{"id":"https://openalex.org/W3086680826","doi":"https://doi.org/10.1007/978-3-030-59722-1_10","title":"Microtubule Tracking in Electron Microscopy Volumes","display_name":"Microtubule Tracking in Electron Microscopy Volumes","publication_year":2020,"publication_date":"2020-01-01","ids":{"openalex":"https://openalex.org/W3086680826","doi":"https://doi.org/10.1007/978-3-030-59722-1_10","mag":"3086680826"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-59722-1_10","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-59722-1_10","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"preprint","indexed_in":["arxiv","crossref","datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2009.08371","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5012550882","display_name":"Nils Eckstein","orcid":"https://orcid.org/0000-0003-2226-8174"},"institutions":[{"id":"https://openalex.org/I195573530","display_name":"Janelia Research Campus","ror":"https://ror.org/013sk6x84","country_code":"US","type":"facility","lineage":["https://openalex.org/I1344073410","https://openalex.org/I195573530"]},{"id":"https://openalex.org/I1344073410","display_name":"Howard Hughes Medical Institute","ror":"https://ror.org/006w34k90","country_code":"US","type":"facility","lineage":["https://openalex.org/I1344073410"]},{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"funder","lineage":["https://openalex.org/I12708293"]}],"countries":["CH","US"],"is_corresponding":true,"raw_author_name":"Nils Eckstein","raw_affiliation_strings":["HHMI Janelia Research Campus, Ashburn, USA","Institute of Neuroinformatics UZH/ETHZ, Zurich, Switzerland","*Howard Hughes Medical Institute,"],"affiliations":[{"raw_affiliation_string":"HHMI Janelia Research Campus, Ashburn, USA","institution_ids":["https://openalex.org/I195573530"]},{"raw_affiliation_string":"Institute of Neuroinformatics UZH/ETHZ, Zurich, Switzerland","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"*Howard Hughes Medical Institute,","institution_ids":["https://openalex.org/I1344073410"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044921774","display_name":"Julia Buhmann","orcid":null},"institutions":[{"id":"https://openalex.org/I195573530","display_name":"Janelia Research Campus","ror":"https://ror.org/013sk6x84","country_code":"US","type":"facility","lineage":["https://openalex.org/I1344073410","https://openalex.org/I195573530"]},{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"funder","lineage":["https://openalex.org/I12708293"]}],"countries":["CH","US"],"is_corresponding":false,"raw_author_name":"Julia Buhmann","raw_affiliation_strings":["HHMI Janelia Research Campus, Ashburn, USA","Institute of Neuroinformatics UZH/ETHZ, Zurich, Switzerland"],"affiliations":[{"raw_affiliation_string":"HHMI Janelia Research Campus, Ashburn, USA","institution_ids":["https://openalex.org/I195573530"]},{"raw_affiliation_string":"Institute of Neuroinformatics UZH/ETHZ, Zurich, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011103736","display_name":"Matthew Cook","orcid":"https://orcid.org/0000-0002-3331-9363"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"funder","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Matthew Cook","raw_affiliation_strings":["Institute of Neuroinformatics UZH/ETHZ, Zurich, Switzerland","Institute of Neuroinformatics UZH/ETHZ, Z\u00fcrich, Switzerland"],"affiliations":[{"raw_affiliation_string":"Institute of Neuroinformatics UZH/ETHZ, Zurich, Switzerland","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Institute of Neuroinformatics UZH/ETHZ, Z\u00fcrich, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5035652164","display_name":"Jan Funke","orcid":"https://orcid.org/0000-0003-4388-7783"},"institutions":[{"id":"https://openalex.org/I195573530","display_name":"Janelia Research Campus","ror":"https://ror.org/013sk6x84","country_code":"US","type":"facility","lineage":["https://openalex.org/I1344073410","https://openalex.org/I195573530"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jan Funke","raw_affiliation_strings":["HHMI Janelia Research Campus, Ashburn, USA"],"affiliations":[{"raw_affiliation_string":"HHMI Janelia Research Campus, Ashburn, USA","institution_ids":["https://openalex.org/I195573530"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5012550882"],"corresponding_institution_ids":["https://openalex.org/I12708293","https://openalex.org/I1344073410","https://openalex.org/I195573530"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.12,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"99","last_page":"108"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9929999709129333,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/voxel","display_name":"Voxel","score":0.7192975282669067},{"id":"https://openalex.org/keywords/microtubule","display_name":"Microtubule","score":0.6663591861724854},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5365275144577026},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5053303837776184},{"id":"https://openalex.org/keywords/tracking","display_name":"Tracking (education)","score":0.4829246699810028},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.4787004292011261},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.40151476860046387},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.39213815331459045},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.3547578454017639},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.3261779546737671},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.2641875743865967},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.17736151814460754}],"concepts":[{"id":"https://openalex.org/C54170458","wikidata":"https://www.wikidata.org/wiki/Q663554","display_name":"Voxel","level":2,"score":0.7192975282669067},{"id":"https://openalex.org/C20418707","wikidata":"https://www.wikidata.org/wiki/Q189933","display_name":"Microtubule","level":2,"score":0.6663591861724854},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5365275144577026},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5053303837776184},{"id":"https://openalex.org/C2775936607","wikidata":"https://www.wikidata.org/wiki/Q466845","display_name":"Tracking (education)","level":2,"score":0.4829246699810028},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.4787004292011261},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.40151476860046387},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.39213815331459045},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.3547578454017639},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.3261779546737671},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.2641875743865967},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.17736151814460754},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.0},{"id":"https://openalex.org/C19417346","wikidata":"https://www.wikidata.org/wiki/Q7922","display_name":"Pedagogy","level":1,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1007/978-3-030-59722-1_10","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-59722-1_10","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:arXiv.org:2009.08371","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2009.08371","pdf_url":"https://arxiv.org/pdf/2009.08371","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},{"id":"mag:3086680826","is_oa":true,"landing_page_url":"http://export.arxiv.org/pdf/2009.08371","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"arXiv (Cornell University)","raw_type":null},{"id":"doi:10.48550/arxiv.2009.08371","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2009.08371","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2009.08371","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2009.08371","pdf_url":"https://arxiv.org/pdf/2009.08371","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W1901129140","https://openalex.org/W2105615050","https://openalex.org/W2149374899","https://openalex.org/W2160041854","https://openalex.org/W2231099397","https://openalex.org/W2232480453","https://openalex.org/W2261263381","https://openalex.org/W2430091856","https://openalex.org/W2581591112","https://openalex.org/W2592023542","https://openalex.org/W2621042378","https://openalex.org/W2625278673","https://openalex.org/W2760861884","https://openalex.org/W2792634584","https://openalex.org/W2803790834","https://openalex.org/W2899476650","https://openalex.org/W2949124352","https://openalex.org/W2949808130","https://openalex.org/W2962948284","https://openalex.org/W2963585925","https://openalex.org/W2963659894","https://openalex.org/W2973403096","https://openalex.org/W2995555946","https://openalex.org/W3192718872","https://openalex.org/W6600302053"],"related_works":["https://openalex.org/W3093021273","https://openalex.org/W2165086505","https://openalex.org/W2171220448","https://openalex.org/W2045428587","https://openalex.org/W3107341168","https://openalex.org/W3110435512","https://openalex.org/W2119454020","https://openalex.org/W3199704289","https://openalex.org/W1594440326","https://openalex.org/W2039419520","https://openalex.org/W3195182164","https://openalex.org/W3164877266","https://openalex.org/W2031783639","https://openalex.org/W1793815080","https://openalex.org/W2618631269","https://openalex.org/W3098360176","https://openalex.org/W142171117","https://openalex.org/W2211222829","https://openalex.org/W3015436753","https://openalex.org/W2811305037"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
