{"id":"https://openalex.org/W3000368539","doi":"https://doi.org/10.1007/978-3-030-59722-1_15","title":"DISCo: Deep Learning, Instance Segmentation, and Correlations for Cell Segmentation in Calcium Imaging","display_name":"DISCo: Deep Learning, Instance Segmentation, and Correlations for Cell Segmentation in Calcium Imaging","publication_year":2020,"publication_date":"2020-01-01","ids":{"openalex":"https://openalex.org/W3000368539","doi":"https://doi.org/10.1007/978-3-030-59722-1_15","mag":"3000368539"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-59722-1_15","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-59722-1_15","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["arxiv","crossref","datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/1908.07957","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5043055483","display_name":"Elke Kirschbaum","orcid":null},"institutions":[{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]},{"id":"https://openalex.org/I4210089985","display_name":"Amazon (Germany)","ror":"https://ror.org/00b9ktm87","country_code":"DE","type":"company","lineage":["https://openalex.org/I1311688040","https://openalex.org/I4210089985"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Elke Kirschbaum","raw_affiliation_strings":["Amazon Research, T\u00fcbingen, Germany","Interdisciplinary Center for Scientific Computing (IWR), Heidelberg University, Heidelberg, Germany","Heidelberg University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Amazon Research, T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I4210089985"]},{"raw_affiliation_string":"Interdisciplinary Center for Scientific Computing (IWR), Heidelberg University, Heidelberg, Germany","institution_ids":["https://openalex.org/I223822909"]},{"raw_affiliation_string":"Heidelberg University","institution_ids":["https://openalex.org/I223822909"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029291582","display_name":"Alberto Bailoni","orcid":"https://orcid.org/0000-0002-0569-8044"},"institutions":[{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Alberto Bailoni","raw_affiliation_strings":["Interdisciplinary Center for Scientific Computing (IWR), Heidelberg University, Heidelberg, Germany","Heidelberg University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Interdisciplinary Center for Scientific Computing (IWR), Heidelberg University, Heidelberg, Germany","institution_ids":["https://openalex.org/I223822909"]},{"raw_affiliation_string":"Heidelberg University","institution_ids":["https://openalex.org/I223822909"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5020048224","display_name":"Fred A. Hamprecht","orcid":"https://orcid.org/0000-0003-4148-5043"},"institutions":[{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Fred A. Hamprecht","raw_affiliation_strings":["Interdisciplinary Center for Scientific Computing (IWR), Heidelberg University, Heidelberg, Germany","Heidelberg University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Interdisciplinary Center for Scientific Computing (IWR), Heidelberg University, Heidelberg, Germany","institution_ids":["https://openalex.org/I223822909"]},{"raw_affiliation_string":"Heidelberg University","institution_ids":["https://openalex.org/I223822909"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5043055483"],"corresponding_institution_ids":["https://openalex.org/I223822909","https://openalex.org/I4210089985"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.00457816,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"151","last_page":"162"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9915000200271606,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10036","display_name":"Advanced Neural Network Applications","score":0.9897000193595886,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.7071089148521423},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6642038822174072},{"id":"https://openalex.org/keywords/calcium-imaging","display_name":"Calcium imaging","score":0.6246949434280396},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6108618378639221},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.5949282050132751},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.5473209023475647},{"id":"https://openalex.org/keywords/pixel","display_name":"Pixel","score":0.547319233417511},{"id":"https://openalex.org/keywords/grid-cell","display_name":"Grid cell","score":0.49755266308784485},{"id":"https://openalex.org/keywords/neurophysiology","display_name":"Neurophysiology","score":0.4723937213420868},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.4372163414955139},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.4283030033111572},{"id":"https://openalex.org/keywords/partition","display_name":"Partition (number theory)","score":0.4262581467628479},{"id":"https://openalex.org/keywords/grid","display_name":"Grid","score":0.34619608521461487},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.33907556533813477},{"id":"https://openalex.org/keywords/calcium","display_name":"Calcium","score":0.2813761234283447},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.14605194330215454},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.13614124059677124},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.10199540853500366},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.08971339464187622}],"concepts":[{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.7071089148521423},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6642038822174072},{"id":"https://openalex.org/C2776032975","wikidata":"https://www.wikidata.org/wiki/Q5018833","display_name":"Calcium