{"id":"https://openalex.org/W3110785793","doi":"https://doi.org/10.1007/978-3-030-63061-4_19","title":"Integration of Single-Cell RNA-Sequencing Data into Flux Balance Cellular Automata","display_name":"Integration of Single-Cell RNA-Sequencing Data into Flux Balance Cellular Automata","publication_year":2020,"publication_date":"2020-01-01","ids":{"openalex":"https://openalex.org/W3110785793","doi":"https://doi.org/10.1007/978-3-030-63061-4_19","mag":"3110785793"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-63061-4_19","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-63061-4_19","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5038449865","display_name":"Davide Maspero","orcid":"https://orcid.org/0000-0001-8519-4331"},"institutions":[{"id":"https://openalex.org/I4210095629","display_name":"Institute of Molecular Bioimaging and Physiology","ror":"https://ror.org/00s2j5046","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210095629","https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I4210156707","display_name":"Fondazione IRCCS Istituto Nazionale dei Tumori","ror":"https://ror.org/05dwj7825","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210153126","https://openalex.org/I4210156707"]},{"id":"https://openalex.org/I66752286","display_name":"University of Milano-Bicocca","ror":"https://ror.org/01ynf4891","country_code":"IT","type":"education","lineage":["https://openalex.org/I66752286"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Davide Maspero","raw_affiliation_strings":["Department of Informatics, Systems and Communication, University of Milan-Bicocca, Milan, Italy","Fondazione IRCCS Istituto Nazionale dei Tumori, Milan, Italy","Institute of Molecular Bioimaging and Physiology, CNR, Segrate, Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Informatics, Systems and Communication, University of Milan-Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]},{"raw_affiliation_string":"Fondazione IRCCS Istituto Nazionale dei Tumori, Milan, Italy","institution_ids":["https://openalex.org/I4210156707"]},{"raw_affiliation_string":"Institute of Molecular Bioimaging and Physiology, CNR, Segrate, Milan, Italy","institution_ids":["https://openalex.org/I4210095629"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037716718","display_name":"Marzia Di Filippo","orcid":"https://orcid.org/0000-0002-7428-0522"},"institutions":[{"id":"https://openalex.org/I66752286","display_name":"University of Milano-Bicocca","ror":"https://ror.org/01ynf4891","country_code":"IT","type":"education","lineage":["https://openalex.org/I66752286"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Marzia Di Filippo","raw_affiliation_strings":["Department of Statistics and Quantitative Methods, University of Milan-Bicocca, Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Statistics and Quantitative Methods, University of Milan-Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049467276","display_name":"Fabrizio Angaroni","orcid":"https://orcid.org/0000-0002-3375-6686"},"institutions":[{"id":"https://openalex.org/I66752286","display_name":"University of Milano-Bicocca","ror":"https://ror.org/01ynf4891","country_code":"IT","type":"education","lineage":["https://openalex.org/I66752286"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Fabrizio Angaroni","raw_affiliation_strings":["Department of Informatics, Systems and Communication, University of Milan-Bicocca, Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Informatics, Systems and Communication, University of Milan-Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065568541","display_name":"Dario Pescini","orcid":"https://orcid.org/0000-0002-3090-4823"},"institutions":[{"id":"https://openalex.org/I66752286","display_name":"University of Milano-Bicocca","ror":"https://ror.org/01ynf4891","country_code":"IT","type":"education","lineage":["https://openalex.org/I66752286"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Dario Pescini","raw_affiliation_strings":["Department of Statistics and Quantitative Methods, University of Milan-Bicocca, Milan, Italy","SYSBIO Centre of Systems Biology, University of Milan-Bicocca, Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Statistics and Quantitative Methods, University of Milan-Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]},{"raw_affiliation_string":"SYSBIO Centre of Systems Biology, University of Milan-Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073163964","display_name":"Giancarlo Mauri","orcid":"https://orcid.org/0000-0003-3520-4022"},"institutions":[{"id":"https://openalex.org/I66752286","display_name":"University of