{"id":"https://openalex.org/W3022037730","doi":"https://doi.org/10.1007/978-3-030-46165-2_7","title":"Deep Learning of CTCF-Mediated Chromatin Loops in 3D Genome Organization","display_name":"Deep Learning of CTCF-Mediated Chromatin Loops in 3D Genome Organization","publication_year":2020,"publication_date":"2020-01-01","ids":{"openalex":"https://openalex.org/W3022037730","doi":"https://doi.org/10.1007/978-3-030-46165-2_7","mag":"3022037730"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-46165-2_7","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-46165-2_7","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5008337702","display_name":"Shuzhen Kuang","orcid":"https://orcid.org/0009-0008-3844-3647"},"institutions":[{"id":"https://openalex.org/I8078737","display_name":"Clemson University","ror":"https://ror.org/037s24f05","country_code":"US","type":"education","lineage":["https://openalex.org/I8078737"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shuzhen Kuang","raw_affiliation_strings":["Department of Biological Sciences, Clemson University, Clemson, SC, 29634, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biological Sciences, Clemson University, Clemson, SC, 29634, USA","institution_ids":["https://openalex.org/I8078737"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5080695941","display_name":"Liangjiang Wang","orcid":"https://orcid.org/0000-0002-6316-7962"},"institutions":[{"id":"https://openalex.org/I8078737","display_name":"Clemson University","ror":"https://ror.org/037s24f05","country_code":"US","type":"education","lineage":["https://openalex.org/I8078737"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Liangjiang Wang","raw_affiliation_strings":["Department of Genetics and Biochemistry, Clemson University, Clemson, SC, 29634, USA"],"affiliations":[{"raw_affiliation_string":"Department of Genetics and Biochemistry, Clemson University, Clemson, SC, 29634, USA","institution_ids":["https://openalex.org/I8078737"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5080695941"],"corresponding_institution_ids":["https://openalex.org/I8078737"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.3936,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.58594698,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"77","last_page":"89"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ctcf","display_name":"CTCF","score":0.9771444797515869},{"id":"https://openalex.org/keywords/chromatin","display_name":"Chromatin","score":0.9132734537124634},{"id":"https://openalex.org/keywords/chia-pet","display_name":"ChIA-PET","score":0.624015212059021},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6165167689323425},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.47714826464653015},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.45595434308052063},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4497700035572052},{"id":"https://openalex.org/keywords/sequence-motif","display_name":"Sequence motif","score":0.43802890181541443},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4209061861038208},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.4092443287372589},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.28190305829048157},{"id":"https://openalex.org/keywords/chromatin-remodeling","display_name":"Chromatin remodeling","score":0.2309356927871704},{"id":"https://openalex.org/keywords/transcription-factor","display_name":"Transcription factor","score":0.20575088262557983}],"concepts":[{"id":"https://openalex.org/C2778760011","wikidata":"https://www.wikidata.org/wiki/Q21163346","display_name":"CTCF","level":5,"score":0.9771444797515869},{"id":"https://openalex.org/C83640560","wikidata":"https://www.wikidata.org/wiki/Q180951","display_name":"Chromatin","level":3,"score":0.9132734537124634},{"id":"https://openalex.org/C67258246","wikidata":"https://www.wikidata.org/wiki/Q5065897","display_name":"ChIA-PET","level":5,"score":0.624015212059021},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6165167689323425},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.47714826464653015},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.45595434308052063},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4497700035572052},{"id":"https://openalex.org/C117745874","wikidata":"https://www.wikidata.org/wiki/Q901612","display_name":"Sequence motif","level":3,"score":0.43802890181541443},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4209061861038208},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.4092443287372589},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.28190305829048157},{"id":"https://openalex.org/C167227067","wikidata":"https://www.wikidata.org/wiki/Q5113739","display_name":"Chromatin remodeling","level":4,"score":0.2309356927871704},{"id":"https://openalex.org/C86339819","wikidata":"https://www.wikidata.org/wiki/Q407384","display_name":"Transcription factor","level":3,"score":0.20575088262557983},{"id":"https://openalex.org/C111936080","wikidata":"https://www.wikidata.org/wiki/Q913367","display_name":"Enhancer","level":4,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-030-46165-2_7","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-46165-2_7","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":36,"referenced_works":["https://openalex.org/W1922881706","https://openalex.org/W1941076503","https://openalex.org/W1964733653","https://openalex.org/W1973062929","https://openalex.org/W1985621639","https://openalex.org/W2020541351","https://openalex.org/W2064675550","https://openalex.org/W2070021921","https://openalex.org/W2090037139","https://openalex.org/W2115685806","https://openalex.org/W2131453083","https://openalex.org/W2140952049","https://openalex.org/W2143067946","https://openalex.org/W2148802440","https://openalex.org/W2157009395","https://openalex.org/W2158266834","https://openalex.org/W2189149359","https://openalex.org/W2195190137","https://openalex.org/W2223041743","https://openalex.org/W2247766769","https://openalex.org/W2303393194","https://openalex.org/W2333286569","https://openalex.org/W2336509392","https://openalex.org/W2345512687","https://openalex.org/W2517194566","https://openalex.org/W2530292798","https://openalex.org/W2614144400","https://openalex.org/W2736042082","https://openalex.org/W2756900458","https://openalex.org/W2792734199","https://openalex.org/W2799593901","https://openalex.org/W2919115771","https://openalex.org/W2921983621","https://openalex.org/W2945883730","https://openalex.org/W2950577311","https://openalex.org/W2952935243"],"related_works":["https://openalex.org/W4220758050","https://openalex.org/W2898514070","https://openalex.org/W2008077261","https://openalex.org/W3191994734","https://openalex.org/W2037920273","https://openalex.org/W4214521951","https://openalex.org/W4241694212","https://openalex.org/W2125397535","https://openalex.org/W4234876096","https://openalex.org/W3040477867"],"abstract_inverted_index":null,"counts_by_year":[{"year":2020,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
