{"id":"https://openalex.org/W3196290979","doi":"https://doi.org/10.1007/978-3-030-86230-5_46","title":"Biomedical Knowledge Graph Embeddings for Personalized Medicine","display_name":"Biomedical Knowledge Graph Embeddings for Personalized Medicine","publication_year":2021,"publication_date":"2021-01-01","ids":{"openalex":"https://openalex.org/W3196290979","doi":"https://doi.org/10.1007/978-3-030-86230-5_46","mag":"3196290979"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-86230-5_46","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-86230-5_46","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5067530600","display_name":"Joana Vilela","orcid":"https://orcid.org/0000-0002-2465-5795"},"institutions":[{"id":"https://openalex.org/I4210142220","display_name":"National Institute of Health Dr. Ricardo Jorge","ror":"https://ror.org/03mx8d427","country_code":"PT","type":"other","lineage":["https://openalex.org/I4210117458","https://openalex.org/I4210142220","https://openalex.org/I4210157859"]}],"countries":["PT"],"is_corresponding":true,"raw_author_name":"Joana Vilela","raw_affiliation_strings":["BioISI - Biosystems and Integrative Sciences Institute, Lisboa, Portugal","Instituto Nacional de Sa\u00fade Doutor Ricardo Jorge, Lisboa, Portugal"],"raw_orcid":"https://orcid.org/0000-0002-2465-5795","affiliations":[{"raw_affiliation_string":"BioISI - Biosystems and Integrative Sciences Institute, Lisboa, Portugal","institution_ids":[]},{"raw_affiliation_string":"Instituto Nacional de Sa\u00fade Doutor Ricardo Jorge, Lisboa, Portugal","institution_ids":["https://openalex.org/I4210142220"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053907329","display_name":"Muhammad Asif","orcid":"https://orcid.org/0000-0001-9144-7630"},"institutions":[{"id":"https://openalex.org/I4210142220","display_name":"National Institute of Health Dr. Ricardo Jorge","ror":"https://ror.org/03mx8d427","country_code":"PT","type":"other","lineage":["https://openalex.org/I4210117458","https://openalex.org/I4210142220","https://openalex.org/I4210157859"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Muhammad Asif","raw_affiliation_strings":["BioISI - Biosystems and Integrative Sciences Institute, Lisboa, Portugal","Instituto Nacional de Sa\u00fade Doutor Ricardo Jorge, Lisboa, Portugal"],"raw_orcid":"https://orcid.org/0000-0001-9144-7630","affiliations":[{"raw_affiliation_string":"BioISI - Biosystems and Integrative Sciences Institute, Lisboa, Portugal","institution_ids":[]},{"raw_affiliation_string":"Instituto Nacional de Sa\u00fade Doutor Ricardo Jorge, Lisboa, Portugal","institution_ids":["https://openalex.org/I4210142220"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012294065","display_name":"Ana Rita Marques","orcid":"https://orcid.org/0000-0003-4144-7020"},"institutions":[{"id":"https://openalex.org/I4210142220","display_name":"National Institute of Health Dr. Ricardo Jorge","ror":"https://ror.org/03mx8d427","country_code":"PT","type":"other","lineage":["https://openalex.org/I4210117458","https://openalex.org/I4210142220","https://openalex.org/I4210157859"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Ana Rita Marques","raw_affiliation_strings":["BioISI - Biosystems and Integrative Sciences Institute, Lisboa, Portugal","Instituto Nacional de Sa\u00fade Doutor Ricardo Jorge, Lisboa, Portugal"],"raw_orcid":"https://orcid.org/0000-0003-4144-7020","affiliations":[{"raw_affiliation_string":"BioISI - Biosystems and Integrative Sciences Institute, Lisboa, Portugal","institution_ids":[]},{"raw_affiliation_string":"Instituto Nacional de Sa\u00fade Doutor Ricardo Jorge, Lisboa, Portugal","institution_ids":["https://openalex.org/I4210142220"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021980248","display_name":"Jo\u00e3o Xavier Santos","orcid":"https://orcid.org/0000-0003-2797-5513"},"institutions":[{"id":"https://openalex.org/I4210142220","display_name":"National Institute of Health Dr. Ricardo Jorge","ror":"https://ror.org/03mx8d427","country_code":"PT","type":"other","lineage":["https://openalex.org/I4210117458","https://openalex.org/I4210142220","https://openalex.org/I4210157859"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Jo\u00e3o Xavier Santos","raw_affiliation_strings":["BioISI - Biosystems