalex.org/W2068289888","https://openalex.org/W2078331392","https://openalex.org/W2099964107","https://openalex.org/W2104005232","https://openalex.org/W2126766730","https://openalex.org/W2136651963","https://openalex.org/W2150003856","https://openalex.org/W2151674273","https://openalex.org/W2164946254","https://openalex.org/W2406547600","https://openalex.org/W2535388830","https://openalex.org/W2768985026","https://openalex.org/W2773298966","https://openalex.org/W2787141511","https://openalex.org/W2792957821","https://openalex.org/W2949066704","https://openalex.org/W2951613337","https://openalex.org/W2963833316","https://openalex.org/W2965565043","https://openalex.org/W2994941291","https://openalex.org/W3004548325","https://openalex.org/W3017765916","https://openalex.org/W3078256949","https://openalex.org/W3081735378","https://openalex.org/W3082378466","https://openalex.org/W3083664261","https://openalex.org/W3128936260","https://openalex.org/W3217275231","https://openalex.org/W4225897723","https://openalex.org/W4285161644","https://openalex.org/W4393891077","https://openalex.org/W6798338475"],"related_works":["https://openalex.org/W3183948672","https://openalex.org/W3173606202","https://openalex.org/W3110381201","https://openalex.org/W2948807893","https://openalex.org/W2778153218","https://openalex.org/W1531601525","https://openalex.org/W1827895227","https://openalex.org/W4297427155","https://openalex.org/W4285104409","https://openalex.org/W4210317843"],"abstract_inverted_index":null,"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":3}],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2025-10-10T00:00:00"}