Milano-Bicocca","ror":"https://ror.org/01ynf4891","country_code":"IT","type":"education","lineage":["https://openalex.org/I66752286"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Giancarlo Mauri","raw_affiliation_strings":["Department of Informatics, Systems and Communication, University of Milan-Bicocca, Milan, Italy","SYSBIO Centre of Systems Biology, University of Milan-Bicocca, Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Informatics, Systems and Communication, University of Milan-Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]},{"raw_affiliation_string":"SYSBIO Centre of Systems Biology, University of Milan-Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063056739","display_name":"Marco Vanoni","orcid":"https://orcid.org/0000-0002-8690-2587"},"institutions":[{"id":"https://openalex.org/I66752286","display_name":"University of Milano-Bicocca","ror":"https://ror.org/01ynf4891","country_code":"IT","type":"education","lineage":["https://openalex.org/I66752286"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Marco Vanoni","raw_affiliation_strings":["Department of Biotechnology and Biosciences, University of Milan-Bicocca, Milan, Italy","SYSBIO Centre of Systems Biology, University of Milan-Bicocca, Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biotechnology and Biosciences, University of Milan-Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]},{"raw_affiliation_string":"SYSBIO Centre of Systems Biology, University of Milan-Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055916343","display_name":"Alex Graudenzi","orcid":"https://orcid.org/0000-0001-5452-1918"},"institutions":[{"id":"https://openalex.org/I4210095629","display_name":"Institute of Molecular Bioimaging and Physiology","ror":"https://ror.org/00s2j5046","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210095629","https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I66752286","display_name":"University of Milano-Bicocca","ror":"https://ror.org/01ynf4891","country_code":"IT","type":"education","lineage":["https://openalex.org/I66752286"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Alex Graudenzi","raw_affiliation_strings":["Department of Informatics, Systems and Communication, University of Milan-Bicocca, Milan, Italy","Institute of Molecular Bioimaging and Physiology, CNR, Segrate, Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Informatics, Systems and Communication, University of Milan-Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]},{"raw_affiliation_string":"Institute of Molecular Bioimaging and Physiology, CNR, Segrate, Milan, Italy","institution_ids":["https://openalex.org/I4210095629"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5107211303","display_name":"C. Damiani","orcid":null},"institutions":[{"id":"https://openalex.org/I66752286","display_name":"University of Milano-Bicocca","ror":"https://ror.org/01ynf4891","country_code":"IT","type":"education","lineage":["https://openalex.org/I66752286"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Chiara Damiani","raw_affiliation_strings":["Department of Biotechnology and Biosciences, University of Milan-Bicocca, Milan, Italy","SYSBIO Centre of Systems Biology, University of Milan-Bicocca, Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biotechnology and Biosciences, University of Milan-Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]},{"raw_affiliation_string":"SYSBIO Centre of Systems Biology, University of Milan-Bicocca, Milan, Italy","institution_ids":["https://openalex.org/I66752286"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5055916343","https://openalex.org/A5107211303"],"corresponding_institution_ids":["https://openalex.org/I4210095629","https://openalex.org/I66752286"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.7346,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.7410821,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"207","last_page":"215"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9829000234603882,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cellular-automaton","display_name":"Cellular automaton","score":0.7945722341537476},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7087782621383667},{"id":"https://openalex.org/keywords/synchronization","display_name":"Synchronization (alternating current)","score":0.5742786526679993},{"id":"https://openalex.org/keywords/flux","display_name":"Flux (metallurgy)","score":0.5343358516693115},{"id":"https://openalex.org/keywords/flux-balance-analysis","display_name":"Flux balance analysis","score":0.5233637094497681},{"id":"https://openalex.org/keywords/cellular-metabolism","display_name":"Cellular metabolism","score":0.4610082507133484},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.4604736864566803},{"id":"https://openalex.org/keywords/dynamics","display_name":"Dynamics (music)","score":0.42342495918273926},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.3876987099647522},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.35208606719970703},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2556440830230713},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.15985152125358582},{"id":"https://openalex.org/keywords/metabolism","display_name":"Metabolism","score":0.14501607418060303},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.1364160180091858},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.08660361170768738},{"id":"https://openalex.org/keywords/telecommunications","display_name":"Telecommunications","score":0.07302510738372803}],"concepts":[{"id":"https://openalex.org/C35527583","wikidata":"https://www.wikidata.org/wiki/Q189156","display_name":"Cellular automaton","level":2,"score":0.7945722341537476},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7087782621383667},{"id":"https://openalex.org/C2778562939","wikidata":"https://www.wikidata.org/wiki/Q1298791","display_name":"Synchronization (alternating current)","level":3,"score":0.5742786526679993},{"id":"https://openalex.org/C68709404","wikidata":"https://www.wikidata.org/wiki/Q1134475","display_name":"Flux (metallurgy)","level":2,"score":0.5343358516693115},{"id":"https://openalex.org/C167091322","wikidata":"https://www.wikidata.org/wiki/Q5463029","display_name":"Flux balance analysis","level":2,"score":0.5233637094497681},{"id":"https://openalex.org/C2994212657","wikidata":"https://www.wikidata.org/wiki/Q1057","display_name":"Cellular metabolism","level":3,"score":0.4610082507133484},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.4604736864566803},{"id":"https://openalex.org/C145912823","wikidata":"https://www.wikidata.org/wiki/Q113558","display_name":"Dynamics (music)","level":2,"score":0.42342495918273926},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.3876987099647522},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.35208606719970703},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2556440830230713},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.15985152125358582},{"id":"https://openalex.org/C62231903","wikidata":"https://www.wikidata.org/wiki/Q1057","display_name":"Metabolism","level":2,"score":0.14501607418060303},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.1364160180091858},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.08660361170768738},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.07302510738372803},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C134018914","wikidata":"https://www.wikidata.org/wiki/Q162606","display_name":"Endocrinology","level":1,"score":0.0},{"id":"https://openalex.org/C127162648","wikidata":"https://www.wikidata.org/wiki/Q16858953","display_name":"Channel (broadcasting)","level":2,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-030-63061-4_19","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-63061-4_19","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:boa.unimib.it:10281/300664","is_oa":false,"landing_page_url":"http://hdl.handle.net/10281/300664","pdf_url":null,"source":{"id":"https://openalex.org/S4306401259","display_name":"BOA (University of Milano-Bicocca)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I66752286","host_organization_name":"University of Milano-Bicocca","host_organization_lineage":["https://openalex.org/I66752286"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/conferenceObject"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.5,"id":"https://metadata.un.org/sdg/15","display_name":"Life in Land"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":11,"referenced_works":["https://openalex.org/W1489022082","https://openalex.org/W2078355959","https://openalex.org/W2272140989","https://openalex.org/W2302302500","https://openalex.org/W2888039342","https://openalex.org/W2920146178","https://openalex.org/W2947966895","https://openalex.org/W2949647620","https://openalex.org/W2990200702","https://openalex.org/W2996962122","https://openalex.org/W4244467330"],"related_works":["https://openalex.org/W1971436540","https://openalex.org/W2020641517","https://openalex.org/W2888039342","https://openalex.org/W3033588432","https://openalex.org/W2216418212","https://openalex.org/W2075919068","https://openalex.org/W4253883836","https://openalex.org/W2540651481","https://openalex.org/W1544925715","https://openalex.org/W2594933406"],"abstract_inverted_index":null,"counts_by_year":[{"year":2022,"cited_by_count":1}],"updated_date":"2026-08-04T08:18:43.703281","created_date":"2020-12-21T00:00:00"}
