{"id":"https://openalex.org/W3123538228","doi":"https://doi.org/10.1007/978-3-030-72113-8_30","title":"Drug and Disease Interpretation Learning with Biomedical Entity Representation Transformer","display_name":"Drug and Disease Interpretation Learning with Biomedical Entity Representation Transformer","publication_year":2021,"publication_date":"2021-01-01","ids":{"openalex":"https://openalex.org/W3123538228","doi":"https://doi.org/10.1007/978-3-030-72113-8_30","mag":"3123538228"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-72113-8_30","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-72113-8_30","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["arxiv","crossref","datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2101.09311","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5078878309","display_name":"Zulfat Miftahutdinov","orcid":null},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Zulfat Miftahutdinov","raw_affiliation_strings":["Insilico Medicine Hong Kong, Pak Shek Kok, Hong Kong"],"raw_orcid":"https://orcid.org/0000-0002-8467-4824","affiliations":[{"raw_affiliation_string":"Insilico Medicine Hong Kong, Pak Shek Kok, Hong Kong","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019867253","display_name":"Artur Kadurin","orcid":"https://orcid.org/0000-0003-1482-9365"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Artur Kadurin","raw_affiliation_strings":["Insilico Medicine Hong Kong, Pak Shek Kok, Hong Kong"],"raw_orcid":"https://orcid.org/0000-0003-1482-9365","affiliations":[{"raw_affiliation_string":"Insilico Medicine Hong Kong, Pak Shek Kok, Hong Kong","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042409543","display_name":"Roman Kudrin","orcid":"https://orcid.org/0000-0002-9741-0043"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Roman Kudrin","raw_affiliation_strings":["Insilico Medicine Hong Kong, Pak Shek Kok, Hong Kong"],"raw_orcid":"https://orcid.org/0000-0002-9741-0043","affiliations":[{"raw_affiliation_string":"Insilico Medicine Hong Kong, Pak Shek Kok, Hong Kong","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5012311258","display_name":"Elena Tutubalina","orcid":"https://orcid.org/0000-0001-7936-0284"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Elena Tutubalina","raw_affiliation_strings":["Insilico Medicine Hong Kong, Pak Shek Kok, Hong Kong"],"raw_orcid":"https://orcid.org/0000-0001-7936-0284","affiliations":[{"raw_affiliation_string":"Insilico Medicine Hong Kong, Pak Shek Kok, Hong Kong","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":["https://openalex.org/A5078878309"],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.00913798,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"451","last_page":"466"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9948999881744385,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7283163666725159},{"id":"https://openalex.org/keywords/entity-linking","display_name":"Entity linking","score":0.6130689382553101},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5854051113128662},{"id":"https://openalex.org/keywords/normalization","display_name":"Normalization (sociology)","score":0.5783928036689758},{"id":"https://openalex.org/keywords/transformer","display_name":"Transformer","score":0.5631067752838135},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.5495619773864746},{"id":"https://openalex.org/keywords/named-entity-recognition","display_name":"Named-entity recognition","score":0.5067604184150696},{"id":"https://openalex.org/keywords/feature-learning","display_name":"Feature learning","score":0.4853936433792114},{"id":"https://openalex.org/keywords/embedding","display_name":"Embedding","score":0.4709385633468628},{"id":"https://openalex.org/keywords/encoder","display_name":"Encoder","score":0.45826321840286255},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4551626443862915},{"id":"https://openalex.org/keywords/feature-vector","display_name":"Feature vector","score":0.4339353144168854},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.33082664012908936},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.16340240836143494},{"id":"https://openalex.org/keywords/knowledge-base","display_name":"Knowledge base","score":0.1586347222328186}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7283163666725159},{"id":"https://openalex.org/C96711827","wikidata":"https://www.wikidata.org/wiki/Q17012245","display_name":"Entity linking","level":3,"score":0.6130689382553101},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5854051113128662},{"id":"https://openalex.org/C136886441","wikidata":"https://www.wikidata.org/wiki/Q926129","display_name":"Normalization (sociology)","level":2,"score":0.5783928036689758},{"id":"https://openalex.org/C66322947","wikidata":"https://www.wikidata.org/wiki/Q11658","display_name":"Transformer","level":3,"score":0.5631067752838135},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.5495619773864746},{"id":"https://openalex.org/C2779135771","wikidata":"https://www.wikidata.org/wiki/Q403574","display_name":"Named-entity recognition","level":3,"score":0.5067604184150696},{"id":"https://openalex.org/C59404180","wikidata":"https://www.wikidata.org/wiki/Q17013334","display_name":"Feature