{"id":"https://openalex.org/W3038908916","doi":"https://doi.org/10.1007/978-3-030-49778-1_16","title":"Application of Agent-Based Modelling to Simulate Ribosome Translation","display_name":"Application of Agent-Based Modelling to Simulate Ribosome Translation","publication_year":2020,"publication_date":"2020-01-01","ids":{"openalex":"https://openalex.org/W3038908916","doi":"https://doi.org/10.1007/978-3-030-49778-1_16","mag":"3038908916"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-49778-1_16","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-49778-1_16","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5057813067","display_name":"Gael P\u00e9rez\u2010Rodr\u00edguez","orcid":"https://orcid.org/0000-0001-6740-3742"},"institutions":[{"id":"https://openalex.org/I4210158352","display_name":"Servicio Gallego de Salud","ror":"https://ror.org/0591s4t67","country_code":"ES","type":"healthcare","lineage":["https://openalex.org/I4210158352"]},{"id":"https://openalex.org/I6289922","display_name":"Universidade de Vigo","ror":"https://ror.org/05rdf8595","country_code":"ES","type":"education","lineage":["https://openalex.org/I6289922"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Gael P\u00e9rez-Rodr\u00edguez","raw_affiliation_strings":["CINBIO, The Biomedical Research Centre, University of Vigo, Campus Univesitario Lagoas-Marcosende, 36310, Vigo, Spain","ESEI, Department of Computer Science, University of Vigo, Edificio Polit\u00e9cnico, Campus Universitario As Lagoas s/n, 32004, Ourense, Spain","SING, Next Generation Computer Systems Group, Galicia Sur Health Research Institute, SERGAS-UVIGO, Vigo, Spain"],"raw_orcid":"https://orcid.org/0000-0001-6740-3742","affiliations":[{"raw_affiliation_string":"CINBIO, The Biomedical Research Centre, University of Vigo, Campus Univesitario Lagoas-Marcosende, 36310, Vigo, Spain","institution_ids":["https://openalex.org/I6289922"]},{"raw_affiliation_string":"ESEI, Department of Computer Science, University of Vigo, Edificio Polit\u00e9cnico, Campus Universitario As Lagoas s/n, 32004, Ourense, Spain","institution_ids":["https://openalex.org/I6289922"]},{"raw_affiliation_string":"SING, Next Generation Computer Systems Group, Galicia Sur Health Research Institute, SERGAS-UVIGO, Vigo, Spain","institution_ids":["https://openalex.org/I4210158352"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052725708","display_name":"Beatriz T. Magalh\u00e3es","orcid":"https://orcid.org/0000-0003-4434-6989"},"institutions":[{"id":"https://openalex.org/I182534213","display_name":"Universidade do Porto","ror":"https://ror.org/043pwc612","country_code":"PT","type":"education","lineage":["https://openalex.org/I182534213"]},{"id":"https://openalex.org/I4210158352","display_name":"Servicio Gallego de Salud","ror":"https://ror.org/0591s4t67","country_code":"ES","type":"healthcare","lineage":["https://openalex.org/I4210158352"]},{"id":"https://openalex.org/I6289922","display_name":"Universidade de Vigo","ror":"https://ror.org/05rdf8595","country_code":"ES","type":"education","lineage":["https://openalex.org/I6289922"]}],"countries":["ES","PT"],"is_corresponding":false,"raw_author_name":"Beatriz T. Magalh\u00e3es","raw_affiliation_strings":["ESEI, Department of Computer Science, University of Vigo, Edificio Polit\u00e9cnico, Campus Universitario As Lagoas s/n, 32004, Ourense, Spain","LEPABE, Department of Chemical Engineering, Faculty of Engineering, University of Porto, Rua Dr. Roberto Frias, 4200-465, Porto, Portugal","SING, Next Generation Computer Systems Group, Galicia Sur Health Research Institute, SERGAS-UVIGO, Vigo, Spain"],"raw_orcid":"https://orcid.org/0000-0003-4434-6989","affiliations":[{"raw_affiliation_string":"ESEI, Department of Computer Science, University of Vigo, Edificio Polit\u00e9cnico, Campus Universitario As Lagoas s/n, 32004, Ourense, Spain","institution_ids":["https://openalex.org/I6289922"]},{"raw_affiliation_string":"LEPABE, Department of Chemical Engineering, Faculty of Engineering, University of Porto, Rua Dr. Roberto Frias, 4200-465, Porto, Portugal","institution_ids":["https://openalex.org/I182534213"]},{"raw_affiliation_string":"SING, Next Generation Computer Systems Group, Galicia Sur Health Research Institute, SERGAS-UVIGO, Vigo, Spain","institution_ids":["https://openalex.org/I4210158352"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035712663","display_name":"Nuno F. Azevedo","orcid":"https://orcid.org/0000-0001-5864-3250"},"institutions":[{"id":"https://openalex.org/I182534213","display_name":"Universidade