{"id":"https://openalex.org/W3169830490","doi":"https://doi.org/10.1007/978-3-030-85030-2_4","title":"Enforcing Morphological Information in Fully Convolutional Networks to Improve Cell Instance Segmentation in Fluorescence Microscopy Images","display_name":"Enforcing Morphological Information in Fully Convolutional Networks to Improve Cell Instance Segmentation in Fluorescence Microscopy Images","publication_year":2021,"publication_date":"2021-01-01","ids":{"openalex":"https://openalex.org/W3169830490","doi":"https://doi.org/10.1007/978-3-030-85030-2_4","mag":"3169830490"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-85030-2_4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-85030-2_4","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["arxiv","crossref","datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2106.05843","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5000884953","display_name":"Willard Zamora-C\u00e1rdenas","orcid":null},"institutions":[{"id":"https://openalex.org/I145372079","display_name":"Instituto Tecnol\u00f3gico de Costa Rica","ror":"https://ror.org/04zhrfn38","country_code":"CR","type":"education","lineage":["https://openalex.org/I145372079"]}],"countries":["CR"],"is_corresponding":false,"raw_author_name":"Willard Zamora-C\u00e1rdenas","raw_affiliation_strings":["Computing School, Costa Rica Institute of Technology, Cartago, Costa Rica"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computing School, Costa Rica Institute of Technology, Cartago, Costa Rica","institution_ids":["https://openalex.org/I145372079"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103118747","display_name":"Mauro Mendez","orcid":"https://orcid.org/0000-0002-5418-7005"},"institutions":[{"id":"https://openalex.org/I145372079","display_name":"Instituto Tecnol\u00f3gico de Costa Rica","ror":"https://ror.org/04zhrfn38","country_code":"CR","type":"education","lineage":["https://openalex.org/I145372079"]}],"countries":["CR"],"is_corresponding":false,"raw_author_name":"Mauro Mendez","raw_affiliation_strings":["Computing School, Costa Rica Institute of Technology, Cartago, Costa Rica"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computing School, Costa Rica Institute of Technology, Cartago, Costa Rica","institution_ids":["https://openalex.org/I145372079"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Saul Calderon-Ramirez","orcid":null},"institutions":[{"id":"https://openalex.org/I145372079","display_name":"Instituto Tecnol\u00f3gico de Costa Rica","ror":"https://ror.org/04zhrfn38","country_code":"CR","type":"education","lineage":["https://openalex.org/I145372079"]},{"id":"https://openalex.org/I66943878","display_name":"De Montfort University","ror":"https://ror.org/0312pnr83","country_code":"GB","type":"education","lineage":["https://openalex.org/I66943878"]}],"countries":["CR","GB"],"is_corresponding":false,"raw_author_name":"Saul Calderon-Ramirez","raw_affiliation_strings":["Computing School, Costa Rica Institute of Technology, Cartago, Costa Rica","Department of Computer Technology, De Montfort University, Leicester, UK","Costa Rica Institute of Technology"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computing School, Costa Rica Institute of Technology, Cartago, Costa Rica","institution_ids":["https://openalex.org/I145372079"]},{"raw_affiliation_string":"Department of Computer Technology, De Montfort University, Leicester, UK","institution_ids":["https://openalex.org/I66943878"]},{"raw_affiliation_string":"Costa Rica Institute of Technology","institution_ids":["https://openalex.org/I145372079"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110019182","display_name":"Martin Vargas","orcid":null},"institutions":[{"id":"https://openalex.org/I145372079","display_name":"Instituto Tecnol\u00f3gico de Costa Rica","ror":"https://ror.org/04zhrfn38","country_code":"CR","type":"education","lineage":["https://openalex.org/I145372079"]}],"countries":["CR"],"is_corresponding":false,"raw_author_name":"Martin Vargas","raw_affiliation_strings":["Computing School, Costa Rica Institute of Technology, Cartago, Costa Rica"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computing School, Costa Rica Institute of Technology, Cartago, Costa Rica","institution_ids":["https://openalex.org/I145372079"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061160777","display_name":"Gerardo Monge","orcid":null},"institutions":[{"id":"https://openalex.org/I145372079","display_name":"Instituto Tecnol\u00f3gico de Costa