{"id":"https://openalex.org/W3175700716","doi":"https://doi.org/10.1007/978-3-030-78191-0_39","title":"3D Nucleus Instance Segmentation for Whole-Brain Microscopy Images","display_name":"3D Nucleus Instance Segmentation for Whole-Brain Microscopy Images","publication_year":2021,"publication_date":"2021-01-01","ids":{"openalex":"https://openalex.org/W3175700716","doi":"https://doi.org/10.1007/978-3-030-78191-0_39","mag":"3175700716"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-78191-0_39","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-78191-0_39","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5045938746","display_name":"Junbo Ma","orcid":"https://orcid.org/0000-0002-5859-8389"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Junbo Ma","raw_affiliation_strings":["Department of Psychiatry, The University of North Carolina At Chapel Hill, Chapel Hill, NC, 27514, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Psychiatry, The University of North Carolina At Chapel Hill, Chapel Hill, NC, 27514, USA","institution_ids":["https://openalex.org/I114027177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005750477","display_name":"Oleh Krupa","orcid":null},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Oleh Krupa","raw_affiliation_strings":["Department of Genetics, The University of North Carolina At Chapel Hill, Chapel Hill, NC, 27599, USA","UNC Neuroscience Center, The University of North Carolina At Chapel Hill, Chapel Hill, NC, 27599, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, The University of North Carolina At Chapel Hill, Chapel Hill, NC, 27599, USA","institution_ids":["https://openalex.org/I114027177"]},{"raw_affiliation_string":"UNC Neuroscience Center, The University of North Carolina At Chapel Hill, Chapel Hill, NC, 27599, USA","institution_ids":["https://openalex.org/I114027177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051859419","display_name":"Madison R. Glass","orcid":null},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Madison Rose Glass","raw_affiliation_strings":["Department of Genetics, The University of North Carolina At Chapel Hill, Chapel Hill, NC, 27599, USA","UNC Neuroscience Center, The University of North Carolina At Chapel Hill, Chapel Hill, NC, 27599, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, The University of North Carolina At Chapel Hill, Chapel Hill, NC, 27599, USA","institution_ids":["https://openalex.org/I114027177"]},{"raw_affiliation_string":"UNC Neuroscience Center, The University of North Carolina At Chapel Hill, Chapel Hill, NC, 27599, USA","institution_ids":["https://openalex.org/I114027177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067301510","display_name":"Carolyn M. McCormick","orcid":null},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Carolyn M. McCormick","raw_affiliation_strings":["Department of Genetics, The University of North Carolina At Chapel Hill, Chapel Hill, NC, 27599, USA","UNC Neuroscience Center, The University of North Carolina At Chapel Hill, Chapel Hill, NC, 27599, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, The University of North Carolina At Chapel Hill, Chapel Hill, NC, 27599, USA","institution_ids":["https://openalex.org/I114027177"]},{"raw_affiliation_string":"UNC Neuroscience Center, The University of North Carolina At Chapel Hill, Chapel Hill, NC, 27599, USA","institution_ids":["https://openalex.org/I114027177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001966756","display_name":"David Borland","orcid":"https://orcid.org/0000-0002-0162-4080"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]},{"id":"https://openalex.org/I69048370","display_name":"Renaissance Computing Institute","ror":"https://ror.org/01s91ey96","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I170897317","https://openalex.org/I69048370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David Borland","raw_affiliation_strings":["RENCI, The University of North Carolina At Chapel Hill, Chapel Hill, NC, 27599, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"RENCI, The University of North Carolina At Chapel Hill, Chapel Hill, NC, 27599, USA","institution_ids":["https://openalex.org/I114027177","https://openalex.org/I69048370"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100416234","display_name":"Minjeong Kim","orcid":"https://orcid.org/0009-0004-7712-1684"},"institutions":[{"id":"https://openalex.org/I169335092","display_name":"University of North Carolina at Greensboro","ror":"https://ror.org/04fnxsj42","country_code":"US","type":"education","lineage":["https://openalex.org/I169335092"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Minjeong Kim","raw_affiliation_strings":["Department of Computer Science, The University of North Carolina At Greensboro, Greensboro, NC, 27412, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, The University of North Carolina At Greensboro, Greensboro, NC, 27412, USA","institution_ids":["https://openalex.org/I169335092"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011912522","display_name":"Jason