imaging","level":3,"score":0.6246949434280396},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6108618378639221},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.5949282050132751},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.5473209023475647},{"id":"https://openalex.org/C160633673","wikidata":"https://www.wikidata.org/wiki/Q355198","display_name":"Pixel","level":2,"score":0.547319233417511},{"id":"https://openalex.org/C2983008078","wikidata":"https://www.wikidata.org/wiki/Q863495","display_name":"Grid cell","level":3,"score":0.49755266308784485},{"id":"https://openalex.org/C152478114","wikidata":"https://www.wikidata.org/wiki/Q660910","display_name":"Neurophysiology","level":2,"score":0.4723937213420868},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.4372163414955139},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.4283030033111572},{"id":"https://openalex.org/C42812","wikidata":"https://www.wikidata.org/wiki/Q1082910","display_name":"Partition (number theory)","level":2,"score":0.4262581467628479},{"id":"https://openalex.org/C187691185","wikidata":"https://www.wikidata.org/wiki/Q2020720","display_name":"Grid","level":2,"score":0.34619608521461487},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.33907556533813477},{"id":"https://openalex.org/C519063684","wikidata":"https://www.wikidata.org/wiki/Q706","display_name":"Calcium","level":2,"score":0.2813761234283447},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.14605194330215454},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.13614124059677124},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.10199540853500366},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.08971339464187622},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1007/978-3-030-59722-1_15","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-59722-1_15","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:arXiv.org:1908.07957","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1908.07957","pdf_url":"https://arxiv.org/pdf/1908.07957","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"mag:3000368539","is_oa":true,"landing_page_url":"https://arxiv.org/pdf/1908.07957v4","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"arXiv (Cornell University)","raw_type":null},{"id":"doi:10.48550/arxiv.1908.07957","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.1908.07957","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Preprint"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:1908.07957","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1908.07957","pdf_url":"https://arxiv.org/pdf/1908.07957","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":45,"referenced_works":["https://openalex.org/W421393966","https://openalex.org/W875731594","https://openalex.org/W1522301498","https://openalex.org/W1865012405","https://openalex.org/W1901129140","https://openalex.org/W1933420946","https://openalex.org/W1987869189","https://openalex.org/W1993355218","https://openalex.org/W1995360097","https://openalex.org/W2033708119","https://openalex.org/W2036887984","https://openalex.org/W2061464631","https://openalex.org/W2094045132","https://openalex.org/W2101737005","https://openalex.org/W2107617294","https://openalex.org/W2118128164","https://openalex.org/W2121947440","https://openalex.org/W2123480521","https://openalex.org/W2130133380","https://openalex.org/W2132067227","https://openalex.org/W2147607085","https://openalex.org/W2157774966","https://openalex.org/W2231009150","https://openalex.org/W2397643408","https://openalex.org/W2469581795","https://openalex.org/W2595012769","https://openalex.org/W2599765304","https://openalex.org/W2611775752","https://openalex.org/W2739126885","https://openalex.org/W2743961201","https://openalex.org/W2749300076","https://openalex.org/W2751966825","https://openalex.org/W2753811918","https://openalex.org/W2791680898","https://openalex.org/W2805271873","https://openalex.org/W2809992637","https://openalex.org/W2895933766","https://openalex.org/W2936929958","https://openalex.org/W2951253601","https://openalex.org/W2956039025","https://openalex.org/W2963426458","https://openalex.org/W2963621587","https://openalex.org/W2963717178","https://openalex.org/W3105014772","https://openalex.org/W3106063097"],"related_works":["https://openalex.org/W2955828465","https://openalex.org/W1961881037","https://openalex.org/W3164243367","https://openalex.org/W2952218918","https://openalex.org/W3037962818","https://openalex.org/W2914162368","https://openalex.org/W2994528761","https://openalex.org/W3099193570","https://openalex.org/W3209908406","https://openalex.org/W3109519758","https://openalex.org/W2955521425","https://openalex.org/W2939637627","https://openalex.org/W2921676720","https://openalex.org/W3008301614","https://openalex.org/W2963599420","https://openalex.org/W2806190463","https://openalex.org/W3128866328","https://openalex.org/W2964254867","https://openalex.org/W3207217988","https://openalex.org/W3115100961"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-08-05T07:39:15.569665","created_date":"2025-10-10T00:00:00"}