and Integrative Sciences Institute, Lisboa, Portugal","Instituto Nacional de Sa\u00fade Doutor Ricardo Jorge, Lisboa, Portugal"],"raw_orcid":"https://orcid.org/0000-0003-2797-5513","affiliations":[{"raw_affiliation_string":"BioISI - Biosystems and Integrative Sciences Institute, Lisboa, Portugal","institution_ids":[]},{"raw_affiliation_string":"Instituto Nacional de Sa\u00fade Doutor Ricardo Jorge, Lisboa, Portugal","institution_ids":["https://openalex.org/I4210142220"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004833035","display_name":"C\u00e9lia Rasga","orcid":"https://orcid.org/0000-0002-9969-6241"},"institutions":[{"id":"https://openalex.org/I4210142220","display_name":"National Institute of Health Dr. Ricardo Jorge","ror":"https://ror.org/03mx8d427","country_code":"PT","type":"other","lineage":["https://openalex.org/I4210117458","https://openalex.org/I4210142220","https://openalex.org/I4210157859"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"C\u00e9lia Rasga","raw_affiliation_strings":["BioISI - Biosystems and Integrative Sciences Institute, Lisboa, Portugal","Instituto Nacional de Sa\u00fade Doutor Ricardo Jorge, Lisboa, Portugal"],"raw_orcid":"https://orcid.org/0000-0002-9969-6241","affiliations":[{"raw_affiliation_string":"BioISI - Biosystems and Integrative Sciences Institute, Lisboa, Portugal","institution_ids":[]},{"raw_affiliation_string":"Instituto Nacional de Sa\u00fade Doutor Ricardo Jorge, Lisboa, Portugal","institution_ids":["https://openalex.org/I4210142220"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102022189","display_name":"Astrid M. Vicente","orcid":"https://orcid.org/0000-0001-7134-8037"},"institutions":[{"id":"https://openalex.org/I4210142220","display_name":"National Institute of Health Dr. Ricardo Jorge","ror":"https://ror.org/03mx8d427","country_code":"PT","type":"other","lineage":["https://openalex.org/I4210117458","https://openalex.org/I4210142220","https://openalex.org/I4210157859"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Astrid Vicente","raw_affiliation_strings":["BioISI - Biosystems and Integrative Sciences Institute, Lisboa, Portugal","Instituto Nacional de Sa\u00fade Doutor Ricardo Jorge, Lisboa, Portugal"],"raw_orcid":"https://orcid.org/0000-0001-7134-8037","affiliations":[{"raw_affiliation_string":"BioISI - Biosystems and Integrative Sciences Institute, Lisboa, Portugal","institution_ids":[]},{"raw_affiliation_string":"Instituto Nacional de Sa\u00fade Doutor Ricardo Jorge, Lisboa, Portugal","institution_ids":["https://openalex.org/I4210142220"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5047928362","display_name":"Hugo Martiniano","orcid":"https://orcid.org/0000-0003-2490-8913"},"institutions":[{"id":"https://openalex.org/I4210142220","display_name":"National Institute of Health Dr. Ricardo Jorge","ror":"https://ror.org/03mx8d427","country_code":"PT","type":"other","lineage":["https://openalex.org/I4210117458","https://openalex.org/I4210142220","https://openalex.org/I4210157859"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Hugo Martiniano","raw_affiliation_strings":["BioISI - Biosystems and Integrative Sciences Institute, Lisboa, Portugal","Instituto Nacional de Sa\u00fade Doutor Ricardo Jorge, Lisboa, Portugal"],"raw_orcid":"https://orcid.org/0000-0003-2490-8913","affiliations":[{"raw_affiliation_string":"BioISI - Biosystems and Integrative Sciences Institute, Lisboa, Portugal","institution_ids":[]},{"raw_affiliation_string":"Instituto Nacional de Sa\u00fade Doutor Ricardo Jorge, Lisboa, Portugal","institution_ids":["https://openalex.org/I4210142220"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5067530600"],"corresponding_institution_ids":["https://openalex.org/I4210142220"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.5228,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.63173756,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"584","last_page":"595"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11273","display_name":"Advanced Graph Neural Networks","score":0.9894000291824341,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.9796000123023987,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6689203381538391},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.5334314107894897},{"id":"https://openalex.org/keywords/personalized-medicine","display_name":"Personalized