do Porto","ror":"https://ror.org/043pwc612","country_code":"PT","type":"education","lineage":["https://openalex.org/I182534213"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Nuno F. Azevedo","raw_affiliation_strings":["LEPABE, Department of Chemical Engineering, Faculty of Engineering, University of Porto, Rua Dr. Roberto Frias, 4200-465, Porto, Portugal"],"raw_orcid":"https://orcid.org/0000-0001-5864-3250","affiliations":[{"raw_affiliation_string":"LEPABE, Department of Chemical Engineering, Faculty of Engineering, University of Porto, Rua Dr. Roberto Frias, 4200-465, Porto, Portugal","institution_ids":["https://openalex.org/I182534213"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5033016354","display_name":"An\u00e1lia Louren\u00e7o","orcid":"https://orcid.org/0000-0001-8401-5362"},"institutions":[{"id":"https://openalex.org/I4210158352","display_name":"Servicio Gallego de Salud","ror":"https://ror.org/0591s4t67","country_code":"ES","type":"healthcare","lineage":["https://openalex.org/I4210158352"]},{"id":"https://openalex.org/I6289922","display_name":"Universidade de Vigo","ror":"https://ror.org/05rdf8595","country_code":"ES","type":"education","lineage":["https://openalex.org/I6289922"]},{"id":"https://openalex.org/I99682543","display_name":"University of Minho","ror":"https://ror.org/037wpkx04","country_code":"PT","type":"education","lineage":["https://openalex.org/I99682543"]}],"countries":["ES","PT"],"is_corresponding":false,"raw_author_name":"An\u00e1lia Louren\u00e7o","raw_affiliation_strings":["CEB, Centre of Biological Engineering, University of Minho, Campus de Gualtar, 4710-057, Braga, Portugal","CINBIO, The Biomedical Research Centre, University of Vigo, Campus Univesitario Lagoas-Marcosende, 36310, Vigo, Spain","ESEI, Department of Computer Science, University of Vigo, Edificio Polit\u00e9cnico, Campus Universitario As Lagoas s/n, 32004, Ourense, Spain","SING, Next Generation Computer Systems Group, Galicia Sur Health Research Institute, SERGAS-UVIGO, Vigo, Spain"],"raw_orcid":"https://orcid.org/0000-0001-8401-5362","affiliations":[{"raw_affiliation_string":"CEB, Centre of Biological Engineering, University of Minho, Campus de Gualtar, 4710-057, Braga, Portugal","institution_ids":["https://openalex.org/I99682543"]},{"raw_affiliation_string":"CINBIO, The Biomedical Research Centre, University of Vigo, Campus Univesitario Lagoas-Marcosende, 36310, Vigo, Spain","institution_ids":["https://openalex.org/I6289922"]},{"raw_affiliation_string":"ESEI, Department of Computer Science, University of Vigo, Edificio Polit\u00e9cnico, Campus Universitario As Lagoas s/n, 32004, Ourense, Spain","institution_ids":["https://openalex.org/I6289922"]},{"raw_affiliation_string":"SING, Next Generation Computer Systems Group, Galicia Sur Health Research Institute, SERGAS-UVIGO, Vigo, Spain","institution_ids":["https://openalex.org/I4210158352"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5057813067"],"corresponding_institution_ids":["https://openalex.org/I4210158352","https://openalex.org/I6289922"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.11228191,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"200","last_page":"211"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13220","display_name":"Plant and Fungal Interactions Research","score":0.9244999885559082,"subfield":{"id":"https://openalex.org/subfields/1310","display_name":"Endocrinology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10494","display_name":"Plant Virus Research Studies","score":0.9243000149726868,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/translation","display_name":"Translation (biology)","score":0.7514758110046387},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7082245945930481},{"id":"https://openalex.org/keywords/yeast","display_name":"Yeast","score":0.5407604575157166},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.45276394486427307},{"id":"https://openalex.org/keywords/biochemical-engineering","display_name":"Biochemical engineering","score":0.41580551862716675},{"id":"https://openalex.org/keywords/saccharomyces-cerevisiae","display_name":"Saccharomyces cerevisiae","score":0.41054093837738037},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3386354446411133},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.3243306875228882},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.18878254294395447},{"id":"https://openalex.org/keywords/messenger-rna","display_name":"Messenger