{"id":"https://openalex.org/W3192828113","doi":"https://doi.org/10.1007/978-3-030-91415-8_14","title":"A k-mer Based Approach for SARS-CoV-2 Variant Identification","display_name":"A k-mer Based Approach for SARS-CoV-2 Variant Identification","publication_year":2021,"publication_date":"2021-01-01","ids":{"openalex":"https://openalex.org/W3192828113","doi":"https://doi.org/10.1007/978-3-030-91415-8_14","mag":"3192828113"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-91415-8_14","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-91415-8_14","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["arxiv","crossref","datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2108.03465","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5064858842","display_name":"Sarwan Ali","orcid":"https://orcid.org/0000-0001-8121-2168"},"institutions":[{"id":"https://openalex.org/I181565077","display_name":"Georgia State University","ror":"https://ror.org/03qt6ba18","country_code":"US","type":"education","lineage":["https://openalex.org/I181565077"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sarwan Ali","raw_affiliation_strings":["Georgia State University, Atlanta, GA, USA","Georgia State University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Georgia State University, Atlanta, GA, USA","institution_ids":["https://openalex.org/I181565077"]},{"raw_affiliation_string":"Georgia State University","institution_ids":["https://openalex.org/I181565077"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002466782","display_name":"Bikram Sahoo","orcid":"https://orcid.org/0000-0001-6481-2583"},"institutions":[{"id":"https://openalex.org/I181565077","display_name":"Georgia State University","ror":"https://ror.org/03qt6ba18","country_code":"US","type":"education","lineage":["https://openalex.org/I181565077"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bikram Sahoo","raw_affiliation_strings":["Georgia State University, Atlanta, GA, USA","Georgia State University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Georgia State University, Atlanta, GA, USA","institution_ids":["https://openalex.org/I181565077"]},{"raw_affiliation_string":"Georgia State University","institution_ids":["https://openalex.org/I181565077"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075697571","display_name":"Naimat Ullah","orcid":"https://orcid.org/0000-0002-4658-4721"},"institutions":[{"id":"https://openalex.org/I181565077","display_name":"Georgia State University","ror":"https://ror.org/03qt6ba18","country_code":"US","type":"education","lineage":["https://openalex.org/I181565077"]},{"id":"https://openalex.org/I207789805","display_name":"Lahore University of Management Sciences","ror":"https://ror.org/05b5x4a35","country_code":"PK","type":"education","lineage":["https://openalex.org/I207789805"]}],"countries":["PK","US"],"is_corresponding":false,"raw_author_name":"Naimat Ullah","raw_affiliation_strings":["Lahore University of Management Sciences, Lahore, Pakistan","Georgia State University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lahore University of Management Sciences, Lahore, Pakistan","institution_ids":["https://openalex.org/I207789805"]},{"raw_affiliation_string":"Georgia State University","institution_ids":["https://openalex.org/I181565077"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064734149","display_name":"Alexander Zelikovskiy","orcid":null},"institutions":[{"id":"https://openalex.org/I181565077","display_name":"Georgia State University","ror":"https://ror.org/03qt6ba18","country_code":"US","type":"education","lineage":["https://openalex.org/I181565077"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alexander Zelikovskiy","raw_affiliation_strings":["Georgia State University, Atlanta, GA, USA","Georgia State University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Georgia State University, Atlanta, GA, USA","institution_ids":["https://openalex.org/I181565077"]},{"raw_affiliation_string":"Georgia State University","institution_ids":["https://openalex.org/I181565077"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026228482","display_name":"Murray Patterson","orcid":"https://orcid.org/0000-0002-4329-0234"},"institutions":[{"id":"https://openalex.org/I181565077","display_name":"Georgia State University","ror":"https://ror.org/03qt6ba18","country_code":"US","type":"education","lineage":["https://openalex.org/I181565077"]},{"id":"https://openalex.org/I207789805","display_name":"Lahore University of Management Sciences","ror":"https://ror.org/05b5x4a35","country_code":"PK","type":"education","lineage":["https://openalex.org/I207789805"]}],"countries":["PK","US"],"is_corresponding":true,"raw_author_name":"Murray Patterson","raw_affiliation_strings":["Georgia State University, Atlanta, GA, USA","[Lahore University of Management Sciences]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Georgia