{"id":"https://openalex.org/W3200958208","doi":"https://doi.org/10.1007/978-3-030-87016-4_29","title":"A New Method for Binary Classification of Proteins with Machine Learning","display_name":"A New Method for Binary Classification of Proteins with Machine Learning","publication_year":2021,"publication_date":"2021-01-01","ids":{"openalex":"https://openalex.org/W3200958208","doi":"https://doi.org/10.1007/978-3-030-87016-4_29","mag":"3200958208"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-87016-4_29","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-87016-4_29","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["arxiv","crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2111.01976","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5032252970","display_name":"Damiano Perri","orcid":"https://orcid.org/0000-0001-6815-6659"},"institutions":[{"id":"https://openalex.org/I27483092","display_name":"University of Perugia","ror":"https://ror.org/00x27da85","country_code":"IT","type":"education","lineage":["https://openalex.org/I27483092"]},{"id":"https://openalex.org/I45084792","display_name":"University of Florence","ror":"https://ror.org/04jr1s763","country_code":"IT","type":"education","lineage":["https://openalex.org/I45084792"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Damiano Perri","raw_affiliation_strings":["Department of Mathematics and Computer Science, University of Florence, Florence, Italy","Department of Mathematics and Computer Science, University of Perugia, Perugia, Italy"],"raw_orcid":"https://orcid.org/0000-0001-6815-6659","affiliations":[{"raw_affiliation_string":"Department of Mathematics and Computer Science, University of Florence, Florence, Italy","institution_ids":["https://openalex.org/I45084792"]},{"raw_affiliation_string":"Department of Mathematics and Computer Science, University of Perugia, Perugia, Italy","institution_ids":["https://openalex.org/I27483092"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088284312","display_name":"Marco Simonetti","orcid":"https://orcid.org/0000-0003-2923-5519"},"institutions":[{"id":"https://openalex.org/I27483092","display_name":"University of Perugia","ror":"https://ror.org/00x27da85","country_code":"IT","type":"education","lineage":["https://openalex.org/I27483092"]},{"id":"https://openalex.org/I45084792","display_name":"University of Florence","ror":"https://ror.org/04jr1s763","country_code":"IT","type":"education","lineage":["https://openalex.org/I45084792"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Marco Simonetti","raw_affiliation_strings":["Department of Mathematics and Computer Science, University of Florence, Florence, Italy","Department of Mathematics and Computer Science, University of Perugia, Perugia, Italy"],"raw_orcid":"https://orcid.org/0000-0003-2923-5519","affiliations":[{"raw_affiliation_string":"Department of Mathematics and Computer Science, University of Florence, Florence, Italy","institution_ids":["https://openalex.org/I45084792"]},{"raw_affiliation_string":"Department of Mathematics and Computer Science, University of Perugia, Perugia, Italy","institution_ids":["https://openalex.org/I27483092"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086060513","display_name":"Andrea Lombardi","orcid":"https://orcid.org/0000-0002-7875-2697"},"institutions":[{"id":"https://openalex.org/I27483092","display_name":"University of Perugia","ror":"https://ror.org/00x27da85","country_code":"IT","type":"education","lineage":["https://openalex.org/I27483092"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Andrea Lombardi","raw_affiliation_strings":["Department of Chemistry, Biology and Biotechnology, University of Perugia, Perugia, Italy"],"raw_orcid":"https://orcid.org/0000-0002-7875-2697","affiliations":[{"raw_affiliation_string":"Department of Chemistry, Biology and Biotechnology, University of Perugia, Perugia, Italy","institution_ids":["https://openalex.org/I27483092"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070740378","display_name":"Noelia Faginas\u2010Lago","orcid":"https://orcid.org/0000-0002-4056-3364"},"institutions":[{"id":"https://openalex.org/I27483092","display_name":"University of Perugia","ror":"https://ror.org/00x27da85","country_code":"IT","type":"education","lineage":["https://openalex.org/I27483092"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Noelia Faginas-Lago","raw_affiliation_strings":["Department of Chemistry, Biology and Biotechnology, University of Perugia, Perugia, Italy"],"raw_orcid":"https://orcid.org/0000-0002-4056-3364","affiliations":[{"raw_affiliation_string":"Department of Chemistry, Biology and Biotechnology, University of Perugia, Perugia, Italy","institution_ids":["https://openalex.org/I27483092"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5058074271","display_name":"Osvaldo Gervasi","orcid":"https://orcid.org/0000-0003-4327-520X"},"institutions":[{"id":"https://openalex.org/I27483092","display_name":"University of Perugia","ror":"https://ror.org/00x27da85","country_code":"IT","type":"education","lineage":["https://openalex.org/I27483092"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Osvaldo Gervasi","raw_affiliation_strings":["Department of Mathematics and Computer Science, University of Perugia, Perugia, Italy"],"raw_orcid":"https://orcid.org/0000-0003-4327-520X","affiliations":[{"raw_affiliation_string":"Department of Mathematics and Computer Science, University of Perugia, Perugia, Italy","institution_ids":["https://openalex.org/I27483092"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5032252970"],"corresponding_institution_ids":["https://openalex.org/I27483092","https://openalex.org/I45084792"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":4.0483,"has_fulltext":false,"cited_by_count":12,"citation_normalized_percentile":{"value":0.95371109,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"388","last_page":"397"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9958000183105469,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9937000274658203,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.7196626663208008},{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.7004289627075195},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.686845064163208},{"id":"https://openalex.org/keywords/protein-data-bank","display_name":"Protein