RNA","score":0.15593522787094116},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.15515318512916565},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.10818672180175781},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.07784724235534668},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.07247745990753174},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.0626102089881897}],"concepts":[{"id":"https://openalex.org/C149364088","wikidata":"https://www.wikidata.org/wiki/Q185917","display_name":"Translation (biology)","level":4,"score":0.7514758110046387},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7082245945930481},{"id":"https://openalex.org/C2779222958","wikidata":"https://www.wikidata.org/wiki/Q45422","display_name":"Yeast","level":2,"score":0.5407604575157166},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.45276394486427307},{"id":"https://openalex.org/C183696295","wikidata":"https://www.wikidata.org/wiki/Q2487696","display_name":"Biochemical engineering","level":1,"score":0.41580551862716675},{"id":"https://openalex.org/C2777576037","wikidata":"https://www.wikidata.org/wiki/Q719725","display_name":"Saccharomyces cerevisiae","level":3,"score":0.41054093837738037},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3386354446411133},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.3243306875228882},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.18878254294395447},{"id":"https://openalex.org/C105580179","wikidata":"https://www.wikidata.org/wiki/Q188928","display_name":"Messenger RNA","level":3,"score":0.15593522787094116},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.15515318512916565},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.10818672180175781},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.07784724235534668},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.07247745990753174},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0626102089881897}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/978-3-030-49778-1_16","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-49778-1_16","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:repositorium.sdum.uminho.pt:1822/74510","is_oa":false,"landing_page_url":"http://hdl.handle.net/1822/74510","pdf_url":null,"source":{"id":"https://openalex.org/S4306400354","display_name":"Reposit\u00f3riUM (Universidade do Minho)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I99682543","host_organization_name":"University of Minho","host_organization_lineage":["https://openalex.org/I99682543"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":null},{"id":"pmh:oai:repositorium.uminho.pt:1822/74510","is_oa":false,"landing_page_url":"https://hdl.handle.net/1822/74510","pdf_url":null,"source":{"id":"https://openalex.org/S4306402433","display_name":"Portuguese National Funding Agency for Science, Research and Technology (RCAAP Project by FCT)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"conference paper"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.4099999964237213,"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W830547093","https://openalex.org/W882079558","https://openalex.org/W1511064218","https://openalex.org/W1582239212","https://openalex.org/W2024734969","https://openalex.org/W2059639708","https://openalex.org/W2081545937","https://openalex.org/W2094179288","https://openalex.org/W2099102671","https://openalex.org/W2128149907","https://openalex.org/W2140862057","https://openalex.org/W2144244247","https://openalex.org/W2145408484","https://openalex.org/W2147837708","https://openalex.org/W2326595057","https://openalex.org/W2787534826","https://openalex.org/W2790287472","https://openalex.org/W2808756922","https://openalex.org/W2888859139","https://openalex.org/W2901641734","https://openalex.org/W2918941244","https://openalex.org/W2997449405","https://openalex.org/W3100735320","https://openalex.org/W4248015671","https://openalex.org/W4252039878"],"related_works":["https://openalex.org/W4315558101","https://openalex.org/W261727187","https://openalex.org/W4240624121","https://openalex.org/W2028107853","https://openalex.org/W1982584572","https://openalex.org/W4232406862","https://openalex.org/W4210617669","https://openalex.org/W2397070560","https://openalex.org/W4306842392","https://openalex.org/W1969033266"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-05-15T08:27:34.491423","created_date":"2025-10-10T00:00:00"}