State University, Atlanta, GA, USA","institution_ids":["https://openalex.org/I181565077"]},{"raw_affiliation_string":"[Lahore University of Management Sciences]","institution_ids":["https://openalex.org/I207789805"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5000099609","display_name":"Imdadullah Khan","orcid":"https://orcid.org/0000-0002-6955-6168"},"institutions":[{"id":"https://openalex.org/I207789805","display_name":"Lahore University of Management Sciences","ror":"https://ror.org/05b5x4a35","country_code":"PK","type":"education","lineage":["https://openalex.org/I207789805"]}],"countries":["PK"],"is_corresponding":true,"raw_author_name":"Imdadullah Khan","raw_affiliation_strings":["Lahore University of Management Sciences, Lahore, Pakistan","[Lahore University of Management Sciences]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lahore University of Management Sciences, Lahore, Pakistan","institution_ids":["https://openalex.org/I207789805"]},{"raw_affiliation_string":"[Lahore University of Management Sciences]","institution_ids":["https://openalex.org/I207789805"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5000099609","https://openalex.org/A5026228482"],"corresponding_institution_ids":["https://openalex.org/I181565077","https://openalex.org/I207789805"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":5.1404,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.94900222,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"153","last_page":"164"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10118","display_name":"SARS-CoV-2 and COVID-19 Research","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10118","display_name":"SARS-CoV-2 and COVID-19 Research","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11775","display_name":"COVID-19 diagnosis using AI","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.6396105289459229},{"id":"https://openalex.org/keywords/coronavirus-disease-2019","display_name":"Coronavirus disease 2019 (COVID-19)","score":0.6347610950469971},{"id":"https://openalex.org/keywords/coronavirus","display_name":"Coronavirus","score":0.624535322189331},{"id":"https://openalex.org/keywords/spike","display_name":"Spike (software development)","score":0.5994846820831299},{"id":"https://openalex.org/keywords/severe-acute-respiratory-syndrome-coronavirus-2","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","score":0.5941711664199829},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5432561039924622},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5066471695899963},{"id":"https://openalex.org/keywords/spike-protein","display_name":"Spike Protein","score":0.49099066853523254},{"id":"https://openalex.org/keywords/mutation","display_name":"Mutation","score":0.4865964651107788},{"id":"https://openalex.org/keywords/variation","display_name":"Variation (astronomy)","score":0.44581863284111023},{"id":"https://openalex.org/keywords/outbreak","display_name":"Outbreak","score":0.4278094172477722},{"id":"https://openalex.org/keywords/2019-20-coronavirus-outbreak","display_name":"2019-20 coronavirus outbreak","score":0.4200553894042969},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.40844887495040894},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.37229880690574646},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3324960172176361},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2382400929927826},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.2270546555519104},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.18788251280784607},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.18448469042778015},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.17479580640792847},{"id":"https://openalex.org/keywords/infectious-disease","display_name":"Infectious disease (medical specialty)","score":0.1024867594242096}],"concepts":[{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6396105289459229},{"id":"https://openalex.org/C3008058167","wikidata":"https://www.wikidata.org/wiki/Q84263196","display_name":"Coronavirus disease 2019 (COVID-19)","level":4,"score":0.6347610950469971},{"id":"https://openalex.org/C2777648638","wikidata":"https://www.wikidata.org/wiki/Q57751738","display_name":"Coronavirus","level":5,"score":0.624535322189331},{"id":"https://openalex.org/C2781390188","wikidata":"https://www.wikidata.org/wiki/Q25203449","display_name":"Spike (software development)","level":2,"score":0.5994846820831299},{"id":"https://openalex.org/C3007834351","wikidata":"https://www.wikidata.org/wiki/Q82069695","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","level":5,"score":0.5941711664199829},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5432561039924622},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5066471695899963},{"id":"https://openalex.org/C2909509916","wikidata":"https://www.wikidata.org/wiki/Q22329850","display_name":"Spike