Rica","ror":"https://ror.org/04zhrfn38","country_code":"CR","type":"education","lineage":["https://openalex.org/I145372079"]}],"countries":["CR"],"is_corresponding":false,"raw_author_name":"Gerardo Monge","raw_affiliation_strings":["Computing School, Costa Rica Institute of Technology, Cartago, Costa Rica"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computing School, Costa Rica Institute of Technology, Cartago, Costa Rica","institution_ids":["https://openalex.org/I145372079"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014927083","display_name":"Steve Quir\u00f3s","orcid":"https://orcid.org/0000-0002-9377-0199"},"institutions":[{"id":"https://openalex.org/I31944674","display_name":"Universidad de Costa Rica","ror":"https://ror.org/02yzgww51","country_code":"CR","type":"education","lineage":["https://openalex.org/I31944674"]}],"countries":["CR"],"is_corresponding":false,"raw_author_name":"Steve Quiros","raw_affiliation_strings":["Tropical Diseases Research Center, Microbiology Faculty, University of Costa Rica, San Jose, Costa Rica"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Tropical Diseases Research Center, Microbiology Faculty, University of Costa Rica, San Jose, Costa Rica","institution_ids":["https://openalex.org/I31944674"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055283205","display_name":"David Elizondo","orcid":"https://orcid.org/0000-0002-7398-5870"},"institutions":[{"id":"https://openalex.org/I66943878","display_name":"De Montfort University","ror":"https://ror.org/0312pnr83","country_code":"GB","type":"education","lineage":["https://openalex.org/I66943878"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"David Elizondo","raw_affiliation_strings":["Department of Computer Technology, De Montfort University, Leicester, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Technology, De Montfort University, Leicester, UK","institution_ids":["https://openalex.org/I66943878"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Jordina Torrents-Barrena","orcid":null},"institutions":[{"id":"https://openalex.org/I55952717","display_name":"Universitat Rovira i Virgili","ror":"https://ror.org/00g5sqv46","country_code":"ES","type":"education","lineage":["https://openalex.org/I55952717"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Jordina Torrents-Barrena","raw_affiliation_strings":["Department of Computer Engineering and Mathematics, Rovira i Virgili University, Tarragona, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Engineering and Mathematics, Rovira i Virgili University, Tarragona, Spain","institution_ids":["https://openalex.org/I55952717"]}]},{"author_position":"last","author":{"id":null,"display_name":"Miguel A. Molina-Cabello","orcid":null},"institutions":[{"id":"https://openalex.org/I4210164724","display_name":"Instituto de Investigaci\u00f3n Biom\u00e9dica de M\u00e1laga","ror":"https://ror.org/05n3asa33","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210164724"]},{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Miguel A. Molina-Cabello","raw_affiliation_strings":["Department of Computer Languages and Computer Science, University of Malaga, M\u00e1laga, Spain","Instituto de Investigaci\u00f3n Biom\u00e9dica de M\u00e1laga \u2013 IBIMA, Malaga, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Languages and Computer Science, University of Malaga, M\u00e1laga, Spain","institution_ids":["https://openalex.org/I82767444"]},{"raw_affiliation_string":"Instituto de Investigaci\u00f3n Biom\u00e9dica de M\u00e1laga \u2013 IBIMA, Malaga, Spain","institution_ids":["https://openalex.org/I4210164724"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":6,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":3.5227,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.91447015,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"36","last_page":"46"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13114","display_name":"Image Processing Techniques and Applications","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/2214","display_name":"Media Technology"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.8250726461410522},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6733261346817017},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6339992880821228},{"id":"https://openalex.org/keywords/pixel","display_name":"Pixel","score":0.5733415484428406},{"id":"https://openalex.org/keywords/watershed","display_name":"Watershed","score":0.472891241312027},{"id":"https://openalex.org/keywords/tracking","display_name":"Tracking (education)","score":0.46753689646720886},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.46608278155326843},{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.4578385353088379},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.44966262578964233},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.42473748326301575},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.4209884703159332}],"concepts":[{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.8250726461410522},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6733261346817017},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6339992880821228},{"id":"https://openalex.org/C160633673","wikidata":"https://www.wikidata.org/wiki/Q355198","display_name":"Pixel","level":2,"score":0.5733415484428406},{"id":"https://openalex.org/C150547873","wikidata":"https://www.wikidata.org/wiki/Q947851","display_name":"Watershed","level":2,"score":0.472891241312027},{"id":"https://openalex.org/C2775936607","wikidata":"https://www.wikidata.org/wiki/Q466845","display_name":"Tracking (education)","level":2,"score":0.46753689646720886},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.46608278155326843},{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.4578385353088379},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.44966262578964233},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.42473748326301575},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.4209884703159332},{"id":"https://openalex.org/C19417346","wikidata":"https://www.wikidata.org/wiki/Q7922","display_name":"Pedagogy","level":1,"score":0.0},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1007/978-3-030-85030-2_4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-85030-2_4","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:arXiv.org:2106.05843","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2106.05843","pdf_url":"https://arxiv.org/pdf/2106.05843","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"mag:3169830490","is_oa":true,"landing_page_url":"https://arxiv.org/pdf/2106.05843","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"arXiv (Cornell University)","raw_type":null},{"id":"doi:10.48550/arxiv.2106.05843","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2106.05843","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Preprint"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2106.05843","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2106.05843","pdf_url":"https://arxiv.org/pdf/2106.05843","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":36,"referenced_works":["https://openalex.org/W56862299","https://openalex.org/W97452608","https://openalex.org/W1530694042","https://openalex.org/W1565402342","https://openalex.org/W1593426002","https://openalex.org/W1901129140","https://openalex.org/W1903029394","https://openalex.org/W2013054738","https://openalex.org/W2019062120","https://openalex.org/W2066592401","https://openalex.org/W2071516577","https://openalex.org/W2110218375","https://openalex.org/W2121189958","https://openalex.org/W2137117880","https://openalex.org/W2148743296","https://openalex.org/W2221898772","https://openalex.org/W2228896443","https://openalex.org/W2557889580","https://openalex.org/W2586629973","https://openalex.org/W2623152254","https://openalex.org/W2788562687","https://openalex.org/W2794285110","https://openalex.org/W2892646797","https://openalex.org/W2892812928","https://openalex.org/W2948759416","https://openalex.org/W2963150697","https://openalex.org/W2963352069","https://openalex.org/W3005840714","https://openalex.org/W3035578385","https://openalex.org/W3091347589","https://openalex.org/W3102109749","https://openalex.org/W3119948659","https://openalex.org/W3160095402","https://openalex.org/W3171929138","https://openalex.org/W4232808830","https://openalex.org/W6788530040"],"related_works":["https://openalex.org/W3196599239","https://openalex.org/W3048953762","https://openalex.org/W2944712585","https://openalex.org/W2522761331","https://openalex.org/W2956880270","https://openalex.org/W2912030980","https://openalex.org/W3027017053","https://openalex.org/W2963454900","https://openalex.org/W2948265816","https://openalex.org/W3135048202","https://openalex.org/W2807132203","https://openalex.org/W2965013520","https://openalex.org/W3014770361","https://openalex.org/W2980112230","https://openalex.org/W3012128277","https://openalex.org/W2974460650","https://openalex.org/W2970800669","https://openalex.org/W261791069","https://openalex.org/W2982498096","https://openalex.org/W2892354819"],"abstract_inverted_index":null,"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2022,"cited_by_count":1}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
