{"id":"https://openalex.org/W2999953609","doi":"https://doi.org/10.1007/978-3-030-45442-5_54","title":"DSR: A Collection for the Evaluation of Graded Disease-Symptom Relations","display_name":"DSR: A Collection for the Evaluation of Graded Disease-Symptom Relations","publication_year":2020,"publication_date":"2020-01-01","ids":{"openalex":"https://openalex.org/W2999953609","doi":"https://doi.org/10.1007/978-3-030-45442-5_54","mag":"2999953609"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-45442-5_54","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-030-45442-5_54","pdf_url":"https://link.springer.com/content/pdf/10.1007%2F978-3-030-45442-5_54.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["arxiv","crossref","datacite"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://link.springer.com/content/pdf/10.1007%2F978-3-030-45442-5_54.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5028806795","display_name":"Markus Zlabinger","orcid":"https://orcid.org/0000-0003-2733-3043"},"institutions":[{"id":"https://openalex.org/I145847075","display_name":"TU Wien","ror":"https://ror.org/04d836q62","country_code":"AT","type":"education","lineage":["https://openalex.org/I145847075"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Markus Zlabinger","raw_affiliation_strings":["TU Wien, Vienna, Austria"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"TU Wien, Vienna, Austria","institution_ids":["https://openalex.org/I145847075"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089466895","display_name":"Sebastian Hofst\u00e4tter","orcid":"https://orcid.org/0009-0006-1229-2612"},"institutions":[{"id":"https://openalex.org/I145847075","display_name":"TU Wien","ror":"https://ror.org/04d836q62","country_code":"AT","type":"education","lineage":["https://openalex.org/I145847075"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Sebastian Hofst\u00e4tter","raw_affiliation_strings":["TU Wien, Vienna, Austria"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"TU Wien, Vienna, Austria","institution_ids":["https://openalex.org/I145847075"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017877491","display_name":"Navid Rekabsaz","orcid":"https://orcid.org/0000-0001-5764-8738"},"institutions":[{"id":"https://openalex.org/I121883995","display_name":"Johannes Kepler University of Linz","ror":"https://ror.org/052r2xn60","country_code":"AT","type":"education","lineage":["https://openalex.org/I121883995"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Navid Rekabsaz","raw_affiliation_strings":["Johannes Kepler University, Linz, Austria"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Johannes Kepler University, Linz, Austria","institution_ids":["https://openalex.org/I121883995"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5020665735","display_name":"Allan Hanbury","orcid":"https://orcid.org/0000-0002-7149-5843"},"institutions":[{"id":"https://openalex.org/I145847075","display_name":"TU Wien","ror":"https://ror.org/04d836q62","country_code":"AT","type":"education","lineage":["https://openalex.org/I145847075"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Allan Hanbury","raw_affiliation_strings":["TU Wien, Vienna, Austria"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"TU Wien, Vienna, Austria","institution_ids":["https://openalex.org/I145847075"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":{"value":5000,"currency":"EUR","value_usd":5392},"fwci":null,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"433","last_page":"440"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13083","display_name":"Advanced Text Analysis Techniques","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/recall","display_name":"Recall","score":0.7272407412528992},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5904483199119568},{"id":"https://openalex.org/keywords/data-collection","display_name":"Data collection","score":0.5745208859443665},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.5470077991485596},{"id":"https://openalex.org/keywords/relation","display_name":"Relation (database)","score":0.5278950333595276},{"id":"https://openalex.org/keywords/relationship-extraction","display_name":"Relationship extraction","score":0.45966729521751404},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.45239630341529846},{"id":"https://openalex.org/keywords/medical-record","display_name":"Medical record","score":0.4208008646965027},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.33528560400009155},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.26163625717163086},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.25162938237190247},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.2306307554244995},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.14481452107429504},{"id":"https://openalex.org/keywords/cognitive-psychology","display_name":"Cognitive psychology","score":0.1175554096698761},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.10529002547264099},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.08941355347633362}],"concepts":[{"id":"https://openalex.org/C100660578","wikidata":"https://www.wikidata.org/wiki/Q18733","display_name":"Recall","level":2,"score":0.7272407412528992},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5904483199119568},{"id":"https://openalex.org/C133462117","wikidata":"https://www.wikidata.org/wiki/Q4929239","display_name":"Data collection","level":2,"score":0.5745208859443665},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.5470077991485596},{"id":"https://openalex.org/C25343380","wikidata":"https://www.wikidata.org/wiki/Q277521","display_name":"Relation (database)","level":2,"score":0.5278950333595276},{"id":"https://openalex.org/C153604712","wikidata":"https://www.wikidata.org/wiki/Q7310755","display_name":"Relationship extraction","level":3,"score":0.45966729521751404},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.45239630341529846},{"id":"https://openalex.org/C195910791","wikidata":"https://www.wikidata.org/wiki/Q1324077","display_name":"Medical record","level":2,"score":0.4208008646965027},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.33528560400009155},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.26163625717163086},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.25162938237190247},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.2306307554244995},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.14481452107429504},{"id":"https://openalex.org/C180747234","wikidata":"https://www.wikidata.org/wiki/Q23373","display_name":"Cognitive psychology","level":1,"score":0.1175554096698761},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.10529002547264099},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.08941355347633362},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1007/978-3-030-45442-5_54","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-030-45442-5_54","pdf_url":"https://link.springer.com/content/pdf/10.1007%2F978-3-030-45442-5_54.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:arXiv.org:2001.05357","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2001.05357","pdf_url":"https://arxiv.org/pdf/2001.05357","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},{"id":"mag:2999953609","is_oa":true,"landing_page_url":"https://arxiv.org/pdf/2001.05357.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"arXiv (Cornell University)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:7148057","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7148057","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Advances in Information Retrieval","raw_type":"Text"},{"id":"doi:10.48550/arxiv.2001.05357","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2001.05357","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Preprint"}],"best_oa_location":{"id":"doi:10.1007/978-3-030-45442-5_54","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-030-45442-5_54","pdf_url":"https://link.springer.com/content/pdf/10.1007%2F978-3-030-45442-5_54.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2999953609.pdf","grobid_xml":"https://content.openalex.org/works/W2999953609.grobid-xml"},"referenced_works_count":14,"referenced_works":["https://openalex.org/W1550258693","https://openalex.org/W1975879668","https://openalex.org/W2041073071","https://openalex.org/W2045334584","https://openalex.org/W2069870183","https://openalex.org/W2153579005","https://openalex.org/W2164777277","https://openalex.org/W2250573263","https://openalex.org/W2251571525","https://openalex.org/W2772094226","https://openalex.org/W2906735762","https://openalex.org/W2942160283","https://openalex.org/W2949711156","https://openalex.org/W3098901423"],"related_works":["https://openalex.org/W3017389696","https://openalex.org/W2773297340","https://openalex.org/W2960917904","https://openalex.org/W2971066408","https://openalex.org/W3006347817","https://openalex.org/W2748383684","https://openalex.org/W2911375267","https://openalex.org/W2023502360","https://openalex.org/W51263609","https://openalex.org/W2788477667","https://openalex.org/W4229335055","https://openalex.org/W3007499205","https://openalex.org/W2787223144","https://openalex.org/W2766297643","https://openalex.org/W3164362281","https://openalex.org/W3208426488","https://openalex.org/W3207128852","https://openalex.org/W2937863155","https://openalex.org/W2146179090","https://openalex.org/W2945509974"],"abstract_inverted_index":{"The":[0,101,142],"effective":[1],"extraction":[2,31],"of":[3,22,52,114,116,139,150,156],"ranked":[4],"disease-symptom":[5,29],"relationships":[6],"is":[7,45,104],"a":[8],"critical":[9],"component":[10],"in":[11,38,98,127,154],"various":[12,40],"medical":[13,17,41,117,140],"tasks,":[14,42],"including":[15],"computer-assisted":[16],"diagnosis":[18],"or":[19],"the":[20,36,39,50,60,95,110,120,136,145,148,151],"discovery":[21],"unexpected":[23],"associations":[24],"between":[25,81],"diseases.":[26],"While":[27],"existing":[28],"relationship":[30],"methods":[32,96],"are":[33,132],"used":[34,97],"as":[35,69],"foundation":[37],"no":[43],"collection":[44],"available":[46],"to":[47],"systematically":[48],"evaluate":[49],"performance":[51],"such":[53],"methods.":[54],"In":[55],"this":[56],"paper,":[57],"we":[58,88,123],"introduce":[59],"Disease-Symptom":[61],"Relation":[62],"Collection":[63],"(dsr-collection),":[64],"created":[65],"by":[66,79],"five":[67],"physicians":[68],"expert":[70],"annotators.":[71],"We":[72],"provide":[73,89],"graded":[74],"symptom":[75],"judgments":[76],"for":[77],"diseases":[78],"differentiating":[80],"relevant":[82],"symptoms":[83],"and":[84,109,159],"primary":[85],"symptoms.":[86],"Further,":[87],"several":[90],"strong":[91],"baselines,":[92],"based":[93,105],"on":[94,106,112,144],"previous":[99],"studies.":[100],"first":[102],"method":[103],"word":[107],"embeddings,":[108],"second":[111],"co-occurrences":[113],"MeSH-keywords":[115],"articles.":[118,141],"For":[119],"co-occurrence":[121],"method,":[122],"propose":[124],"an":[125],"adaption":[126,153],"which":[128],"not":[129],"only":[130],"keywords":[131],"considered,":[133],"but":[134],"also":[135],"full":[137],"text":[138],"evaluation":[143],"dsr-collection":[146],"shows":[147],"effectiveness":[149],"proposed":[152],"terms":[155],"nDCG,":[157],"precision,":[158],"recall.":[160]},"counts_by_year":[],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