Protein","level":5,"score":0.49099066853523254},{"id":"https://openalex.org/C501734568","wikidata":"https://www.wikidata.org/wiki/Q42918","display_name":"Mutation","level":3,"score":0.4865964651107788},{"id":"https://openalex.org/C2778334786","wikidata":"https://www.wikidata.org/wiki/Q1586270","display_name":"Variation (astronomy)","level":2,"score":0.44581863284111023},{"id":"https://openalex.org/C116675565","wikidata":"https://www.wikidata.org/wiki/Q3241045","display_name":"Outbreak","level":2,"score":0.4278094172477722},{"id":"https://openalex.org/C3006700255","wikidata":"https://www.wikidata.org/wiki/Q81068910","display_name":"2019-20 coronavirus outbreak","level":3,"score":0.4200553894042969},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.40844887495040894},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.37229880690574646},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3324960172176361},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2382400929927826},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.2270546555519104},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.18788251280784607},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.18448469042778015},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.17479580640792847},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.1024867594242096},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.0},{"id":"https://openalex.org/C44870925","wikidata":"https://www.wikidata.org/wiki/Q37547","display_name":"Astrophysics","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1007/978-3-030-91415-8_14","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-91415-8_14","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:arXiv.org:2108.03465","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2108.03465","pdf_url":"https://arxiv.org/pdf/2108.03465","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},{"id":"mag:3192828113","is_oa":true,"landing_page_url":"https://www.arxiv.org/pdf/2108.03465","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"arXiv (Cornell University)","raw_type":null},{"id":"doi:10.48550/arxiv.2108.03465","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2108.03465","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Preprint"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2108.03465","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2108.03465","pdf_url":"https://arxiv.org/pdf/2108.03465","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.7099999785423279}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":38,"referenced_works":["https://openalex.org/W2103914106","https://openalex.org/W2166162901","https://openalex.org/W2169931829","https://openalex.org/W2187089797","https://openalex.org/W2278188209","https://openalex.org/W2950815005","https://openalex.org/W2963008485","https://openalex.org/W2963953805","https://openalex.org/W2991300985","https://openalex.org/W2997636468","https://openalex.org/W2997987931","https://openalex.org/W2999010333","https://openalex.org/W2999797826","https://openalex.org/W3014941429","https://openalex.org/W3021378185","https://openalex.org/W3030593001","https://openalex.org/W3035692338","https://openalex.org/W3056004776","https://openalex.org/W3085065390","https://openalex.org/W3087224093","https://openalex.org/W3092652608","https://openalex.org/W3098754359","https://openalex.org/W3101072897","https://openalex.org/W3114206215","https://openalex.org/W3121365103","https://openalex.org/W3126641925","https://openalex.org/W3127156551","https://openalex.org/W3162765748","https://openalex.org/W3164251887","https://openalex.org/W3164973676","https://openalex.org/W3176294083","https://openalex.org/W3183923930","https://openalex.org/W3196141744","https://openalex.org/W3197540743","https://openalex.org/W3198971816","https://openalex.org/W3209798985","https://openalex.org/W4253260758","https://openalex.org/W6600659201"],"related_works":["https://openalex.org/W3210087809","https://openalex.org/W3183673151","https://openalex.org/W3132787182","https://openalex.org/W3210524078","https://openalex.org/W3186678052","https://openalex.org/W2952309090","https://openalex.org/W3113544273","https://openalex.org/W3172962431","https://openalex.org/W2890841681","https://openalex.org/W2745399032","https://openalex.org/W2097566568","https://openalex.org/W3199639770","https://openalex.org/W2017062545","https://openalex.org/W2747462854","https://openalex.org/W2752403657","https://openalex.org/W2798667639","https://openalex.org/W765196177","https://openalex.org/W2207204044","https://openalex.org/W2081879778","https://openalex.org/W3160729065"],"abstract_inverted_index":null,"counts_by_year":[{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1}],"updated_date":"2026-08-04T08:18:43.703281","created_date":"2025-10-10T00:00:00"}