L. Stein","orcid":"https://orcid.org/0000-0003-4829-0513"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jason L. Stein","raw_affiliation_strings":["Department of Genetics, The University of North Carolina At Chapel Hill, Chapel Hill, NC, 27599, USA","UNC Neuroscience Center, The University of North Carolina At Chapel Hill, Chapel Hill, NC, 27599, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, The University of North Carolina At Chapel Hill, Chapel Hill, NC, 27599, USA","institution_ids":["https://openalex.org/I114027177"]},{"raw_affiliation_string":"UNC Neuroscience Center, The University of North Carolina At Chapel Hill, Chapel Hill, NC, 27599, USA","institution_ids":["https://openalex.org/I114027177"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5021809690","display_name":"Guorong Wu","orcid":"https://orcid.org/0000-0002-0550-6145"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Guorong Wu","raw_affiliation_strings":["Department of Computer Science, The University of North Carolina At Chapel Hill, Chapel Hill, NC, 27514, USA","Department of Psychiatry, The University of North Carolina At Chapel Hill, Chapel Hill, NC, 27514, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, The University of North Carolina At Chapel Hill, Chapel Hill, NC, 27514, USA","institution_ids":["https://openalex.org/I114027177"]},{"raw_affiliation_string":"Department of Psychiatry, The University of North Carolina At Chapel Hill, Chapel Hill, NC, 27514, USA","institution_ids":["https://openalex.org/I114027177"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5021809690"],"corresponding_institution_ids":["https://openalex.org/I114027177"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":1.1735,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.7859064,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"504","last_page":"516"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13114","display_name":"Image Processing Techniques and Applications","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/2214","display_name":"Media Technology"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7720032930374146},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6566941738128662},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.6414721608161926},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.6005640625953674},{"id":"https://openalex.org/keywords/nucleus","display_name":"Nucleus","score":0.5589712858200073},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.4969799816608429},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.48303326964378357},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.36881276965141296},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.17176362872123718},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.08466634154319763}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7720032930374146},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6566941738128662},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.6414721608161926},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.6005640625953674},{"id":"https://openalex.org/C2780723820","wikidata":"https://www.wikidata.org/wiki/Q1934178","display_name":"Nucleus","level":2,"score":0.5589712858200073},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.4969799816608429},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.48303326964378357},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.36881276965141296},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.17176362872123718},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.08466634154319763},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-030-78191-0_39","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-78191-0_39","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/1","display_name":"No poverty","score":0.6600000262260437}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":20,"referenced_works":["https://openalex.org/W1536680647","https://openalex.org/W1603300429","https://openalex.org/W1959608418","https://openalex.org/W2051438014","https://openalex.org/W2142343738","https://openalex.org/W2476548250","https://openalex.org/W2738546406","https://openalex.org/W2783584852","https://openalex.org/W2909240409","https://openalex.org/W2953920664","https://openalex.org/W2963150697","https://openalex.org/W2980471673","https://openalex.org/W2989929945","https://openalex.org/W2991915699","https://openalex.org/W2998291867","https://openalex.org/W3023371261","https://openalex.org/W3034781633","https://openalex.org/W3093569261","https://openalex.org/W3095323785","https://openalex.org/W3122698290"],"related_works":["https://openalex.org/W4375867731","https://openalex.org/W2611989081","https://openalex.org/W2888410021","https://openalex.org/W4230611425","https://openalex.org/W2731899572","https://openalex.org/W3105960816","https://openalex.org/W656191827","https://openalex.org/W4304166257","https://openalex.org/W2481512212","https://openalex.org/W4315434538"],"abstract_inverted_index":null,"counts_by_year":[{"year":2023,"cited_by_count":1}],"updated_date":"2026-08-04T08:18:43.703281","created_date":"2025-10-10T00:00:00"}