learning","level":2,"score":0.4853936433792114},{"id":"https://openalex.org/C41608201","wikidata":"https://www.wikidata.org/wiki/Q980509","display_name":"Embedding","level":2,"score":0.4709385633468628},{"id":"https://openalex.org/C118505674","wikidata":"https://www.wikidata.org/wiki/Q42586063","display_name":"Encoder","level":2,"score":0.45826321840286255},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4551626443862915},{"id":"https://openalex.org/C83665646","wikidata":"https://www.wikidata.org/wiki/Q42139305","display_name":"Feature vector","level":2,"score":0.4339353144168854},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.33082664012908936},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.16340240836143494},{"id":"https://openalex.org/C4554734","wikidata":"https://www.wikidata.org/wiki/Q593744","display_name":"Knowledge base","level":2,"score":0.1586347222328186},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C165801399","wikidata":"https://www.wikidata.org/wiki/Q25428","display_name":"Voltage","level":2,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C19165224","wikidata":"https://www.wikidata.org/wiki/Q23404","display_name":"Anthropology","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1007/978-3-030-72113-8_30","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-72113-8_30","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:arXiv.org:2101.09311","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2101.09311","pdf_url":"https://arxiv.org/pdf/2101.09311","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"mag:3123538228","is_oa":true,"landing_page_url":"https://arxiv.org/pdf/2101.09311.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"arXiv (Cornell University)","raw_type":null},{"id":"doi:10.48550/arxiv.2101.09311","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2101.09311","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Preprint"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2101.09311","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2101.09311","pdf_url":"https://arxiv.org/pdf/2101.09311","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},"sustainable_development_goals":[{"score":0.47999998927116394,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":57,"referenced_works":["https://openalex.org/W1550258693","https://openalex.org/W1964189668","https://openalex.org/W1983183415","https://openalex.org/W2059627632","https://openalex.org/W2071021089","https://openalex.org/W2084413241","https://openalex.org/W2095569536","https://openalex.org/W2096733369","https://openalex.org/W2096951189","https://openalex.org/W2134689819","https://openalex.org/W2136189984","https://openalex.org/W2143902665","https://openalex.org/W2149151184","https://openalex.org/W2153579005","https://openalex.org/W2158743996","https://openalex.org/W2159583324","https://openalex.org/W2170146596","https://openalex.org/W2251403365","https://openalex.org/W2328582909","https://openalex.org/W2346452181","https://openalex.org/W2398645150","https://openalex.org/W2414378847","https://openalex.org/W2461620095","https://openalex.org/W2464743837","https://openalex.org/W2521782434","https://openalex.org/W2574633938","https://openalex.org/W2577790096","https://openalex.org/W2593864460","https://openalex.org/W2612436700","https://openalex.org/W2754689471","https://openalex.org/W2763990719","https://openalex.org/W2778100917","https://openalex.org/W2808598571","https://openalex.org/W2887089350","https://openalex.org/W2911489562","https://openalex.org/W2915128229","https://openalex.org/W2916047525","https://openalex.org/W2942692776","https://openalex.org/W2949845972","https://openalex.org/W2952958555","https://openalex.org/W2963341956","https://openalex.org/W2963454409","https://openalex.org/W2963558486","https://openalex.org/W2963775347","https://openalex.org/W2969574947","https://openalex.org/W2970641574","https://openalex.org/W2971690404","https://openalex.org/W2987249037","https://openalex.org/W2990074448","https://openalex.org/W2997303394","https://openalex.org/W3022486637","https://openalex.org/W3034229721","https://openalex.org/W3098115739","https://openalex.org/W3099206234","https://openalex.org/W3116070535","https://openalex.org/W6601052344","https://openalex.org/W6745479485"],"related_works":["https://openalex.org/W3148870739","https://openalex.org/W3033528290","https://openalex.org/W3082065842","https://openalex.org/W3173376018","https://openalex.org/W2735137317","https://openalex.org/W2466511670","https://openalex.org/W3209302286","https://openalex.org/W3147048560","https://openalex.org/W2998616814","https://openalex.org/W2786609308","https://openalex.org/W2780899891","https://openalex.org/W3080238567","https://openalex.org/W2768029601","https://openalex.org/W2740705807","https://openalex.org/W3042027188","https://openalex.org/W2894910307","https://openalex.org/W2993436875","https://openalex.org/W2777588166","https://openalex.org/W2968862197","https://openalex.org/W3004824158"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-08-05T07:39:15.569665","created_date":"2025-10-10T00:00:00"}