medicine","score":0.49849915504455566},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4908502697944641},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.4709055423736572},{"id":"https://openalex.org/keywords/ensembl","display_name":"Ensembl","score":0.4618718922138214},{"id":"https://openalex.org/keywords/knowledge-extraction","display_name":"Knowledge extraction","score":0.4298091232776642},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.4250409007072449},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3014674782752991},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.28301525115966797},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2745768129825592},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.23758405447006226},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.1505410075187683},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.14712277054786682},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10973396897315979}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6689203381538391},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.5334314107894897},{"id":"https://openalex.org/C32220436","wikidata":"https://www.wikidata.org/wiki/Q2072214","display_name":"Personalized medicine","level":2,"score":0.49849915504455566},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4908502697944641},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.4709055423736572},{"id":"https://openalex.org/C141674004","wikidata":"https://www.wikidata.org/wiki/Q1344256","display_name":"Ensembl","level":5,"score":0.4618718922138214},{"id":"https://openalex.org/C120567893","wikidata":"https://www.wikidata.org/wiki/Q1582085","display_name":"Knowledge extraction","level":2,"score":0.4298091232776642},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.4250409007072449},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3014674782752991},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.28301525115966797},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2745768129825592},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.23758405447006226},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1505410075187683},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.14712277054786682},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10973396897315979},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-030-86230-5_46","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-86230-5_46","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:repositorio.insa.pt:10400.18/8070","is_oa":false,"landing_page_url":"http://hdl.handle.net/10400.18/8070","pdf_url":null,"source":{"id":"https://openalex.org/S4306400754","display_name":"Scientific Repository of the National Health Institute Doutor Ricardo Jorge (Instituto Nacional de Sa\u00fade Doutor Ricardo Jorge)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"conference object"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":22,"referenced_works":["https://openalex.org/W151377110","https://openalex.org/W1533230146","https://openalex.org/W1932504966","https://openalex.org/W2069713379","https://openalex.org/W2127795553","https://openalex.org/W2408186052","https://openalex.org/W2432356473","https://openalex.org/W2623056867","https://openalex.org/W2626606138","https://openalex.org/W2759136286","https://openalex.org/W2773163793","https://openalex.org/W2786672974","https://openalex.org/W2809184459","https://openalex.org/W2901568326","https://openalex.org/W2949676527","https://openalex.org/W3000892651","https://openalex.org/W3007807538","https://openalex.org/W3020639102","https://openalex.org/W3033896008","https://openalex.org/W3035403290","https://openalex.org/W3106442513","https://openalex.org/W3112880576"],"related_works":["https://openalex.org/W2156564520","https://openalex.org/W4307843054","https://openalex.org/W2104570606","https://openalex.org/W4210430020","https://openalex.org/W4250611210","https://openalex.org/W2112118427","https://openalex.org/W4205247356","https://openalex.org/W2464717012","https://openalex.org/W2565027272","https://openalex.org/W4248160505"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