Data Bank (RCSB PDB)","score":0.6096675992012024},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.5438514351844788},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.5240181684494019},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5092188119888306},{"id":"https://openalex.org/keywords/binary-classification","display_name":"Binary classification","score":0.45617127418518066},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.44679737091064453},{"id":"https://openalex.org/keywords/binary-number","display_name":"Binary number","score":0.4322248697280884},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.4287105202674866},{"id":"https://openalex.org/keywords/protein-data-bank","display_name":"Protein Data Bank","score":0.4207974076271057},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3367660939693451},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.1817513108253479},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.14220130443572998},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.09442824125289917},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.06594932079315186}],"concepts":[{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.7196626663208008},{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.7004289627075195},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.686845064163208},{"id":"https://openalex.org/C65556437","wikidata":"https://www.wikidata.org/wiki/Q766195","display_name":"Protein Data Bank (RCSB PDB)","level":2,"score":0.6096675992012024},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.5438514351844788},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.5240181684494019},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5092188119888306},{"id":"https://openalex.org/C66905080","wikidata":"https://www.wikidata.org/wiki/Q17005494","display_name":"Binary classification","level":3,"score":0.45617127418518066},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.44679737091064453},{"id":"https://openalex.org/C48372109","wikidata":"https://www.wikidata.org/wiki/Q3913","display_name":"Binary number","level":2,"score":0.4322248697280884},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.4287105202674866},{"id":"https://openalex.org/C119145174","wikidata":"https://www.wikidata.org/wiki/Q7251429","display_name":"Protein Data Bank","level":3,"score":0.4207974076271057},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3367660939693451},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.1817513108253479},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.14220130443572998},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.09442824125289917},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.06594932079315186},{"id":"https://openalex.org/C71240020","wikidata":"https://www.wikidata.org/wiki/Q186011","display_name":"Stereochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C94375191","wikidata":"https://www.wikidata.org/wiki/Q11205","display_name":"Arithmetic","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/978-3-030-87016-4_29","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-87016-4_29","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:arXiv.org:2111.01976","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2111.01976","pdf_url":"https://arxiv.org/pdf/2111.01976","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"pmh:oai:flore.unifi.it:2158/1293222","is_oa":false,"landing_page_url":"https://link.springer.com/chapter/10.1007/978-3-030-87016-4_29","pdf_url":null,"source":{"id":"https://openalex.org/S4306402033","display_name":"Florence Research (University of Florence)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I45084792","host_organization_name":"University of Florence","host_organization_lineage":["https://openalex.org/I45084792"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/conferenceObject"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2111.01976","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2111.01976","pdf_url":"https://arxiv.org/pdf/2111.01976","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":31,"referenced_works":["https://openalex.org/W292488259","https://openalex.org/W1552455080","https://openalex.org/W1603605260","https://openalex.org/W1984794455","https://openalex.org/W2004524557","https://openalex.org/W2019488416","https://openalex.org/W2024829861","https://openalex.org/W2040994527","https://openalex.org/W2077431172","https://openalex.org/W2105131949","https://openalex.org/W2109109045","https://openalex.org/W2112411768","https://openalex.org/W2115694887","https://openalex.org/W2116407498","https://openalex.org/W2130479394","https://openalex.org/W2252158617","https://openalex.org/W2797820114","https://openalex.org/W2809927589","https://openalex.org/W2950128007","https://openalex.org/W2955064481","https://openalex.org/W2955237167","https://openalex.org/W2963833291","https://openalex.org/W2970962460","https://openalex.org/W3000082467","https://openalex.org/W3010488723","https://openalex.org/W3043400672","https://openalex.org/W3089651955","https://openalex.org/W3091316498","https://openalex.org/W3120016685","https://openalex.org/W3207990842","https://openalex.org/W4226318523"],"related_works":["https://openalex.org/W2088162897","https://openalex.org/W2090630809","https://openalex.org/W2106612397","https://openalex.org/W4387804157","https://openalex.org/W2518314460","https://openalex.org/W2589205199","https://openalex.org/W2119891507","https://openalex.org/W2089869950","https://openalex.org/W2047544230","https://openalex.org/W4200034545"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":3}],"updated_date":"2026-08-05T07:39:15.569665","created_date":"2025-10-10T00:00:00"}