{"id":"https://openalex.org/W3051570432","doi":"https://doi.org/10.1007/978-3-030-57821-3_34","title":"Enhanced Functional Pathway Annotations for Differentially Expressed Gene Clusters","display_name":"Enhanced Functional Pathway Annotations for Differentially Expressed Gene Clusters","publication_year":2020,"publication_date":"2020-01-01","ids":{"openalex":"https://openalex.org/W3051570432","doi":"https://doi.org/10.1007/978-3-030-57821-3_34","mag":"3051570432"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-57821-3_34","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-57821-3_34","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101644338","display_name":"Chun-Cheng Liu","orcid":"https://orcid.org/0000-0002-6801-5108"},"institutions":[{"id":"https://openalex.org/I153512688","display_name":"National Taiwan Ocean University","ror":"https://ror.org/03bvvnt49","country_code":"TW","type":"education","lineage":["https://openalex.org/I153512688"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Chun-Cheng Liu","raw_affiliation_strings":["Department of Computer Science and Engineering, National Taiwan Ocean University, Keelung, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, National Taiwan Ocean University, Keelung, Taiwan","institution_ids":["https://openalex.org/I153512688"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021450810","display_name":"Tao-Chuan Shih","orcid":"https://orcid.org/0000-0003-0583-0858"},"institutions":[{"id":"https://openalex.org/I118292597","display_name":"National Taipei University of Technology","ror":"https://ror.org/00cn92c09","country_code":"TW","type":"education","lineage":["https://openalex.org/I118292597"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Tao-Chuan Shih","raw_affiliation_strings":["Department of Computer Science and Information Engineering, National Taipei University of Technology, Taipei, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Information Engineering, National Taipei University of Technology, Taipei, Taiwan","institution_ids":["https://openalex.org/I118292597"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086428506","display_name":"Tun\u2010Wen Pai","orcid":"https://orcid.org/0000-0002-2869-4169"},"institutions":[{"id":"https://openalex.org/I118292597","display_name":"National Taipei University of Technology","ror":"https://ror.org/00cn92c09","country_code":"TW","type":"education","lineage":["https://openalex.org/I118292597"]},{"id":"https://openalex.org/I153512688","display_name":"National Taiwan Ocean University","ror":"https://ror.org/03bvvnt49","country_code":"TW","type":"education","lineage":["https://openalex.org/I153512688"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Tun-Wen Pai","raw_affiliation_strings":["Department of Computer Science and Engineering, National Taiwan Ocean University, Keelung, Taiwan","Department of Computer Science and Information Engineering, National Taipei University of Technology, Taipei, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, National Taiwan Ocean University, Keelung, Taiwan","institution_ids":["https://openalex.org/I153512688"]},{"raw_affiliation_string":"Department of Computer Science and Information Engineering, National Taipei University of Technology, Taipei, Taiwan","institution_ids":["https://openalex.org/I118292597"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060799491","display_name":"Chin\u2010Hwa Hu","orcid":"https://orcid.org/0000-0001-9582-2303"},"institutions":[{"id":"https://openalex.org/I153512688","display_name":"National Taiwan Ocean University","ror":"https://ror.org/03bvvnt49","country_code":"TW","type":"education","lineage":["https://openalex.org/I153512688"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Chin-Hwa Hu","raw_affiliation_strings":["Department of Bioscience and Biotechnology, National Taiwan Ocean University, Keelung, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Bioscience and Biotechnology, National Taiwan Ocean University, Keelung, Taiwan","institution_ids":["https://openalex.org/I153512688"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5062214754","display_name":"Lee-Jyi Wang","orcid":null},"institutions":[{"id":"https://openalex.org/I69729016","display_name":"Tungnan University","ror":"https://ror.org/05b7g7730","country_code":"TW","type":"education","lineage":["https://openalex.org/I69729016"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Lee-Jyi Wang","raw_affiliation_strings":["Deptartment of Information Technology, Tungnan University, New Taipei City, Taiwan"],"affiliations":[{"raw_affiliation_string":"Deptartment of Information Technology, Tungnan University, New Taipei City, Taiwan","institution_ids":["https://openalex.org/I69729016"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5101644338"],"corresponding_institution_ids":["https://openalex.org/I153512688"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.1570785,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"352","last_page":"363"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biological-pathway","display_name":"Biological pathway","score":0.793306827545166},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6320306658744812},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.6161011457443237},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6006112098693848},{"id":"https://openalex.org/keywords/ribosome-biogenesis","display_name":"Ribosome biogenesis","score":0.4578181505203247},{"id":"https://openalex.org/keywords/kegg","display_name":"KEGG","score":0.45745009183883667},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.43745994567871094},{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.4240306615829468},{"id":"https://openalex.org/keywords/biogenesis","display_name":"Biogenesis","score":0.4161022901535034},{"id":"https://openalex.org/keywords/fold-change","display_name":"Fold change","score":0.41186052560806274},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.4093981087207794},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3618900775909424},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.2610105276107788},{"id":"https://openalex.org/keywords/ribosome","display_name":"Ribosome","score":0.1641680896282196}],"concepts":[{"id":"https://openalex.org/C9927688","wikidata":"https://www.wikidata.org/wiki/Q4915012","display_name":"Biological pathway","level":4,"score":0.793306827545166},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6320306658744812},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6161011457443237},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6006112098693848},{"id":"https://openalex.org/C2779419633","wikidata":"https://www.wikidata.org/wiki/Q7322423","display_name":"Ribosome biogenesis","level":5,"score":0.4578181505203247},{"id":"https://openalex.org/C152724338","wikidata":"https://www.wikidata.org/wiki/Q909442","display_name":"KEGG","level":5,"score":0.45745009183883667},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.43745994567871094},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.4240306615829468},{"id":"https://openalex.org/C131934819","wikidata":"https://www.wikidata.org/wiki/Q135390","display_name":"Biogenesis","level":3,"score":0.4161022901535034},{"id":"https://openalex.org/C2779018089","wikidata":"https://www.wikidata.org/wiki/Q17014303","display_name":"Fold change","level":4,"score":0.41186052560806274},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.4093981087207794},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3618900775909424},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.2610105276107788},{"id":"https://openalex.org/C88478588","wikidata":"https://www.wikidata.org/wiki/Q42244","display_name":"Ribosome","level":4,"score":0.1641680896282196}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-030-57821-3_34","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-57821-3_34","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W1177212692","https://openalex.org/W2000859674","https://openalex.org/W2001324348","https://openalex.org/W2011629756","https://openalex.org/W2058839892","https://openalex.org/W2088499209","https://openalex.org/W2100305481","https://openalex.org/W2100980426","https://openalex.org/W2109196971","https://openalex.org/W2111397517","https://openalex.org/W2139834510","https://openalex.org/W2142033642","https://openalex.org/W2150303379","https://openalex.org/W2166546186","https://openalex.org/W2170752267","https://openalex.org/W2268769076","https://openalex.org/W2602955340","https://openalex.org/W2739999456"],"related_works":["https://openalex.org/W1515258209","https://openalex.org/W2030750127","https://openalex.org/W2068309125","https://openalex.org/W2737250971","https://openalex.org/W4377298897","https://openalex.org/W2918144038","https://openalex.org/W94196049","https://openalex.org/W2132025459","https://openalex.org/W2410504074","https://openalex.org/W4254903743"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
