{"id":"https://openalex.org/W3136508651","doi":"https://doi.org/10.1007/978-3-030-91814-9_10","title":"PIMBA: A PIpeline for MetaBarcoding Analysis","display_name":"PIMBA: A PIpeline for MetaBarcoding Analysis","publication_year":2021,"publication_date":"2021-01-01","ids":{"openalex":"https://openalex.org/W3136508651","doi":"https://doi.org/10.1007/978-3-030-91814-9_10","mag":"3136508651"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-91814-9_10","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-91814-9_10","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Renato R. M. Oliveira","orcid":null},"institutions":[{"id":"https://openalex.org/I4210161302","display_name":"Vale Technological Institute","ror":"https://ror.org/05wnasr61","country_code":"BR","type":"education","lineage":["https://openalex.org/I4210161302"]},{"id":"https://openalex.org/I110200422","display_name":"Universidade Federal de Minas Gerais","ror":"https://ror.org/0176yjw32","country_code":"BR","type":"education","lineage":["https://openalex.org/I110200422"]}],"countries":["BR"],"is_corresponding":true,"raw_author_name":"Renato R. M. Oliveira","raw_affiliation_strings":["Instituto Tecnol\u00f3gico Vale, Bel\u00e9m, Par\u00e1, Brazil","Programa de P\u00f3s-Gradua\u00e7\u00e3o em Bioinform\u00e1tica, Instituto de Ci\u00eancias Biol\u00f3gicas, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Instituto Tecnol\u00f3gico Vale, Bel\u00e9m, Par\u00e1, Brazil","institution_ids":["https://openalex.org/I4210161302"]},{"raw_affiliation_string":"Programa de P\u00f3s-Gradua\u00e7\u00e3o em Bioinform\u00e1tica, Instituto de Ci\u00eancias Biol\u00f3gicas, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil","institution_ids":["https://openalex.org/I110200422"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Ra\u00edssa Silva","orcid":null},"institutions":[{"id":"https://openalex.org/I4210161302","display_name":"Vale Technological Institute","ror":"https://ror.org/05wnasr61","country_code":"BR","type":"education","lineage":["https://openalex.org/I4210161302"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Ra\u00edssa Silva","raw_affiliation_strings":["Instituto Tecnol\u00f3gico Vale, Bel\u00e9m, Par\u00e1, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Instituto Tecnol\u00f3gico Vale, Bel\u00e9m, Par\u00e1, Brazil","institution_ids":["https://openalex.org/I4210161302"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Gisele L. Nunes","orcid":null},"institutions":[{"id":"https://openalex.org/I4210161302","display_name":"Vale Technological Institute","ror":"https://ror.org/05wnasr61","country_code":"BR","type":"education","lineage":["https://openalex.org/I4210161302"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Gisele L. Nunes","raw_affiliation_strings":["Instituto Tecnol\u00f3gico Vale, Bel\u00e9m, Par\u00e1, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Instituto Tecnol\u00f3gico Vale, Bel\u00e9m, Par\u00e1, Brazil","institution_ids":["https://openalex.org/I4210161302"]}]},{"author_position":"last","author":{"id":null,"display_name":"Guilherme Oliveira","orcid":null},"institutions":[{"id":"https://openalex.org/I4210161302","display_name":"Vale Technological Institute","ror":"https://ror.org/05wnasr61","country_code":"BR","type":"education","lineage":["https://openalex.org/I4210161302"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Guilherme Oliveira","raw_affiliation_strings":["Instituto Tecnol\u00f3gico Vale, Bel\u00e9m, Par\u00e1, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Instituto Tecnol\u00f3gico Vale, Bel\u00e9m, Par\u00e1, Brazil","institution_ids":["https://openalex.org/I4210161302"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I110200422","https://openalex.org/I4210161302"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":3.7651,"has_fulltext":false,"cited_by_count":12,"citation_normalized_percentile":{"value":0.92211838,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"106","last_page":"116"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12640","display_name":"Environmental DNA in Biodiversity Studies","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12640","display_name":"Environmental DNA in Biodiversity Studies","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9440000057220459,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10627","display_name":"Advanced Image and Video Retrieval Techniques","score":0.9086999893188477,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.8392999768257141},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5602999925613403},{"id":"https://openalex.org/keywords/pipeline-transport","display_name":"Pipeline transport","score":0.4609000086784363},{"id":"https://openalex.org/keywords/environmental-dna","display_name":"Environmental DNA","score":0.3720000088214874},{"id":"https://openalex.org/keywords/environmental-monitoring","display_name":"Environmental monitoring","score":0.3165000081062317}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8413000106811523},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.8392999768257141},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5602999925613403},{"id":"https://openalex.org/C175309249","wikidata":"https://www.wikidata.org/wiki/Q725864","display_name":"Pipeline transport","level":2,"score":0.4609000086784363},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.3781999945640564},{"id":"https://openalex.org/C2779969263","wikidata":"https://www.wikidata.org/wiki/Q25098939","display_name":"Environmental DNA","level":3,"score":0.3720000088214874},{"id":"https://openalex.org/C539469273","wikidata":"https://www.wikidata.org/wiki/Q1749732","display_name":"Environmental monitoring","level":2,"score":0.3165000081062317},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.3061999976634979},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3025999963283539},{"id":"https://openalex.org/C2984968299","wikidata":"https://www.wikidata.org/wiki/Q1077784","display_name":"Software tool","level":3,"score":0.27160000801086426},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2694000005722046}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-030-91814-9_10","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-91814-9_10","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":33,"referenced_works":["https://openalex.org/W1680797894","https://openalex.org/W1966788611","https://openalex.org/W1988925586","https://openalex.org/W2034285706","https://openalex.org/W2056072739","https://openalex.org/W2056279562","https://openalex.org/W2063695906","https://openalex.org/W2072603644","https://openalex.org/W2072970694","https://openalex.org/W2098035523","https://openalex.org/W2101821016","https://openalex.org/W2108718991","https://openalex.org/W2121180999","https://openalex.org/W2128711701","https://openalex.org/W2130731460","https://openalex.org/W2151350595","https://openalex.org/W2194764270","https://openalex.org/W2263582186","https://openalex.org/W2315497846","https://openalex.org/W2506843120","https://openalex.org/W2513506562","https://openalex.org/W2592367925","https://openalex.org/W2626467946","https://openalex.org/W2724989966","https://openalex.org/W2754769271","https://openalex.org/W2765747110","https://openalex.org/W2792371390","https://openalex.org/W2793229774","https://openalex.org/W2801839545","https://openalex.org/W2956832927","https://openalex.org/W3011364365","https://openalex.org/W3121953277","https://openalex.org/W4242729757"],"related_works":[],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":1}],"updated_date":"2026-05-03T08:25:01.440150","created_date":"2021-03-29T00:00:00"}
